RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 NFKB2Q00653 900 aa11.68□□□□□ -0.54
PTP4A1-207ENST00000639568 E2F1Q01094 437 aa11.68□□□□□ -0.54
PTP4A1-207ENST00000639568 INSM1Q01101 510 aaPredicted RBP11.68□□□□□ -0.54
PTP4A1-207ENST00000639568 ZNF174Q15697 407 aa11.68□□□□□ -0.54
PTP4A1-207ENST00000639568 SGO2Q562F6 1265 aa11.68□□□□□ -0.54
PTP4A1-207ENST00000639568 HECTD3Q5T447 861 aa11.68□□□□□ -0.54
PTP4A1-207ENST00000639568 FAM171BQ6P995 826 aa11.68□□□□□ -0.54
PTP4A1-207ENST00000639568 XKR5Q6UX68 686 aa11.68□□□□□ -0.54
PTP4A1-207ENST00000639568 PDZD8Q8NEN9 1154 aa11.68□□□□□ -0.54
PTP4A1-207ENST00000639568 SAP25Q8TEE9 199 aa11.68□□□□□ -0.54
PTP4A1-207ENST00000639568 UCMAQ8WVF2 138 aa11.68□□□□□ -0.54
PTP4A1-207ENST00000639568 RFFLQ8WZ73 363 aa11.68□□□□□ -0.54
PTP4A1-207ENST00000639568 MYLPFQ96A32 169 aa11.68□□□□□ -0.54
PTP4A1-207ENST00000639568 CCDC97Q96F63 343 aaPredicted RBP11.68□□□□□ -0.54
PTP4A1-207ENST00000639568 MMS19Q96T76 1030 aa11.68□□□□□ -0.54
PTP4A1-207ENST00000639568 DUSP9Q99956 384 aaKnown RBP11.68□□□□□ -0.54
PTP4A1-207ENST00000639568 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.68□□□□□ -0.54
PTP4A1-207ENST00000639568 RAB34Q9BZG1 259 aa11.68□□□□□ -0.54
PTP4A1-207ENST00000639568 TRIM9Q9C026 710 aa11.68□□□□□ -0.54
PTP4A1-207ENST00000639568 AGAP1Q9UPQ3 857 aa11.68□□□□□ -0.54
PTP4A1-207ENST00000639568 SNX9Q9Y5X1 595 aa11.68□□□□□ -0.54
PTP4A1-207ENST00000639568 PTPRJQ12913 1337 aa11.67□□□□□ -0.54
PTP4A1-207ENST00000639568 F8VP50 259 aa11.67□□□□□ -0.54
PTP4A1-207ENST00000639568 VILLO15195 856 aa11.67□□□□□ -0.54
PTP4A1-207ENST00000639568 TRAK2O60296 914 aa11.67□□□□□ -0.54
PTP4A1-207ENST00000639568 ATP2C2O75185 946 aa11.67□□□□□ -0.54
PTP4A1-207ENST00000639568 SEMA4FO95754 770 aa11.67□□□□□ -0.54
PTP4A1-207ENST00000639568 CR2P20023 1033 aa11.67□□□□□ -0.54
PTP4A1-207ENST00000639568 SCP2P22307 547 aa11.67□□□□□ -0.54
PTP4A1-207ENST00000639568 POLR2BP30876 1174 aaKnown RBP11.67□□□□□ -0.54
PTP4A1-207ENST00000639568 ACSL1P33121 698 aa11.67□□□□□ -0.54
PTP4A1-207ENST00000639568 FXR2P51116 673 aaKnown RBP eCLIP11.67□□□□□ -0.54
PTP4A1-207ENST00000639568 FOSBP53539 338 aa11.67□□□□□ -0.54
PTP4A1-207ENST00000639568 PSMC1P62191 440 aaKnown RBP11.67□□□□□ -0.54
PTP4A1-207ENST00000639568 RACK1P63244 317 aaKnown RBP11.67□□□□□ -0.54
PTP4A1-207ENST00000639568 KRT79Q5XKE5 535 aa11.67□□□□□ -0.54
PTP4A1-207ENST00000639568 ADALQ6DHV7 355 aa11.67□□□□□ -0.54
PTP4A1-207ENST00000639568 EXD3Q8N9H8 876 aa11.67□□□□□ -0.54
PTP4A1-207ENST00000639568 BHMTQ93088 406 aa11.67□□□□□ -0.54
PTP4A1-207ENST00000639568 SYT15Q9BQS2 421 aa11.67□□□□□ -0.54
PTP4A1-207ENST00000639568 BTBD1Q9H0C5 482 aa11.67□□□□□ -0.54
PTP4A1-207ENST00000639568 ZSWIM6Q9HCJ5 1215 aa11.67□□□□□ -0.54
PTP4A1-207ENST00000639568 SRPK3Q9UPE1 567 aa11.67□□□□□ -0.54
PTP4A1-207ENST00000639568 R3HCC1Q9Y3T6 440 aaKnown RBP11.67□□□□□ -0.54
PTP4A1-207ENST00000639568 PCDHB1Q9Y5F3 818 aa11.67□□□□□ -0.54
PTP4A1-207ENST00000639568 OBSL1O75147 1896 aa11.67□□□□□ -0.54
PTP4A1-207ENST00000639568 DOPEY2Q9Y3R5 2298 aa11.67□□□□□ -0.54
PTP4A1-207ENST00000639568 CABIN1Q9Y6J0 2220 aa11.67□□□□□ -0.54
PTP4A1-207ENST00000639568 CREBBPQ92793 2442 aa11.66□□□□□ -0.54
PTP4A1-207ENST00000639568 RELNP78509 3460 aa11.66□□□□□ -0.54
PTP4A1-207ENST00000639568 HCRTO43612 131 aa11.66□□□□□ -0.54
PTP4A1-207ENST00000639568 USP12O75317 370 aa11.66□□□□□ -0.54
PTP4A1-207ENST00000639568 DXOO77932 396 aaKnown RBP11.66□□□□□ -0.54
PTP4A1-207ENST00000639568 PIGRP01833 764 aa11.66□□□□□ -0.54
PTP4A1-207ENST00000639568 ITGB3P05106 788 aa11.66□□□□□ -0.54
PTP4A1-207ENST00000639568 EPHX1P07099 455 aa11.66□□□□□ -0.54
PTP4A1-207ENST00000639568 SFTPCP11686 197 aa11.66□□□□□ -0.54
PTP4A1-207ENST00000639568 YWHAQP27348 245 aa11.66□□□□□ -0.54
PTP4A1-207ENST00000639568 CCR10P46092 362 aa11.66□□□□□ -0.54
PTP4A1-207ENST00000639568 LSSP48449 732 aa11.66□□□□□ -0.54
PTP4A1-207ENST00000639568 NCKAP1LP55160 1127 aa11.66□□□□□ -0.54
PTP4A1-207ENST00000639568 TFAMQ00059 246 aaKnown RBP11.66□□□□□ -0.54
PTP4A1-207ENST00000639568 ARID5AQ03989 594 aa11.66□□□□□ -0.54
PTP4A1-207ENST00000639568 GRIN1Q05586 938 aa11.66□□□□□ -0.54
PTP4A1-207ENST00000639568 ORC2Q13416 577 aaPredicted RBP11.66□□□□□ -0.54
PTP4A1-207ENST00000639568 BMP2KLQ5H9B9 411 aa11.66□□□□□ -0.54
PTP4A1-207ENST00000639568 HS2ST1Q7LGA3 356 aa11.66□□□□□ -0.54
PTP4A1-207ENST00000639568 OSTM1Q86WC4 334 aa11.66□□□□□ -0.54
PTP4A1-207ENST00000639568 NT5DC4Q86YG4 428 aa11.66□□□□□ -0.54
PTP4A1-207ENST00000639568 TOP6BLQ8N6T0 577 aa11.66□□□□□ -0.54
PTP4A1-207ENST00000639568 FBXO32Q969P5 355 aa11.66□□□□□ -0.54
PTP4A1-207ENST00000639568 VCPIP1Q96JH7 1222 aa11.66□□□□□ -0.54
PTP4A1-207ENST00000639568 C8orf48Q96LL4 319 aa11.66□□□□□ -0.54
PTP4A1-207ENST00000639568 LHX5Q9H2C1 402 aa11.66□□□□□ -0.54
PTP4A1-207ENST00000639568 POLR1BQ9H9Y6 1135 aa11.66□□□□□ -0.54
PTP4A1-207ENST00000639568 GDF3Q9NR23 364 aa11.66□□□□□ -0.54
PTP4A1-207ENST00000639568 STARD5Q9NSY2 213 aa11.66□□□□□ -0.54
PTP4A1-207ENST00000639568 WDR70Q9NW82 654 aa11.66□□□□□ -0.54
PTP4A1-207ENST00000639568 THAP10Q9P2Z0 257 aaPredicted RBP11.66□□□□□ -0.54
PTP4A1-207ENST00000639568 CDH9Q9ULB4 789 aa11.66□□□□□ -0.54
PTP4A1-207ENST00000639568 KNL1Q8NG31 2342 aa11.66□□□□□ -0.54
PTP4A1-207ENST00000639568 ABCA12Q86UK0 2595 aa11.65□□□□□ -0.54
PTP4A1-207ENST00000639568 GABRDO14764 452 aa11.65□□□□□ -0.54
PTP4A1-207ENST00000639568 TSPAN3O60637 253 aa11.65□□□□□ -0.54
PTP4A1-207ENST00000639568 CDC45O75419 566 aa11.65□□□□□ -0.54
PTP4A1-207ENST00000639568 IL18RAPO95256 599 aa11.65□□□□□ -0.54
PTP4A1-207ENST00000639568 KRT19P08727 400 aa11.65□□□□□ -0.54
PTP4A1-207ENST00000639568 CISD3P0C7P0 127 aa11.65□□□□□ -0.54
PTP4A1-207ENST00000639568 PLCG1P19174 1290 aa11.65□□□□□ -0.54
PTP4A1-207ENST00000639568 RBMS1P29558 406 aaKnown RBP11.65□□□□□ -0.54
PTP4A1-207ENST00000639568 COPAP53621 1224 aa11.65□□□□□ -0.54
PTP4A1-207ENST00000639568 INHBCP55103 352 aa11.65□□□□□ -0.54
PTP4A1-207ENST00000639568 TLE1Q04724 770 aa11.65□□□□□ -0.54
PTP4A1-207ENST00000639568 GOLGA8FQ08AF8 430 aa11.65□□□□□ -0.54
PTP4A1-207ENST00000639568 GOLGA8DPQ0D2H9 430 aa11.65□□□□□ -0.54
PTP4A1-207ENST00000639568 ZRSR1Q15695 479 aaKnown RBP11.65□□□□□ -0.54
PTP4A1-207ENST00000639568 SLFN12LQ6IEE8 588 aa11.65□□□□□ -0.54
PTP4A1-207ENST00000639568 HTR3DQ70Z44 454 aa11.65□□□□□ -0.54
PTP4A1-207ENST00000639568 CCDC83Q8IWF9 413 aa11.65□□□□□ -0.54
PTP4A1-207ENST00000639568 CSGALNACT2Q8N6G5 542 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms