RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 PMF1Q6P1K2 205 aa18.4■□□□□ 0.54
NUP50-208ENST00000430547 DENND1CQ8IV53 801 aa18.4■□□□□ 0.54
NUP50-208ENST00000430547 FMNL3Q8IVF7 1028 aa18.4■□□□□ 0.54
NUP50-208ENST00000430547 SCML4Q8N228 414 aa18.4■□□□□ 0.54
NUP50-208ENST00000430547 KCNV2Q8TDN2 545 aa18.4■□□□□ 0.54
NUP50-208ENST00000430547 SLC35F5Q8WV83 523 aa18.4■□□□□ 0.54
NUP50-208ENST00000430547 EDEM1Q92611 657 aa18.4■□□□□ 0.54
NUP50-208ENST00000430547 TPSD1Q9BZJ3 242 aa18.4■□□□□ 0.54
NUP50-208ENST00000430547 THAP9Q9H5L6 903 aa18.4■□□□□ 0.54
NUP50-208ENST00000430547 PLK2Q9NYY3 685 aa18.4■□□□□ 0.54
NUP50-208ENST00000430547 BCCIPQ9P287 314 aaKnown RBP eCLIP18.4■□□□□ 0.54
NUP50-208ENST00000430547 THADAQ6YHU6 1953 aa18.39■□□□□ 0.53
NUP50-208ENST00000430547 ANTXRLA6NF34 631 aa18.39■□□□□ 0.53
NUP50-208ENST00000430547 PIK3R2O00459 728 aa18.39■□□□□ 0.53
NUP50-208ENST00000430547 CALCAP01258 141 aa18.39■□□□□ 0.53
NUP50-208ENST00000430547 KLKB1P03952 638 aa18.39■□□□□ 0.53
NUP50-208ENST00000430547 GBP1P32455 592 aa18.39■□□□□ 0.53
NUP50-208ENST00000430547 USP8P40818 1118 aa18.39■□□□□ 0.53
NUP50-208ENST00000430547 HARS2P49590 506 aaKnown RBP18.39■□□□□ 0.53
NUP50-208ENST00000430547 ELF2Q15723 593 aa18.39■□□□□ 0.53
NUP50-208ENST00000430547 EXOC3L4Q17RC7 722 aa18.39■□□□□ 0.53
NUP50-208ENST00000430547 DPCR1Q3MIW9 517 aa18.39■□□□□ 0.53
NUP50-208ENST00000430547 USP39Q53GS9 565 aaKnown RBP18.39■□□□□ 0.53
NUP50-208ENST00000430547 EMC10Q5UCC4 262 aa18.39■□□□□ 0.53
NUP50-208ENST00000430547 CLEC17AQ6ZS10 378 aa18.39■□□□□ 0.53
NUP50-208ENST00000430547 BHLHA9Q7RTU4 235 aa18.39■□□□□ 0.53
NUP50-208ENST00000430547 KBTBD6Q86V97 674 aa18.39■□□□□ 0.53
NUP50-208ENST00000430547 IRGQQ8WZA9 623 aa18.39■□□□□ 0.53
NUP50-208ENST00000430547 HSFY1Q96LI6 401 aa18.39■□□□□ 0.53
NUP50-208ENST00000430547 ZSWIM1Q9BR11 485 aa18.39■□□□□ 0.53
NUP50-208ENST00000430547 ZDHHC4Q9NPG8 344 aa18.39■□□□□ 0.53
NUP50-208ENST00000430547 ST7Q9NRC1 585 aa18.39■□□□□ 0.53
NUP50-208ENST00000430547 AGO1Q9UL18 857 aaKnown RBP18.39■□□□□ 0.53
NUP50-208ENST00000430547 CNTN6Q9UQ52 1028 aa18.39■□□□□ 0.53
NUP50-208ENST00000430547 HBS1LQ9Y450 684 aaKnown RBP18.39■□□□□ 0.53
NUP50-208ENST00000430547 SDK1Q7Z5N4 2213 aa18.39■□□□□ 0.53
NUP50-208ENST00000430547 GTPBP10A4D1E9 387 aaKnown RBP18.38■□□□□ 0.53
NUP50-208ENST00000430547 PRR5-ARHGAP8B1AHC4 643 aa18.38■□□□□ 0.53
NUP50-208ENST00000430547 GOLGA6L22H0YM25 854 aa18.38■□□□□ 0.53
NUP50-208ENST00000430547 SGK1O00141 431 aa18.38■□□□□ 0.53
NUP50-208ENST00000430547 TRIM24O15164 1050 aa18.38■□□□□ 0.53
NUP50-208ENST00000430547 THAP12O43422 761 aa18.38■□□□□ 0.53
NUP50-208ENST00000430547 FBXO21O94952 628 aa18.38■□□□□ 0.53
NUP50-208ENST00000430547 LETM1O95202 739 aaPredicted RBP18.38■□□□□ 0.53
NUP50-208ENST00000430547 SLC9A1P19634 815 aa18.38■□□□□ 0.53
NUP50-208ENST00000430547 ERCC5P28715 1186 aaPredicted RBP18.38■□□□□ 0.53
NUP50-208ENST00000430547 ARHGAP8P85298 464 aa18.38■□□□□ 0.53
NUP50-208ENST00000430547 MAN2A1Q16706 1144 aa18.38■□□□□ 0.53
NUP50-208ENST00000430547 ARHGAP44Q17R89 818 aa18.38■□□□□ 0.53
NUP50-208ENST00000430547 SDE2Q6IQ49 451 aa18.38■□□□□ 0.53
NUP50-208ENST00000430547 C11orf74Q86VG3 221 aa18.38■□□□□ 0.53
NUP50-208ENST00000430547 LOXL4Q96JB6 756 aa18.38■□□□□ 0.53
NUP50-208ENST00000430547 MED15Q96RN5 788 aa18.38■□□□□ 0.53
NUP50-208ENST00000430547 SEMA4GQ9NTN9 838 aa18.38■□□□□ 0.53
NUP50-208ENST00000430547 APEX2Q9UBZ4 518 aa18.38■□□□□ 0.53
NUP50-208ENST00000430547 SFMBT1Q9UHJ3 866 aa18.38■□□□□ 0.53
NUP50-208ENST00000430547 PES1O00541 588 aaKnown RBP18.37■□□□□ 0.53
NUP50-208ENST00000430547 ZBTB24O43167 697 aaPredicted RBP18.37■□□□□ 0.53
NUP50-208ENST00000430547 FOXD2O60548 495 aaPredicted RBP18.37■□□□□ 0.53
NUP50-208ENST00000430547 RHOBTB1O94844 696 aa18.37■□□□□ 0.53
NUP50-208ENST00000430547 LTFP02788 710 aa18.37■□□□□ 0.53
NUP50-208ENST00000430547 PRKCSHP14314 528 aaPredicted RBP18.37■□□□□ 0.53
NUP50-208ENST00000430547 SDHBP21912 280 aa18.37■□□□□ 0.53
NUP50-208ENST00000430547 GNA15P30679 374 aa18.37■□□□□ 0.53
NUP50-208ENST00000430547 ACADSBP45954 432 aa18.37■□□□□ 0.53
NUP50-208ENST00000430547 TMEM92Q6UXU6 159 aa18.37■□□□□ 0.53
NUP50-208ENST00000430547 RASSF3Q86WH2 238 aa18.37■□□□□ 0.53
NUP50-208ENST00000430547 IRF2BP1Q8IU81 584 aa18.37■□□□□ 0.53
NUP50-208ENST00000430547 PGBD3Q8N328 593 aa18.37■□□□□ 0.53
NUP50-208ENST00000430547 MDGA1Q8NFP4 955 aa18.37■□□□□ 0.53
NUP50-208ENST00000430547 RMDN1Q96DB5 314 aa18.37■□□□□ 0.53
NUP50-208ENST00000430547 MIS12Q9H081 205 aa18.37■□□□□ 0.53
NUP50-208ENST00000430547 PARD6AQ9NPB6 346 aa18.37■□□□□ 0.53
NUP50-208ENST00000430547 LMBRD1Q9NUN5 540 aa18.37■□□□□ 0.53
NUP50-208ENST00000430547 NUP205Q92621 2012 aa18.37■□□□□ 0.53
NUP50-208ENST00000430547 TCRBV21S2A2A0A5A6 115 aa18.36■□□□□ 0.53
NUP50-208ENST00000430547 SART1O43290 800 aaKnown RBP18.36■□□□□ 0.53
NUP50-208ENST00000430547 EPN2O95208 641 aa18.36■□□□□ 0.53
NUP50-208ENST00000430547 PENKP01210 267 aaPredicted RBP18.36■□□□□ 0.53
NUP50-208ENST00000430547 HOXB2P14652 356 aa18.36■□□□□ 0.53
NUP50-208ENST00000430547 NTSR1P30989 418 aa18.36■□□□□ 0.53
NUP50-208ENST00000430547 PUM1Q14671 1186 aaKnown RBP eCLIP18.36■□□□□ 0.53
NUP50-208ENST00000430547 TRIP4Q15650 581 aaPredicted RBP18.36■□□□□ 0.53
NUP50-208ENST00000430547 CSRP2Q16527 193 aa18.36■□□□□ 0.53
NUP50-208ENST00000430547 MEA1Q16626 185 aa18.36■□□□□ 0.53
NUP50-208ENST00000430547 RSPO4Q2I0M5 234 aaPredicted RBP18.36■□□□□ 0.53
NUP50-208ENST00000430547 HSP90AA4PQ58FG1 418 aa18.36■□□□□ 0.53
NUP50-208ENST00000430547 GJB7Q6PEY0 223 aa18.36■□□□□ 0.53
NUP50-208ENST00000430547 TOGARAM2Q6ZUX3 1019 aa18.36■□□□□ 0.53
NUP50-208ENST00000430547 CHPFQ8IZ52 775 aa18.36■□□□□ 0.53
NUP50-208ENST00000430547 CPXM2Q8N436 756 aa18.36■□□□□ 0.53
NUP50-208ENST00000430547 DDI1Q8WTU0 396 aa18.36■□□□□ 0.53
NUP50-208ENST00000430547 HMGB4Q8WW32 186 aa18.36■□□□□ 0.53
NUP50-208ENST00000430547 FAM149B1Q96BN6 582 aa18.36■□□□□ 0.53
NUP50-208ENST00000430547 ZC3H10Q96K80 434 aaKnown RBP18.36■□□□□ 0.53
NUP50-208ENST00000430547 SPACA7Q96KW9 195 aa18.36■□□□□ 0.53
NUP50-208ENST00000430547 CEP250Q9BV73 2442 aa18.36■□□□□ 0.53
NUP50-208ENST00000430547 ARRDC1-AS1Q9H2J1 176 aa18.36■□□□□ 0.53
NUP50-208ENST00000430547 CDV3Q9UKY7 258 aaKnown RBP18.36■□□□□ 0.53
NUP50-208ENST00000430547 STARD13Q9Y3M8 1113 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms