RNA–Protein interactions for RNA: ENST00000586339.1

HDAC5-203, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-203ENST00000586339 CNTNAP3Q9BZ76 1288 aa14.81□□□□□ -0.04
HDAC5-203ENST00000586339 GTPBP4Q9BZE4 634 aaKnown RBP14.81□□□□□ -0.04
HDAC5-203ENST00000586339 SMOC1Q9H4F8 434 aa14.81□□□□□ -0.04
HDAC5-203ENST00000586339 MMRN2Q9H8L6 949 aa14.81□□□□□ -0.04
HDAC5-203ENST00000586339 CLIC5Q9NZA1 410 aa14.81□□□□□ -0.04
HDAC5-203ENST00000586339 BCCIPQ9P287 314 aaKnown RBP eCLIP14.81□□□□□ -0.04
HDAC5-203ENST00000586339 USP3Q9Y6I4 520 aa14.81□□□□□ -0.04
HDAC5-203ENST00000586339 CKAP5Q14008 2032 aa14.81□□□□□ -0.04
HDAC5-203ENST00000586339 A0A1W2PQH9 124 aa14.8□□□□□ -0.04
HDAC5-203ENST00000586339 TCRBV21S2A2A0A5A6 115 aa14.8□□□□□ -0.04
HDAC5-203ENST00000586339 LNP1A1A4G5 178 aa14.8□□□□□ -0.04
HDAC5-203ENST00000586339 NEDD8-MDP1E9PL57 170 aa14.8□□□□□ -0.04
HDAC5-203ENST00000586339 SLC16A3O15427 465 aaKnown RBP14.8□□□□□ -0.04
HDAC5-203ENST00000586339 RALAP11233 206 aa14.8□□□□□ -0.04
HDAC5-203ENST00000586339 TYRP14679 529 aa14.8□□□□□ -0.04
HDAC5-203ENST00000586339 NTSR1P30989 418 aa14.8□□□□□ -0.04
HDAC5-203ENST00000586339 PPP1R26Q5T8A7 1209 aaPredicted RBP14.8□□□□□ -0.04
HDAC5-203ENST00000586339 EMC10Q5UCC4 262 aa14.8□□□□□ -0.04
HDAC5-203ENST00000586339 ARHGAP17Q68EM7 881 aa14.8□□□□□ -0.04
HDAC5-203ENST00000586339 Q6ZNB5 142 aa14.8□□□□□ -0.04
HDAC5-203ENST00000586339 LPCAT2Q7L5N7 544 aa14.8□□□□□ -0.04
HDAC5-203ENST00000586339 TTC30AQ86WT1 665 aa14.8□□□□□ -0.04
HDAC5-203ENST00000586339 HMGB4Q8WW32 186 aa14.8□□□□□ -0.04
HDAC5-203ENST00000586339 GSDMAQ96QA5 445 aa14.8□□□□□ -0.04
HDAC5-203ENST00000586339 UBXN6Q9BZV1 441 aa14.8□□□□□ -0.04
HDAC5-203ENST00000586339 NMUR1Q9HB89 426 aa14.8□□□□□ -0.04
HDAC5-203ENST00000586339 CISHQ9NSE2 258 aa14.8□□□□□ -0.04
HDAC5-203ENST00000586339 DNAJC17Q9NVM6 304 aaKnown RBP14.8□□□□□ -0.04
HDAC5-203ENST00000586339 RAB20Q9NX57 234 aa14.8□□□□□ -0.04
HDAC5-203ENST00000586339 EVLQ9UI08 416 aaPredicted RBP14.8□□□□□ -0.04
HDAC5-203ENST00000586339 NAGPAQ9UK23 515 aa14.8□□□□□ -0.04
HDAC5-203ENST00000586339 INVSQ9Y283 1065 aa14.8□□□□□ -0.04
HDAC5-203ENST00000586339 ZNF510Q9Y2H8 683 aa14.8□□□□□ -0.04
HDAC5-203ENST00000586339 KHNYNO15037 678 aaKnown RBP14.79□□□□□ -0.04
HDAC5-203ENST00000586339 HOXB2P14652 356 aa14.79□□□□□ -0.04
HDAC5-203ENST00000586339 HOXD12P35452 270 aa14.79□□□□□ -0.04
HDAC5-203ENST00000586339 DHPSP49366 369 aaPredicted RBP14.79□□□□□ -0.04
HDAC5-203ENST00000586339 SLC8A3P57103 927 aa14.79□□□□□ -0.04
HDAC5-203ENST00000586339 MAP7D1Q3KQU3 841 aa14.79□□□□□ -0.04
HDAC5-203ENST00000586339 C10orf120Q5SQS8 335 aa14.79□□□□□ -0.04
HDAC5-203ENST00000586339 ZNF658Q5TYW1 1059 aaPredicted RBP14.79□□□□□ -0.04
HDAC5-203ENST00000586339 DAB2IPQ5VWQ8 1189 aa14.79□□□□□ -0.04
HDAC5-203ENST00000586339 ZC3H3Q8IXZ2 948 aaKnown RBP14.79□□□□□ -0.04
HDAC5-203ENST00000586339 SMYD4Q8IYR2 804 aaPredicted RBP14.79□□□□□ -0.04
HDAC5-203ENST00000586339 FMR1NBQ8N0W7 255 aaPredicted RBP14.79□□□□□ -0.04
HDAC5-203ENST00000586339 ARHGAP18Q8N392 663 aa14.79□□□□□ -0.04
HDAC5-203ENST00000586339 SEMA4DQ92854 862 aa14.79□□□□□ -0.04
HDAC5-203ENST00000586339 TMEM176AQ96HP8 235 aa14.79□□□□□ -0.04
HDAC5-203ENST00000586339 TSG101Q99816 390 aa14.79□□□□□ -0.04
HDAC5-203ENST00000586339 ADAMTS9Q9P2N4 1935 aa14.78□□□□□ -0.04
HDAC5-203ENST00000586339 STC2O76061 302 aa14.78□□□□□ -0.04
HDAC5-203ENST00000586339 PMLP29590 882 aa14.78□□□□□ -0.04
HDAC5-203ENST00000586339 CHKAP35790 457 aa14.78□□□□□ -0.04
HDAC5-203ENST00000586339 DGKGP49619 791 aa14.78□□□□□ -0.04
HDAC5-203ENST00000586339 RAD23BP54727 409 aa14.78□□□□□ -0.04
HDAC5-203ENST00000586339 COG7P83436 770 aa14.78□□□□□ -0.04
HDAC5-203ENST00000586339 FKBP3Q00688 224 aaKnown RBP14.78□□□□□ -0.04
HDAC5-203ENST00000586339 PNOCQ13519 176 aa14.78□□□□□ -0.04
HDAC5-203ENST00000586339 ZNF394Q53GI3 561 aa14.78□□□□□ -0.04
HDAC5-203ENST00000586339 RAB41Q5JT25 222 aa14.78□□□□□ -0.04
HDAC5-203ENST00000586339 TPGS1Q6ZTW0 290 aa14.78□□□□□ -0.04
HDAC5-203ENST00000586339 SCD5Q86SK9 330 aa14.78□□□□□ -0.04
HDAC5-203ENST00000586339 SLC4A11Q8NBS3 891 aa14.78□□□□□ -0.04
HDAC5-203ENST00000586339 RLN3Q8WXF3 142 aa14.78□□□□□ -0.04
HDAC5-203ENST00000586339 HEXIM2Q96MH2 286 aaKnown RBP14.78□□□□□ -0.04
HDAC5-203ENST00000586339 GABRG3Q99928 467 aa14.78□□□□□ -0.04
HDAC5-203ENST00000586339 DCLK3Q9C098 648 aa14.78□□□□□ -0.04
HDAC5-203ENST00000586339 COQ4Q9Y3A0 265 aa14.78□□□□□ -0.04
HDAC5-203ENST00000586339 GFRA2O00451 464 aa14.77□□□□□ -0.05
HDAC5-203ENST00000586339 MDM4O15151 490 aa14.77□□□□□ -0.05
HDAC5-203ENST00000586339 ZBTB24O43167 697 aaPredicted RBP14.77□□□□□ -0.05
HDAC5-203ENST00000586339 MAP3K13O43283 966 aa14.77□□□□□ -0.05
HDAC5-203ENST00000586339 AP5Z1O43299 807 aa14.77□□□□□ -0.05
HDAC5-203ENST00000586339 KCNK5O95279 499 aa14.77□□□□□ -0.05
HDAC5-203ENST00000586339 SMC2O95347 1197 aa14.77□□□□□ -0.05
HDAC5-203ENST00000586339 GABRG2P18507 467 aa14.77□□□□□ -0.05
HDAC5-203ENST00000586339 KCNA4P22459 653 aa14.77□□□□□ -0.05
HDAC5-203ENST00000586339 PRCPP42785 496 aa14.77□□□□□ -0.05
HDAC5-203ENST00000586339 YWHAEP62258 255 aaKnown RBP14.77□□□□□ -0.05
HDAC5-203ENST00000586339 SHC2P98077 582 aa14.77□□□□□ -0.05
HDAC5-203ENST00000586339 LRRC63Q05C16 580 aa14.77□□□□□ -0.05
HDAC5-203ENST00000586339 LMAN2Q12907 356 aa14.77□□□□□ -0.05
HDAC5-203ENST00000586339 DCAF17Q5H9S7 520 aaPredicted RBP14.77□□□□□ -0.05
HDAC5-203ENST00000586339 TCERG1LQ5VWI1 586 aa14.77□□□□□ -0.05
HDAC5-203ENST00000586339 EGFLAMQ63HQ2 1017 aa14.77□□□□□ -0.05
HDAC5-203ENST00000586339 SDE2Q6IQ49 451 aa14.77□□□□□ -0.05
HDAC5-203ENST00000586339 SLC36A4Q6YBV0 504 aa14.77□□□□□ -0.05
HDAC5-203ENST00000586339 SYT12Q8IV01 421 aa14.77□□□□□ -0.05
HDAC5-203ENST00000586339 CHPFQ8IZ52 775 aa14.77□□□□□ -0.05
HDAC5-203ENST00000586339 PGBD3Q8N328 593 aa14.77□□□□□ -0.05
HDAC5-203ENST00000586339 ANKRD52Q8NB46 1076 aa14.77□□□□□ -0.05
HDAC5-203ENST00000586339 SPATA20Q8TB22 786 aa14.77□□□□□ -0.05
HDAC5-203ENST00000586339 PIGKQ92643 395 aa14.77□□□□□ -0.05
HDAC5-203ENST00000586339 EEF2KMTQ96G04 330 aa14.77□□□□□ -0.05
HDAC5-203ENST00000586339 ARID3AQ99856 593 aa14.77□□□□□ -0.05
HDAC5-203ENST00000586339 CD248Q9HCU0 757 aa14.77□□□□□ -0.05
HDAC5-203ENST00000586339 ZDHHC4Q9NPG8 344 aa14.77□□□□□ -0.05
HDAC5-203ENST00000586339 TMEM9BQ9NQ34 198 aa14.77□□□□□ -0.05
HDAC5-203ENST00000586339 MBD1Q9UIS9 605 aaPredicted RBP14.77□□□□□ -0.05
HDAC5-203ENST00000586339 FBXO10Q9UK96 956 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms