RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 PPP3CCP48454 512 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 HADHQ16836 314 aaKnown RBP11.41□□□□□ -0.58
BRCC3-204ENST00000369462 SMTNL2Q2TAL5 461 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 ATP13A4Q4VNC1 1196 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 KCNT1Q5JUK3 1230 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 HECTD3Q5T447 861 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 ZFYVE27Q5T4F4 411 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 RHOT1Q8IXI2 618 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 ALG3Q92685 438 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 ZNF707Q96C28 371 aaPredicted RBP11.41□□□□□ -0.58
BRCC3-204ENST00000369462 NACA2Q9H009 215 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 ATXN3LQ9H3M9 355 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 SMOC2Q9H3U7 446 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 PIDD1Q9HB75 910 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 MTCH2Q9Y6C9 303 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 C2orf78A6NCI8 922 aa11.4□□□□□ -0.58
BRCC3-204ENST00000369462 KCNK3O14649 394 aa11.4□□□□□ -0.58
BRCC3-204ENST00000369462 ENDOD1O94919 500 aa11.4□□□□□ -0.58
BRCC3-204ENST00000369462 F9P00740 461 aa11.4□□□□□ -0.58
BRCC3-204ENST00000369462 RHOP08100 348 aa11.4□□□□□ -0.58
BRCC3-204ENST00000369462 CTNNA1P35221 906 aaKnown RBP11.4□□□□□ -0.58
BRCC3-204ENST00000369462 NTHL1P78549 312 aa11.4□□□□□ -0.58
BRCC3-204ENST00000369462 SLC25A11Q02978 314 aaKnown RBP11.4□□□□□ -0.58
BRCC3-204ENST00000369462 TXNDC8Q6A555 127 aa11.4□□□□□ -0.58
BRCC3-204ENST00000369462 BNIPLQ7Z465 357 aa11.4□□□□□ -0.58
BRCC3-204ENST00000369462 GRASPQ7Z6J2 395 aaPredicted RBP11.4□□□□□ -0.58
BRCC3-204ENST00000369462 UBL4BQ8N7F7 174 aa11.4□□□□□ -0.58
BRCC3-204ENST00000369462 EFHBQ8N7U6 833 aa11.4□□□□□ -0.58
BRCC3-204ENST00000369462 SMG7Q92540 1137 aaKnown RBP11.4□□□□□ -0.58
BRCC3-204ENST00000369462 ACSF2Q96CM8 615 aaPredicted RBP11.4□□□□□ -0.58
BRCC3-204ENST00000369462 PGAP3Q96FM1 320 aaPredicted RBP11.4□□□□□ -0.58
BRCC3-204ENST00000369462 PEBP4Q96S96 227 aa11.4□□□□□ -0.58
BRCC3-204ENST00000369462 NCAPGQ9BPX3 1015 aa11.4□□□□□ -0.58
BRCC3-204ENST00000369462 APOL5Q9BWW9 433 aa11.4□□□□□ -0.58
BRCC3-204ENST00000369462 TRPC7Q9HCX4 862 aa11.4□□□□□ -0.58
BRCC3-204ENST00000369462 RRAGDQ9NQL2 400 aaPredicted RBP11.4□□□□□ -0.58
BRCC3-204ENST00000369462 OLA1Q9NTK5 396 aaKnown RBP11.4□□□□□ -0.58
BRCC3-204ENST00000369462 MARCH2Q9P0N8 246 aa11.4□□□□□ -0.58
BRCC3-204ENST00000369462 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.4□□□□□ -0.58
BRCC3-204ENST00000369462 PCDHA3Q9Y5H8 950 aa11.4□□□□□ -0.58
BRCC3-204ENST00000369462 PRUNE2Q8WUY3 3088 aa11.4□□□□□ -0.58
BRCC3-204ENST00000369462 SPTBN5Q9NRC6 3674 aaKnown RBP11.4□□□□□ -0.59
BRCC3-204ENST00000369462 DDX3YO15523 660 aaKnown RBP11.4□□□□□ -0.59
BRCC3-204ENST00000369462 SRGAP2O75044 1071 aa11.4□□□□□ -0.59
BRCC3-204ENST00000369462 GBP1P32455 592 aa11.4□□□□□ -0.59
BRCC3-204ENST00000369462 ATP5C1P36542 298 aaKnown RBP11.4□□□□□ -0.59
BRCC3-204ENST00000369462 CCR2P41597 374 aa11.4□□□□□ -0.59
BRCC3-204ENST00000369462 PEX5P50542 639 aa11.4□□□□□ -0.59
BRCC3-204ENST00000369462 CYP4F8P98187 520 aa11.4□□□□□ -0.59
BRCC3-204ENST00000369462 PAPD7Q5XG87 772 aaKnown RBP11.4□□□□□ -0.59
BRCC3-204ENST00000369462 MSANTD2Q6P1R3 559 aa11.4□□□□□ -0.59
BRCC3-204ENST00000369462 PDZD4Q76G19 769 aaPredicted RBP11.4□□□□□ -0.59
BRCC3-204ENST00000369462 SND1Q7KZF4 910 aaKnown RBP eCLIP11.4□□□□□ -0.59
BRCC3-204ENST00000369462 MRPS31Q92665 395 aaKnown RBP11.4□□□□□ -0.59
BRCC3-204ENST00000369462 RNF34Q969K3 372 aa11.4□□□□□ -0.59
BRCC3-204ENST00000369462 SFXN1Q9H9B4 322 aa11.4□□□□□ -0.59
BRCC3-204ENST00000369462 WDR6Q9NNW5 1121 aaKnown RBP11.4□□□□□ -0.59
BRCC3-204ENST00000369462 KLHL11Q9NVR0 708 aa11.4□□□□□ -0.59
BRCC3-204ENST00000369462 SNX12Q9UMY4 172 aa11.4□□□□□ -0.59
BRCC3-204ENST00000369462 NRG2O14511 850 aaPredicted RBP11.39□□□□□ -0.59
BRCC3-204ENST00000369462 IRAK2O43187 625 aa11.39□□□□□ -0.59
BRCC3-204ENST00000369462 COCHO43405 550 aa11.39□□□□□ -0.59
BRCC3-204ENST00000369462 PSTPIP1O43586 416 aa11.39□□□□□ -0.59
BRCC3-204ENST00000369462 URI1O94763 535 aaPredicted RBP11.39□□□□□ -0.59
BRCC3-204ENST00000369462 IGLV3-25P01717 112 aa11.39□□□□□ -0.59
BRCC3-204ENST00000369462 CDC25CP30307 473 aa11.39□□□□□ -0.59
BRCC3-204ENST00000369462 LRRC38Q5VT99 294 aa11.39□□□□□ -0.59
BRCC3-204ENST00000369462 EP400NLQ6ZTU2 488 aa11.39□□□□□ -0.59
BRCC3-204ENST00000369462 TADA2BQ86TJ2 420 aa11.39□□□□□ -0.59
BRCC3-204ENST00000369462 CCDC185Q8N715 623 aa11.39□□□□□ -0.59
BRCC3-204ENST00000369462 TCEAL4Q96EI5 215 aa11.39□□□□□ -0.59
BRCC3-204ENST00000369462 SERPINB11Q96P15 392 aa11.39□□□□□ -0.59
BRCC3-204ENST00000369462 GCNAQ96QF7 691 aa11.39□□□□□ -0.59
BRCC3-204ENST00000369462 CYP2S1Q96SQ9 504 aa11.39□□□□□ -0.59
BRCC3-204ENST00000369462 CDK5RAP1Q96SZ6 601 aaKnown RBP11.39□□□□□ -0.59
BRCC3-204ENST00000369462 RNF38Q9H0F5 515 aa11.39□□□□□ -0.59
BRCC3-204ENST00000369462 WDCPQ9H6R7 721 aa11.39□□□□□ -0.59
BRCC3-204ENST00000369462 DZANK1Q9NVP4 752 aa11.39□□□□□ -0.59
BRCC3-204ENST00000369462 RASAL2Q9UJF2 1139 aa11.39□□□□□ -0.59
BRCC3-204ENST00000369462 SAR1BQ9Y6B6 198 aa11.39□□□□□ -0.59
BRCC3-204ENST00000369462 BRWD1Q9NSI6 2320 aa11.39□□□□□ -0.59
BRCC3-204ENST00000369462 OAS1P00973 400 aaKnown RBP11.39□□□□□ -0.59
BRCC3-204ENST00000369462 KRT7P08729 469 aa11.39□□□□□ -0.59
BRCC3-204ENST00000369462 RARAP10276 462 aa11.39□□□□□ -0.59
BRCC3-204ENST00000369462 CTNNA2P26232 953 aa11.39□□□□□ -0.59
BRCC3-204ENST00000369462 EPHA5P54756 1037 aa11.39□□□□□ -0.59
BRCC3-204ENST00000369462 RWDD2BP57060 319 aa11.39□□□□□ -0.59
BRCC3-204ENST00000369462 ZC3H12AQ5D1E8 599 aaKnown RBP11.39□□□□□ -0.59
BRCC3-204ENST00000369462 RARS2Q5T160 578 aaKnown RBP11.39□□□□□ -0.59
BRCC3-204ENST00000369462 CYP4V2Q6ZWL3 525 aaPredicted RBP11.39□□□□□ -0.59
BRCC3-204ENST00000369462 POLNQ7Z5Q5 900 aa11.39□□□□□ -0.59
BRCC3-204ENST00000369462 MICALL1Q8N3F8 863 aa11.39□□□□□ -0.59
BRCC3-204ENST00000369462 ZNF276Q8N554 614 aa11.39□□□□□ -0.59
BRCC3-204ENST00000369462 MAB21L3Q8N8X9 362 aa11.39□□□□□ -0.59
BRCC3-204ENST00000369462 UBE2Q2Q8WVN8 375 aa11.39□□□□□ -0.59
BRCC3-204ENST00000369462 HSPH1Q92598 858 aa11.39□□□□□ -0.59
BRCC3-204ENST00000369462 SLC22A12Q96S37 553 aa11.39□□□□□ -0.59
BRCC3-204ENST00000369462 OSBPL9Q96SU4 736 aa11.39□□□□□ -0.59
BRCC3-204ENST00000369462 TMPRSS4Q9NRS4 437 aa11.39□□□□□ -0.59
BRCC3-204ENST00000369462 DNMT3LQ9UJW3 386 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms