RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 TBX2Q13207 712 aaPredicted RBP20.33■□□□□ 0.85
DDX55-207ENST00000540763 GRM2Q14416 872 aa20.33■□□□□ 0.85
DDX55-207ENST00000540763 HGSNATQ68CP4 663 aa20.33■□□□□ 0.85
DDX55-207ENST00000540763 HFE2Q6ZVN8 426 aa20.33■□□□□ 0.85
DDX55-207ENST00000540763 FAM183BPQ6ZVS7 135 aa20.33■□□□□ 0.85
DDX55-207ENST00000540763 GPIHBP1Q8IV16 184 aa20.33■□□□□ 0.85
DDX55-207ENST00000540763 OLIG1Q8TAK6 271 aa20.33■□□□□ 0.85
DDX55-207ENST00000540763 RIN3Q8TB24 985 aa20.33■□□□□ 0.85
DDX55-207ENST00000540763 CPA5Q8WXQ8 436 aa20.33■□□□□ 0.85
DDX55-207ENST00000540763 FAM149B1Q96BN6 582 aa20.33■□□□□ 0.85
DDX55-207ENST00000540763 LRRC3BQ96PB8 259 aa20.33■□□□□ 0.85
DDX55-207ENST00000540763 WNT16Q9UBV4 365 aa20.33■□□□□ 0.85
DDX55-207ENST00000540763 ARNTLO00327 626 aa20.32■□□□□ 0.84
DDX55-207ENST00000540763 MFAP3LO75121 409 aa20.32■□□□□ 0.84
DDX55-207ENST00000540763 TBX18O95935 607 aa20.32■□□□□ 0.84
DDX55-207ENST00000540763 GDI1P31150 447 aa20.32■□□□□ 0.84
DDX55-207ENST00000540763 YWHAZP63104 245 aaKnown RBP20.32■□□□□ 0.84
DDX55-207ENST00000540763 GPC5P78333 572 aa20.32■□□□□ 0.84
DDX55-207ENST00000540763 SLC6A3Q01959 620 aa20.32■□□□□ 0.84
DDX55-207ENST00000540763 SIGLEC14Q08ET2 396 aa20.32■□□□□ 0.84
DDX55-207ENST00000540763 NNTQ13423 1086 aa20.32■□□□□ 0.84
DDX55-207ENST00000540763 PDGFRLQ15198 375 aa20.32■□□□□ 0.84
DDX55-207ENST00000540763 TDRD12Q587J7 1177 aaKnown RBP20.32■□□□□ 0.84
DDX55-207ENST00000540763 OR6B2Q6IFH4 312 aa20.32■□□□□ 0.84
DDX55-207ENST00000540763 CC2D1AQ6P1N0 951 aaPredicted RBP20.32■□□□□ 0.84
DDX55-207ENST00000540763 ARCQ7LC44 396 aa20.32■□□□□ 0.84
DDX55-207ENST00000540763 ZNF571Q7Z3V5 609 aaPredicted RBP20.32■□□□□ 0.84
DDX55-207ENST00000540763 TMC6Q7Z403 805 aa20.32■□□□□ 0.84
DDX55-207ENST00000540763 VPS36Q86VN1 386 aa20.32■□□□□ 0.84
DDX55-207ENST00000540763 XYLT1Q86Y38 959 aa20.32■□□□□ 0.84
DDX55-207ENST00000540763 CNGA4Q8IV77 575 aa20.32■□□□□ 0.84
DDX55-207ENST00000540763 ST13P5Q8NFI4 369 aaPredicted RBP20.32■□□□□ 0.84
DDX55-207ENST00000540763 OR8K1Q8NGG5 319 aa20.32■□□□□ 0.84
DDX55-207ENST00000540763 OTUB2Q96DC9 234 aa20.32■□□□□ 0.84
DDX55-207ENST00000540763 SMOC2Q9H3U7 446 aa20.32■□□□□ 0.84
DDX55-207ENST00000540763 BRD9Q9H8M2 597 aa20.32■□□□□ 0.84
DDX55-207ENST00000540763 SEPT11Q9NVA2 429 aaKnown RBP20.32■□□□□ 0.84
DDX55-207ENST00000540763 MARCH2Q9P0N8 246 aa20.32■□□□□ 0.84
DDX55-207ENST00000540763 WDR35Q9P2L0 1181 aa20.32■□□□□ 0.84
DDX55-207ENST00000540763 HBS1LQ9Y450 684 aaKnown RBP20.32■□□□□ 0.84
DDX55-207ENST00000540763 ZNF318Q5VUA4 2279 aa20.32■□□□□ 0.84
DDX55-207ENST00000540763 SLC9A3R1O14745 358 aaPredicted RBP20.31■□□□□ 0.84
DDX55-207ENST00000540763 NARSO43776 548 aaKnown RBP20.31■□□□□ 0.84
DDX55-207ENST00000540763 CALB1P05937 261 aa20.31■□□□□ 0.84
DDX55-207ENST00000540763 FYNP06241 537 aa20.31■□□□□ 0.84
DDX55-207ENST00000540763 GZMAP12544 262 aa20.31■□□□□ 0.84
DDX55-207ENST00000540763 KPNA1P52294 538 aaPredicted RBP20.31■□□□□ 0.84
DDX55-207ENST00000540763 MLLT6P55198 1093 aaPredicted RBP20.31■□□□□ 0.84
DDX55-207ENST00000540763 EFEMP1Q12805 493 aa20.31■□□□□ 0.84
DDX55-207ENST00000540763 OSCP1Q8WVF1 389 aa20.31■□□□□ 0.84
DDX55-207ENST00000540763 EDEM1Q92611 657 aa20.31■□□□□ 0.84
DDX55-207ENST00000540763 VCPIP1Q96JH7 1222 aa20.31■□□□□ 0.84
DDX55-207ENST00000540763 SLC2A13Q96QE2 648 aa20.31■□□□□ 0.84
DDX55-207ENST00000540763 FAM83CQ9BQN1 747 aa20.31■□□□□ 0.84
DDX55-207ENST00000540763 SMPD4Q9NXE4 827 aa20.31■□□□□ 0.84
DDX55-207ENST00000540763 CFAP97Q9P2B7 532 aa20.31■□□□□ 0.84
DDX55-207ENST00000540763 TBC1D14Q9P2M4 693 aa20.31■□□□□ 0.84
DDX55-207ENST00000540763 RASAL2Q9UJF2 1139 aa20.31■□□□□ 0.84
DDX55-207ENST00000540763 NUDT5Q9UKK9 219 aa20.31■□□□□ 0.84
DDX55-207ENST00000540763 SH3BP1Q9Y3L3 701 aa20.31■□□□□ 0.84
DDX55-207ENST00000540763 COL4A3Q01955 1670 aa20.31■□□□□ 0.84
DDX55-207ENST00000540763 DAB1O75553 588 aa20.3■□□□□ 0.84
DDX55-207ENST00000540763 NCAM1P13591 858 aa20.3■□□□□ 0.84
DDX55-207ENST00000540763 C1QBPQ07021 282 aaKnown RBP20.3■□□□□ 0.84
DDX55-207ENST00000540763 PTP4A2Q12974 167 aa20.3■□□□□ 0.84
DDX55-207ENST00000540763 ACAD10Q6JQN1 1059 aa20.3■□□□□ 0.84
DDX55-207ENST00000540763 HTR3DQ70Z44 454 aa20.3■□□□□ 0.84
DDX55-207ENST00000540763 MON1BQ7L1V2 547 aa20.3■□□□□ 0.84
DDX55-207ENST00000540763 SLC30A5Q8TAD4 765 aa20.3■□□□□ 0.84
DDX55-207ENST00000540763 PLD4Q96BZ4 506 aa20.3■□□□□ 0.84
DDX55-207ENST00000540763 MSANTD3Q96H12 275 aa20.3■□□□□ 0.84
DDX55-207ENST00000540763 PIWIL1Q96J94 861 aaKnown RBP20.3■□□□□ 0.84
DDX55-207ENST00000540763 ABHD10Q9NUJ1 306 aa20.3■□□□□ 0.84
DDX55-207ENST00000540763 TMEM51Q9NW97 253 aa20.3■□□□□ 0.84
DDX55-207ENST00000540763 RRN3Q9NYV6 651 aa20.3■□□□□ 0.84
DDX55-207ENST00000540763 LSM7Q9UK45 103 aaKnown RBP20.3■□□□□ 0.84
DDX55-207ENST00000540763 CAPN9O14815 690 aa20.29■□□□□ 0.84
DDX55-207ENST00000540763 MDM4O15151 490 aa20.29■□□□□ 0.84
DDX55-207ENST00000540763 STC2O76061 302 aa20.29■□□□□ 0.84
DDX55-207ENST00000540763 GLULP15104 373 aa20.29■□□□□ 0.84
DDX55-207ENST00000540763 CDC25BP30305 580 aa20.29■□□□□ 0.84
DDX55-207ENST00000540763 IFNAR2P48551 515 aa20.29■□□□□ 0.84
DDX55-207ENST00000540763 RING1Q06587 406 aa20.29■□□□□ 0.84
DDX55-207ENST00000540763 TSR1Q2NL82 804 aaKnown RBP20.29■□□□□ 0.84
DDX55-207ENST00000540763 MMS22LQ6ZRQ5 1243 aa20.29■□□□□ 0.84
DDX55-207ENST00000540763 MIB1Q86YT6 1006 aa20.29■□□□□ 0.84
DDX55-207ENST00000540763 ATP2A3Q93084 1043 aa20.29■□□□□ 0.84
DDX55-207ENST00000540763 SERPINB11Q96P15 392 aa20.29■□□□□ 0.84
DDX55-207ENST00000540763 C11orf70Q9BRQ4 267 aa20.29■□□□□ 0.84
DDX55-207ENST00000540763 DCLK3Q9C098 648 aa20.29■□□□□ 0.84
DDX55-207ENST00000540763 KCNH6Q9H252 994 aa20.29■□□□□ 0.84
DDX55-207ENST00000540763 ZNHIT6Q9NWK9 470 aaKnown RBP20.29■□□□□ 0.84
DDX55-207ENST00000540763 DUS2Q9NX74 493 aaKnown RBP20.29■□□□□ 0.84
DDX55-207ENST00000540763 ADAM22Q9P0K1 906 aa20.29■□□□□ 0.84
DDX55-207ENST00000540763 ZNF510Q9Y2H8 683 aa20.29■□□□□ 0.84
DDX55-207ENST00000540763 TECTAO75443 2155 aa20.28■□□□□ 0.84
DDX55-207ENST00000540763 SSU72P8A0A1W2PR75 194 aa20.28■□□□□ 0.84
DDX55-207ENST00000540763 AKR1B15C9JRZ8 316 aaPredicted RBP20.28■□□□□ 0.84
DDX55-207ENST00000540763 DDX3XO00571 662 aaKnown RBP eCLIP20.28■□□□□ 0.844e-17■■■□□ 15.8
DDX55-207ENST00000540763 GREM1O60565 184 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms