RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 CHURC1-FNTBB4DL54 471 aa10.22□□□□□ -0.77
TNFRSF1A-214ENST00000543048 TULP2O00295 520 aa10.22□□□□□ -0.77
TNFRSF1A-214ENST00000543048 O00370 1275 aa10.22□□□□□ -0.77
TNFRSF1A-214ENST00000543048 SCAMP3O14828 347 aaKnown RBP10.22□□□□□ -0.77
TNFRSF1A-214ENST00000543048 LILRB5O75023 590 aa10.22□□□□□ -0.77
TNFRSF1A-214ENST00000543048 ZBED1O96006 694 aa10.22□□□□□ -0.77
TNFRSF1A-214ENST00000543048 ADH1CP00326 375 aa10.22□□□□□ -0.77
TNFRSF1A-214ENST00000543048 SETSIPP0DME0 302 aa10.22□□□□□ -0.77
TNFRSF1A-214ENST00000543048 IRF1P10914 325 aa10.22□□□□□ -0.77
TNFRSF1A-214ENST00000543048 HOXA6P31267 233 aa10.22□□□□□ -0.77
TNFRSF1A-214ENST00000543048 OPRD1P41143 372 aa10.22□□□□□ -0.77
TNFRSF1A-214ENST00000543048 SLC6A11P48066 632 aa10.22□□□□□ -0.77
TNFRSF1A-214ENST00000543048 TKTL1P51854 596 aa10.22□□□□□ -0.77
TNFRSF1A-214ENST00000543048 COG7P83436 770 aa10.22□□□□□ -0.77
TNFRSF1A-214ENST00000543048 GAD2Q05329 585 aa10.22□□□□□ -0.77
TNFRSF1A-214ENST00000543048 PKDCCQ504Y2 493 aa10.22□□□□□ -0.77
TNFRSF1A-214ENST00000543048 LY6G5CQ5SRR4 150 aa10.22□□□□□ -0.77
TNFRSF1A-214ENST00000543048 NAIF1Q69YI7 327 aaPredicted RBP10.22□□□□□ -0.77
TNFRSF1A-214ENST00000543048 ENOSF1Q7L5Y1 443 aa10.22□□□□□ -0.77
TNFRSF1A-214ENST00000543048 FAM114A1Q8IWE2 563 aa10.22□□□□□ -0.77
TNFRSF1A-214ENST00000543048 BBS7Q8IWZ6 715 aa10.22□□□□□ -0.77
TNFRSF1A-214ENST00000543048 RBBP8NLQ8NC74 664 aaPredicted RBP10.22□□□□□ -0.77
TNFRSF1A-214ENST00000543048 KCTD13Q8WZ19 329 aa10.22□□□□□ -0.77
TNFRSF1A-214ENST00000543048 TFAP2BQ92481 460 aa10.22□□□□□ -0.77
TNFRSF1A-214ENST00000543048 WBP2Q969T9 261 aa10.22□□□□□ -0.77
TNFRSF1A-214ENST00000543048 KREMEN1Q96MU8 473 aa10.22□□□□□ -0.77
TNFRSF1A-214ENST00000543048 PNKPQ96T60 521 aa10.22□□□□□ -0.77
TNFRSF1A-214ENST00000543048 CRACR2AQ9BSW2 395 aa10.22□□□□□ -0.77
TNFRSF1A-214ENST00000543048 LRRC4Q9HBW1 653 aa10.22□□□□□ -0.77
TNFRSF1A-214ENST00000543048 LSM7Q9UK45 103 aaKnown RBP10.22□□□□□ -0.77
TNFRSF1A-214ENST00000543048 NUDT5Q9UKK9 219 aa10.22□□□□□ -0.77
TNFRSF1A-214ENST00000543048 CNTN6Q9UQ52 1028 aa10.22□□□□□ -0.77
TNFRSF1A-214ENST00000543048 ZNF510Q9Y2H8 683 aa10.22□□□□□ -0.77
TNFRSF1A-214ENST00000543048 SPTBN4Q9H254 2564 aa10.22□□□□□ -0.77
TNFRSF1A-214ENST00000543048 OTOGLQ3ZCN5 2332 aa10.22□□□□□ -0.77
TNFRSF1A-214ENST00000543048 CEP192Q8TEP8 1941 aa10.21□□□□□ -0.77
TNFRSF1A-214ENST00000543048 ABCA7Q8IZY2 2146 aa10.21□□□□□ -0.77
TNFRSF1A-214ENST00000543048 GTPBP10A4D1E9 387 aaKnown RBP10.21□□□□□ -0.77
TNFRSF1A-214ENST00000543048 K7EQS6 105 aa10.21□□□□□ -0.77
TNFRSF1A-214ENST00000543048 K7ESF4 209 aa10.21□□□□□ -0.77
TNFRSF1A-214ENST00000543048 MDM4O15151 490 aa10.21□□□□□ -0.77
TNFRSF1A-214ENST00000543048 GREM1O60565 184 aa10.21□□□□□ -0.77
TNFRSF1A-214ENST00000543048 RNF40O75150 1001 aa10.21□□□□□ -0.77
TNFRSF1A-214ENST00000543048 MBD3O95983 291 aa10.21□□□□□ -0.77
TNFRSF1A-214ENST00000543048 APODP05090 189 aa10.21□□□□□ -0.77
TNFRSF1A-214ENST00000543048 ADH5P11766 374 aa10.21□□□□□ -0.77
TNFRSF1A-214ENST00000543048 KRT5P13647 590 aa10.21□□□□□ -0.77
TNFRSF1A-214ENST00000543048 SLC9A1P19634 815 aa10.21□□□□□ -0.77
TNFRSF1A-214ENST00000543048 EIF2DP41214 584 aaKnown RBP10.21□□□□□ -0.77
TNFRSF1A-214ENST00000543048 ZNF132P52740 706 aa10.21□□□□□ -0.77
TNFRSF1A-214ENST00000543048 MFAP3P55082 362 aa10.21□□□□□ -0.77
TNFRSF1A-214ENST00000543048 YWHAGP61981 247 aaKnown RBP eCLIP10.21□□□□□ -0.77
TNFRSF1A-214ENST00000543048 EXOC3L4Q17RC7 722 aa10.21□□□□□ -0.77
TNFRSF1A-214ENST00000543048 GAB4Q2WGN9 574 aa10.21□□□□□ -0.77
TNFRSF1A-214ENST00000543048 DPCR1Q3MIW9 517 aa10.21□□□□□ -0.77
TNFRSF1A-214ENST00000543048 BTBD8Q5XKL5 378 aa10.21□□□□□ -0.77
TNFRSF1A-214ENST00000543048 RSRC2Q7L4I2 434 aaKnown RBP10.21□□□□□ -0.77
TNFRSF1A-214ENST00000543048 SUMF1Q8NBK3 374 aa10.21□□□□□ -0.77
TNFRSF1A-214ENST00000543048 GPT2Q8TD30 523 aa10.21□□□□□ -0.77
TNFRSF1A-214ENST00000543048 SLC35F5Q8WV83 523 aa10.21□□□□□ -0.77
TNFRSF1A-214ENST00000543048 NDRG1Q92597 394 aaKnown RBP10.21□□□□□ -0.77
TNFRSF1A-214ENST00000543048 HSFY1Q96LI6 401 aa10.21□□□□□ -0.77
TNFRSF1A-214ENST00000543048 ULBP1Q9BZM6 244 aa10.21□□□□□ -0.77
TNFRSF1A-214ENST00000543048 DCLK3Q9C098 648 aa10.21□□□□□ -0.77
TNFRSF1A-214ENST00000543048 SPHK2Q9NRA0 654 aa10.21□□□□□ -0.77
TNFRSF1A-214ENST00000543048 C2orf42Q9NWW7 574 aa10.21□□□□□ -0.77
TNFRSF1A-214ENST00000543048 WDR35Q9P2L0 1181 aa10.21□□□□□ -0.77
TNFRSF1A-214ENST00000543048 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.21□□□□□ -0.77
TNFRSF1A-214ENST00000543048 SLC8A2Q9UPR5 921 aa10.21□□□□□ -0.77
TNFRSF1A-214ENST00000543048 THADAQ6YHU6 1953 aa10.21□□□□□ -0.78
TNFRSF1A-214ENST00000543048 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.2□□□□□ -0.78
TNFRSF1A-214ENST00000543048 STC2O76061 302 aa10.2□□□□□ -0.78
TNFRSF1A-214ENST00000543048 KAT7O95251 611 aa10.2□□□□□ -0.78
TNFRSF1A-214ENST00000543048 CALCAP01258 141 aa10.2□□□□□ -0.78
TNFRSF1A-214ENST00000543048 LCP1P13796 627 aa10.2□□□□□ -0.78
TNFRSF1A-214ENST00000543048 PRKCSHP14314 528 aaPredicted RBP10.2□□□□□ -0.78
TNFRSF1A-214ENST00000543048 BRD2P25440 801 aaKnown RBP10.2□□□□□ -0.78
TNFRSF1A-214ENST00000543048 PON1P27169 355 aa10.2□□□□□ -0.78
TNFRSF1A-214ENST00000543048 CNR2P34972 360 aa10.2□□□□□ -0.78
TNFRSF1A-214ENST00000543048 GRIA2P42262 883 aa10.2□□□□□ -0.78
TNFRSF1A-214ENST00000543048 TNFRSF4P43489 277 aa10.2□□□□□ -0.78
TNFRSF1A-214ENST00000543048 FNTBP49356 437 aa10.2□□□□□ -0.78
TNFRSF1A-214ENST00000543048 MRPS21P82921 87 aaKnown RBP10.2□□□□□ -0.78
TNFRSF1A-214ENST00000543048 ADIGQ0VDE8 80 aa10.2□□□□□ -0.78
TNFRSF1A-214ENST00000543048 EFEMP1Q12805 493 aa10.2□□□□□ -0.78
TNFRSF1A-214ENST00000543048 MAN2A1Q16706 1144 aa10.2□□□□□ -0.78
TNFRSF1A-214ENST00000543048 SKOR2Q2VWA4 1001 aaPredicted RBP10.2□□□□□ -0.78
TNFRSF1A-214ENST00000543048 ANO4Q32M45 955 aa10.2□□□□□ -0.78
TNFRSF1A-214ENST00000543048 PREPLQ4J6C6 727 aaPredicted RBP10.2□□□□□ -0.78
TNFRSF1A-214ENST00000543048 VWA3BQ502W6 1294 aa10.2□□□□□ -0.78
TNFRSF1A-214ENST00000543048 BSPRYQ5W0U4 402 aa10.2□□□□□ -0.78
TNFRSF1A-214ENST00000543048 SMYD5Q6GMV2 418 aa10.2□□□□□ -0.78
TNFRSF1A-214ENST00000543048 PMF1Q6P1K2 205 aa10.2□□□□□ -0.78
TNFRSF1A-214ENST00000543048 PKN3Q6P5Z2 889 aa10.2□□□□□ -0.78
TNFRSF1A-214ENST00000543048 TRIM65Q6PJ69 517 aa10.2□□□□□ -0.78
TNFRSF1A-214ENST00000543048 LONP2Q86WA8 852 aa10.2□□□□□ -0.78
TNFRSF1A-214ENST00000543048 TMEM25Q86YD3 366 aa10.2□□□□□ -0.78
TNFRSF1A-214ENST00000543048 MIB1Q86YT6 1006 aa10.2□□□□□ -0.78
TNFRSF1A-214ENST00000543048 SIX6OS1Q8N1H7 587 aa10.2□□□□□ -0.78
TNFRSF1A-214ENST00000543048 SCML4Q8N228 414 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms