RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 PANK2Q9BZ23 570 aa9.73□□□□□ -0.85
PTPN20-216ENST00000506080 ZDHHC5Q9C0B5 715 aa9.73□□□□□ -0.85
PTPN20-216ENST00000506080 TM7SF3Q9NS93 570 aa9.73□□□□□ -0.85
PTPN20-216ENST00000506080 PANK4Q9NVE7 773 aa9.73□□□□□ -0.85
PTPN20-216ENST00000506080 WSB2Q9NYS7 404 aaPredicted RBP9.73□□□□□ -0.85
PTPN20-216ENST00000506080 HSPBP1Q9NZL4 362 aa9.73□□□□□ -0.85
PTPN20-216ENST00000506080 NXF1Q9UBU9 619 aaKnown RBP9.73□□□□□ -0.85
PTPN20-216ENST00000506080 KIAA0391O15091 583 aaKnown RBP9.72□□□□□ -0.85
PTPN20-216ENST00000506080 CACNG3O60359 315 aa9.72□□□□□ -0.85
PTPN20-216ENST00000506080 CILPO75339 1184 aa9.72□□□□□ -0.85
PTPN20-216ENST00000506080 CLSTN1O94985 981 aa9.72□□□□□ -0.85
PTPN20-216ENST00000506080 TBX18O95935 607 aa9.72□□□□□ -0.85
PTPN20-216ENST00000506080 MATKP42679 507 aa9.72□□□□□ -0.85
PTPN20-216ENST00000506080 DGKGP49619 791 aa9.72□□□□□ -0.85
PTPN20-216ENST00000506080 DCAF12L1Q5VU92 463 aa9.72□□□□□ -0.85
PTPN20-216ENST00000506080 SNX30Q5VWJ9 437 aa9.72□□□□□ -0.85
PTPN20-216ENST00000506080 TMPRSS7Q7RTY8 843 aa9.72□□□□□ -0.85
PTPN20-216ENST00000506080 RHBDD1Q8TEB9 315 aa9.72□□□□□ -0.85
PTPN20-216ENST00000506080 DNASE2BQ8WZ79 361 aa9.72□□□□□ -0.85
PTPN20-216ENST00000506080 HPS3Q969F9 1004 aa9.72□□□□□ -0.85
PTPN20-216ENST00000506080 TMX3Q96JJ7 454 aa9.72□□□□□ -0.85
PTPN20-216ENST00000506080 PLK2Q9NYY3 685 aa9.72□□□□□ -0.85
PTPN20-216ENST00000506080 KIAA1522Q9P206 1035 aaPredicted RBP9.72□□□□□ -0.85
PTPN20-216ENST00000506080 FNDC3AQ9Y2H6 1198 aaKnown RBP9.72□□□□□ -0.85
PTPN20-216ENST00000506080 CLIC4Q9Y696 253 aa9.72□□□□□ -0.85
PTPN20-216ENST00000506080 PTPRBP23467 1997 aa9.72□□□□□ -0.85
PTPN20-216ENST00000506080 CELSR3Q9NYQ7 3312 aa9.71□□□□□ -0.85
PTPN20-216ENST00000506080 ATP8B3O60423 1300 aa9.71□□□□□ -0.85
PTPN20-216ENST00000506080 FRMD3A2A2Y4 597 aa9.71□□□□□ -0.86
PTPN20-216ENST00000506080 FAM149AA5PLN7 773 aa9.71□□□□□ -0.86
PTPN20-216ENST00000506080 TRABD2BA6NFA1 517 aa9.71□□□□□ -0.86
PTPN20-216ENST00000506080 KCNJ18B7U540 433 aa9.71□□□□□ -0.86
PTPN20-216ENST00000506080 BCAT2O15382 392 aaPredicted RBP9.71□□□□□ -0.86
PTPN20-216ENST00000506080 GREM1O60565 184 aa9.71□□□□□ -0.86
PTPN20-216ENST00000506080 TLR5O60602 858 aa9.71□□□□□ -0.86
PTPN20-216ENST00000506080 AP1G2O75843 785 aa9.71□□□□□ -0.86
PTPN20-216ENST00000506080 CER1O95813 267 aa9.71□□□□□ -0.86
PTPN20-216ENST00000506080 PRB1P04280 392 aa9.71□□□□□ -0.86
PTPN20-216ENST00000506080 CISD3P0C7P0 127 aa9.71□□□□□ -0.86
PTPN20-216ENST00000506080 ZDHHC11BP0C7U3 371 aa9.71□□□□□ -0.86
PTPN20-216ENST00000506080 CCNYL3P0C7X3 344 aa9.71□□□□□ -0.86
PTPN20-216ENST00000506080 TXLNAP40222 546 aa9.71□□□□□ -0.86
PTPN20-216ENST00000506080 TUBP50607 506 aa9.71□□□□□ -0.86
PTPN20-216ENST00000506080 CDH8P55286 799 aa9.71□□□□□ -0.86
PTPN20-216ENST00000506080 MYL6P60660 151 aa9.71□□□□□ -0.86
PTPN20-216ENST00000506080 BNC1Q01954 994 aa9.71□□□□□ -0.86
PTPN20-216ENST00000506080 TRPC3Q13507 836 aa9.71□□□□□ -0.86
PTPN20-216ENST00000506080 HLA-BQ31612 363 aa9.71□□□□□ -0.86
PTPN20-216ENST00000506080 FUT11Q495W5 492 aa9.71□□□□□ -0.86
PTPN20-216ENST00000506080 CCDC157Q569K6 752 aa9.71□□□□□ -0.86
PTPN20-216ENST00000506080 LARP1BQ659C4 914 aaKnown RBP9.71□□□□□ -0.86
PTPN20-216ENST00000506080 SCARA5Q6ZMJ2 495 aa9.71□□□□□ -0.86
PTPN20-216ENST00000506080 PAQR9Q6ZVX9 377 aa9.71□□□□□ -0.86
PTPN20-216ENST00000506080 HTR3DQ70Z44 454 aa9.71□□□□□ -0.86
PTPN20-216ENST00000506080 BRAPQ7Z569 592 aa9.71□□□□□ -0.86
PTPN20-216ENST00000506080 CACUL1Q86Y37 369 aa9.71□□□□□ -0.86
PTPN20-216ENST00000506080 PRR7Q8TB68 274 aa9.71□□□□□ -0.86
PTPN20-216ENST00000506080 ADAM32Q8TC27 787 aa9.71□□□□□ -0.86
PTPN20-216ENST00000506080 ELMO3Q96BJ8 720 aa9.71□□□□□ -0.86
PTPN20-216ENST00000506080 CCDC127Q96BQ5 260 aa9.71□□□□□ -0.86
PTPN20-216ENST00000506080 CGRRF1Q99675 332 aa9.71□□□□□ -0.86
PTPN20-216ENST00000506080 DUSP9Q99956 384 aaKnown RBP9.71□□□□□ -0.86
PTPN20-216ENST00000506080 KLF16Q9BXK1 252 aaPredicted RBP9.71□□□□□ -0.86
PTPN20-216ENST00000506080 MKRN2Q9H000 416 aaKnown RBP9.71□□□□□ -0.86
PTPN20-216ENST00000506080 SMYD3Q9H7B4 428 aa9.71□□□□□ -0.86
PTPN20-216ENST00000506080 DMAP1Q9NPF5 467 aaPredicted RBP9.71□□□□□ -0.86
PTPN20-216ENST00000506080 WDR35Q9P2L0 1181 aa9.71□□□□□ -0.86
PTPN20-216ENST00000506080 FBXO2Q9UK22 296 aaPredicted RBP9.71□□□□□ -0.86
PTPN20-216ENST00000506080 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.71□□□□□ -0.86
PTPN20-216ENST00000506080 SMC3Q9UQE7 1217 aa9.71□□□□□ -0.86
PTPN20-216ENST00000506080 STON1Q9Y6Q2 735 aa9.71□□□□□ -0.86
PTPN20-216ENST00000506080 APC2O95996 2303 aa9.71□□□□□ -0.86
PTPN20-216ENST00000506080 ACACAQ13085 2346 aa9.71□□□□□ -0.86
PTPN20-216ENST00000506080 IGSF10Q6WRI0 2623 aa9.7□□□□□ -0.86
PTPN20-216ENST00000506080 GCN1Q92616 2671 aaKnown RBP9.7□□□□□ -0.86
PTPN20-216ENST00000506080 A0A087X0B3 334 aa9.7□□□□□ -0.86
PTPN20-216ENST00000506080 A0A1B0GVT2 93 aa9.7□□□□□ -0.86
PTPN20-216ENST00000506080 GFRA2O00451 464 aa9.7□□□□□ -0.86
PTPN20-216ENST00000506080 MDM4O15151 490 aa9.7□□□□□ -0.86
PTPN20-216ENST00000506080 CLIC2O15247 247 aa9.7□□□□□ -0.86
PTPN20-216ENST00000506080 BEST1O76090 585 aa9.7□□□□□ -0.86
PTPN20-216ENST00000506080 FAM163BP0C2L3 166 aa9.7□□□□□ -0.86
PTPN20-216ENST00000506080 ZNF883P0CG24 379 aa9.7□□□□□ -0.86
PTPN20-216ENST00000506080 STAT6P42226 847 aa9.7□□□□□ -0.86
PTPN20-216ENST00000506080 IL12RB1P42701 662 aa9.7□□□□□ -0.86
PTPN20-216ENST00000506080 CYP24A1Q07973 514 aa9.7□□□□□ -0.86
PTPN20-216ENST00000506080 STARD3Q14849 445 aa9.7□□□□□ -0.86
PTPN20-216ENST00000506080 SNRNP35Q16560 246 aaKnown RBP9.7□□□□□ -0.86
PTPN20-216ENST00000506080 CCDC65Q8IXS2 484 aa9.7□□□□□ -0.86
PTPN20-216ENST00000506080 ZMIZ2Q8NF64 920 aa9.7□□□□□ -0.86
PTPN20-216ENST00000506080 BAHD1Q8TBE0 780 aaPredicted RBP9.7□□□□□ -0.86
PTPN20-216ENST00000506080 SNX19Q92543 992 aa9.7□□□□□ -0.86
PTPN20-216ENST00000506080 P2RY11Q96G91 374 aa9.7□□□□□ -0.86
PTPN20-216ENST00000506080 SMARCD1Q96GM5 515 aa9.7□□□□□ -0.86
PTPN20-216ENST00000506080 SMOQ99835 787 aa9.7□□□□□ -0.86
PTPN20-216ENST00000506080 KIAA1586Q9HCI6 787 aa9.7□□□□□ -0.86
PTPN20-216ENST00000506080 ITM2CQ9NQX7 267 aa9.7□□□□□ -0.86
PTPN20-216ENST00000506080 TLR8Q9NR97 1041 aaKnown RBP9.7□□□□□ -0.86
PTPN20-216ENST00000506080 KRT82Q9NSB4 513 aa9.7□□□□□ -0.86
PTPN20-216ENST00000506080 IL37Q9NZH6 218 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms