RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 TPM2P07951 284 aa28.87■■■□□ 2.21
ATPAF1-201ENST00000329231 TRIP4Q15650 581 aaPredicted RBP28.87■■■□□ 2.21
ATPAF1-201ENST00000329231 HSF5Q4G112 596 aaPredicted RBP28.87■■■□□ 2.21
ATPAF1-201ENST00000329231 CDKAL1Q5VV42 579 aa28.87■■■□□ 2.21
ATPAF1-201ENST00000329231 GRAMD4Q6IC98 578 aa28.87■■■□□ 2.21
ATPAF1-201ENST00000329231 DENND1CQ8IV53 801 aa28.87■■■□□ 2.21
ATPAF1-201ENST00000329231 CLEC4CQ8WTT0 213 aa28.87■■■□□ 2.21
ATPAF1-201ENST00000329231 RUBCNQ92622 972 aa28.87■■■□□ 2.21
ATPAF1-201ENST00000329231 DNAJC17Q9NVM6 304 aaKnown RBP28.87■■■□□ 2.21
ATPAF1-201ENST00000329231 TAB2Q9NYJ8 693 aa28.87■■■□□ 2.21
ATPAF1-201ENST00000329231 SFMBT1Q9UHJ3 866 aa28.87■■■□□ 2.21
ATPAF1-201ENST00000329231 AGO1Q9UL18 857 aaKnown RBP28.87■■■□□ 2.21
ATPAF1-201ENST00000329231 PTPRZ1P23471 2315 aaPredicted RBP28.86■■■□□ 2.21
ATPAF1-201ENST00000329231 HARS2P49590 506 aaKnown RBP28.86■■■□□ 2.21
ATPAF1-201ENST00000329231 KCNMA1Q12791 1236 aa28.86■■■□□ 2.21
ATPAF1-201ENST00000329231 MSANTD2Q6P1R3 559 aa28.86■■■□□ 2.21
ATPAF1-201ENST00000329231 C11orf57Q6ZUT1 292 aaPredicted RBP28.86■■■□□ 2.21
ATPAF1-201ENST00000329231 SFTPA1Q8IWL2 248 aa28.86■■■□□ 2.21
ATPAF1-201ENST00000329231 SCUBE3Q8IX30 993 aa28.86■■■□□ 2.21
ATPAF1-201ENST00000329231 HHIPQ96QV1 700 aa28.86■■■□□ 2.21
ATPAF1-201ENST00000329231 HINFPQ9BQA5 517 aa28.86■■■□□ 2.21
ATPAF1-201ENST00000329231 SLC4A5Q9BY07 1137 aa28.86■■■□□ 2.21
ATPAF1-201ENST00000329231 POLR3BQ9NW08 1133 aaPredicted RBP28.86■■■□□ 2.21
ATPAF1-201ENST00000329231 TMEM63CQ9P1W3 806 aa28.86■■■□□ 2.21
ATPAF1-201ENST00000329231 AJAP1Q9UKB5 411 aaPredicted RBP28.86■■■□□ 2.21
ATPAF1-201ENST00000329231 RAB23Q9ULC3 237 aa28.86■■■□□ 2.21
ATPAF1-201ENST00000329231 FOXN3O00409 490 aaPredicted RBP28.85■■■□□ 2.21
ATPAF1-201ENST00000329231 HOXC13P31276 330 aa28.85■■■□□ 2.21
ATPAF1-201ENST00000329231 KLHDC7AQ5VTJ3 777 aa28.85■■■□□ 2.21
ATPAF1-201ENST00000329231 DPY19L2P1Q6NXN4 242 aa28.85■■■□□ 2.21
ATPAF1-201ENST00000329231 TERB1Q8NA31 727 aa28.85■■■□□ 2.21
ATPAF1-201ENST00000329231 FANCLQ9NW38 375 aa28.85■■■□□ 2.21
ATPAF1-201ENST00000329231 MMP17Q9ULZ9 603 aa28.85■■■□□ 2.21
ATPAF1-201ENST00000329231 FAM186AA6NE01 2351 aa28.85■■■□□ 2.21
ATPAF1-201ENST00000329231 DMDP11532 3685 aa28.85■■■□□ 2.21
ATPAF1-201ENST00000329231 HRO43593 1189 aa28.84■■■□□ 2.21
ATPAF1-201ENST00000329231 APBB3O95704 486 aa28.84■■■□□ 2.21
ATPAF1-201ENST00000329231 PTMSP20962 102 aa28.84■■■□□ 2.21
ATPAF1-201ENST00000329231 TIE1P35590 1138 aa28.84■■■□□ 2.21
ATPAF1-201ENST00000329231 PXNP49023 591 aaPredicted RBP28.84■■■□□ 2.21
ATPAF1-201ENST00000329231 BPIFB4P59827 614 aa28.84■■■□□ 2.21
ATPAF1-201ENST00000329231 SIM2Q14190 667 aaPredicted RBP28.84■■■□□ 2.21
ATPAF1-201ENST00000329231 TMEM110Q86TL2 294 aa28.84■■■□□ 2.21
ATPAF1-201ENST00000329231 CPXM2Q8N436 756 aa28.84■■■□□ 2.21
ATPAF1-201ENST00000329231 CCDC33Q8N5R6 958 aa28.84■■■□□ 2.21
ATPAF1-201ENST00000329231 KCNV2Q8TDN2 545 aa28.84■■■□□ 2.21
ATPAF1-201ENST00000329231 BHMTQ93088 406 aa28.84■■■□□ 2.21
ATPAF1-201ENST00000329231 TRIM62Q9BVG3 475 aa28.84■■■□□ 2.21
ATPAF1-201ENST00000329231 PCDHGC3Q9UN70 934 aa28.84■■■□□ 2.21
ATPAF1-201ENST00000329231 CYBBP04839 570 aa28.83■■■□□ 2.21
ATPAF1-201ENST00000329231 KIR2DL1P43626 348 aaPredicted RBP28.83■■■□□ 2.21
ATPAF1-201ENST00000329231 MYL5Q02045 173 aa28.83■■■□□ 2.21
ATPAF1-201ENST00000329231 RAPGEF1Q13905 1077 aa28.83■■■□□ 2.21
ATPAF1-201ENST00000329231 KRT31Q15323 416 aa28.83■■■□□ 2.21
ATPAF1-201ENST00000329231 C10orf76Q5T2E6 689 aa28.83■■■□□ 2.21
ATPAF1-201ENST00000329231 PRR23BQ6ZRT6 265 aa28.83■■■□□ 2.21
ATPAF1-201ENST00000329231 FAM71AQ8IYT1 594 aa28.83■■■□□ 2.21
ATPAF1-201ENST00000329231 ALLCQ8N6M5 410 aa28.83■■■□□ 2.21
ATPAF1-201ENST00000329231 ANKRD20A12PQ8NF67 263 aa28.83■■■□□ 2.21
ATPAF1-201ENST00000329231 FAM149B1Q96BN6 582 aa28.83■■■□□ 2.21
ATPAF1-201ENST00000329231 LSM14BQ9BX40 385 aaKnown RBP28.83■■■□□ 2.21
ATPAF1-201ENST00000329231 VPS16Q9H269 839 aa28.83■■■□□ 2.21
ATPAF1-201ENST00000329231 PLK2Q9NYY3 685 aa28.83■■■□□ 2.21
ATPAF1-201ENST00000329231 NCDNQ9UBB6 729 aa28.83■■■□□ 2.21
ATPAF1-201ENST00000329231 CYTH4Q9UIA0 394 aa28.83■■■□□ 2.21
ATPAF1-201ENST00000329231 ANTXRLA6NF34 631 aa28.82■■■□□ 2.2
ATPAF1-201ENST00000329231 E5RJQ4 531 aa28.82■■■□□ 2.2
ATPAF1-201ENST00000329231 MSI1O43347 362 aaKnown RBP28.82■■■□□ 2.2
ATPAF1-201ENST00000329231 KLF8O95600 359 aaPredicted RBP28.82■■■□□ 2.2
ATPAF1-201ENST00000329231 PENKP01210 267 aaPredicted RBP28.82■■■□□ 2.2
ATPAF1-201ENST00000329231 NCAM1P13591 858 aa28.82■■■□□ 2.2
ATPAF1-201ENST00000329231 CLCN1P35523 988 aa28.82■■■□□ 2.2
ATPAF1-201ENST00000329231 KRT9P35527 623 aa28.82■■■□□ 2.2
ATPAF1-201ENST00000329231 DGKGP49619 791 aa28.82■■■□□ 2.2
ATPAF1-201ENST00000329231 PDCLQ13371 301 aa28.82■■■□□ 2.2
ATPAF1-201ENST00000329231 DRAP1Q14919 205 aaPredicted RBP28.82■■■□□ 2.2
ATPAF1-201ENST00000329231 EMC10Q5UCC4 262 aa28.82■■■□□ 2.2
ATPAF1-201ENST00000329231 CAVIN1Q6NZI2 390 aaKnown RBP28.82■■■□□ 2.2
ATPAF1-201ENST00000329231 IL17RCQ8NAC3 791 aa28.82■■■□□ 2.2
ATPAF1-201ENST00000329231 TSTD1Q8NFU3 115 aa28.82■■■□□ 2.2
ATPAF1-201ENST00000329231 LHX5Q9H2C1 402 aa28.82■■■□□ 2.2
ATPAF1-201ENST00000329231 EBF1Q9UH73 591 aa28.82■■■□□ 2.2
ATPAF1-201ENST00000329231 FHOD1Q9Y613 1164 aa28.82■■■□□ 2.2
ATPAF1-201ENST00000329231 KIAA1549LQ6ZVL6 1849 aa28.81■■■□□ 2.2
ATPAF1-201ENST00000329231 TRIM24O15164 1050 aa28.81■■■□□ 2.2
ATPAF1-201ENST00000329231 AXIN1O15169 862 aa28.81■■■□□ 2.2
ATPAF1-201ENST00000329231 LATS1O95835 1130 aa28.81■■■□□ 2.2
ATPAF1-201ENST00000329231 CHRM1P11229 460 aaPredicted RBP28.81■■■□□ 2.2
ATPAF1-201ENST00000329231 UCHL3P15374 230 aa28.81■■■□□ 2.2
ATPAF1-201ENST00000329231 SRSF5Q13243 272 aaKnown RBP28.81■■■□□ 2.2
ATPAF1-201ENST00000329231 CRY1Q16526 586 aa28.81■■■□□ 2.2
ATPAF1-201ENST00000329231 EOGTQ5NDL2 527 aa28.81■■■□□ 2.2
ATPAF1-201ENST00000329231 FKBP15Q5T1M5 1219 aa28.81■■■□□ 2.2
ATPAF1-201ENST00000329231 FYB2Q5VWT5 728 aa28.81■■■□□ 2.2
ATPAF1-201ENST00000329231 CEP68Q76N32 757 aa28.81■■■□□ 2.2
ATPAF1-201ENST00000329231 BEND5Q7L4P6 421 aa28.81■■■□□ 2.2
ATPAF1-201ENST00000329231 TRMT11Q7Z4G4 463 aaKnown RBP28.81■■■□□ 2.2
ATPAF1-201ENST00000329231 SLC47A2Q86VL8 602 aa28.81■■■□□ 2.2
ATPAF1-201ENST00000329231 FAM217AQ8IXS0 508 aa28.81■■■□□ 2.2
ATPAF1-201ENST00000329231 TXNDC5Q8NBS9 432 aaKnown RBP28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms