RNA–Protein interactions for RNA: ENST00000491395.5

APP-216, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-216ENST00000491395 CBWD3Q5JTY5 395 aa8.72□□□□□ -1.01
APP-216ENST00000491395 CBWD5Q5RIA9 395 aa8.72□□□□□ -1.01
APP-216ENST00000491395 EGFLAMQ63HQ2 1017 aa8.72□□□□□ -1.01
APP-216ENST00000491395 ANKRD40Q6AI12 368 aa8.72□□□□□ -1.01
APP-216ENST00000491395 TOGARAM2Q6ZUX3 1019 aa8.72□□□□□ -1.01
APP-216ENST00000491395 LPCAT2Q7L5N7 544 aa8.72□□□□□ -1.01
APP-216ENST00000491395 CCDC186Q7Z3E2 898 aa8.72□□□□□ -1.01
APP-216ENST00000491395 CYP2U1Q7Z449 544 aa8.72□□□□□ -1.01
APP-216ENST00000491395 TMEFF1Q8IYR6 380 aa8.72□□□□□ -1.01
APP-216ENST00000491395 TERB1Q8NA31 727 aa8.72□□□□□ -1.01
APP-216ENST00000491395 DDX1Q92499 740 aaKnown RBP8.72□□□□□ -1.01
APP-216ENST00000491395 PIGKQ92643 395 aa8.72□□□□□ -1.01
APP-216ENST00000491395 BHMTQ93088 406 aa8.72□□□□□ -1.01
APP-216ENST00000491395 TMEM176AQ96HP8 235 aa8.72□□□□□ -1.01
APP-216ENST00000491395 ACOX2Q99424 681 aa8.72□□□□□ -1.01
APP-216ENST00000491395 EDEM2Q9BV94 578 aa8.72□□□□□ -1.01
APP-216ENST00000491395 DNAI2Q9GZS0 605 aa8.72□□□□□ -1.01
APP-216ENST00000491395 PNPLA8Q9NP80 782 aa8.72□□□□□ -1.01
APP-216ENST00000491395 MARK1Q9P0L2 795 aa8.72□□□□□ -1.01
APP-216ENST00000491395 WDR35Q9P2L0 1181 aa8.72□□□□□ -1.01
APP-216ENST00000491395 DNMT3LQ9UJW3 386 aa8.72□□□□□ -1.01
APP-216ENST00000491395 LSM7Q9UK45 103 aaKnown RBP8.72□□□□□ -1.01
APP-216ENST00000491395 USP3Q9Y6I4 520 aa8.72□□□□□ -1.01
APP-216ENST00000491395 PTPRDP23468 1912 aa8.72□□□□□ -1.01
APP-216ENST00000491395 GREB1Q4ZG55 1949 aa8.72□□□□□ -1.01
APP-216ENST00000491395 ABCA7Q8IZY2 2146 aa8.71□□□□□ -1.01
APP-216ENST00000491395 GON4LQ3T8J9 2241 aa8.71□□□□□ -1.02
APP-216ENST00000491395 A0A1W2PQF6 199 aa8.71□□□□□ -1.02
APP-216ENST00000491395 GOLGA6L4A6NEF3 574 aa8.71□□□□□ -1.02
APP-216ENST00000491395 PRRT4C9JH25 899 aa8.71□□□□□ -1.02
APP-216ENST00000491395 KHNYNO15037 678 aaKnown RBP8.71□□□□□ -1.02
APP-216ENST00000491395 CACNG3O60359 315 aa8.71□□□□□ -1.02
APP-216ENST00000491395 STX10O60499 249 aa8.71□□□□□ -1.02
APP-216ENST00000491395 STC2O76061 302 aa8.71□□□□□ -1.02
APP-216ENST00000491395 KCNK5O95279 499 aa8.71□□□□□ -1.02
APP-216ENST00000491395 HMBSP08397 361 aa8.71□□□□□ -1.02
APP-216ENST00000491395 RALAP11233 206 aa8.71□□□□□ -1.02
APP-216ENST00000491395 GABRG2P18507 467 aa8.71□□□□□ -1.02
APP-216ENST00000491395 NTSR1P30989 418 aa8.71□□□□□ -1.02
APP-216ENST00000491395 PSEN1P49768 467 aa8.71□□□□□ -1.02
APP-216ENST00000491395 IRX4P78413 519 aa8.71□□□□□ -1.02
APP-216ENST00000491395 GOLGA8FQ08AF8 430 aa8.71□□□□□ -1.02
APP-216ENST00000491395 GOLGA8DPQ0D2H9 430 aa8.71□□□□□ -1.02
APP-216ENST00000491395 EFEMP1Q12805 493 aa8.71□□□□□ -1.02
APP-216ENST00000491395 LRMPQ12912 555 aa8.71□□□□□ -1.02
APP-216ENST00000491395 GOLGA7BQ2TAP0 167 aa8.71□□□□□ -1.02
APP-216ENST00000491395 PREPLQ4J6C6 727 aaPredicted RBP8.71□□□□□ -1.02
APP-216ENST00000491395 DCAF17Q5H9S7 520 aaPredicted RBP8.71□□□□□ -1.02
APP-216ENST00000491395 ZNF658Q5TYW1 1059 aaPredicted RBP8.71□□□□□ -1.02
APP-216ENST00000491395 TCERG1LQ5VWI1 586 aa8.71□□□□□ -1.02
APP-216ENST00000491395 ARHGAP17Q68EM7 881 aa8.71□□□□□ -1.02
APP-216ENST00000491395 KLHDC10Q6PID8 442 aa8.71□□□□□ -1.02
APP-216ENST00000491395 Q6ZNB5 142 aa8.71□□□□□ -1.02
APP-216ENST00000491395 NUDT18Q6ZVK8 323 aa8.71□□□□□ -1.02
APP-216ENST00000491395 TRMT11Q7Z4G4 463 aaKnown RBP8.71□□□□□ -1.02
APP-216ENST00000491395 PIGZQ86VD9 579 aa8.71□□□□□ -1.02
APP-216ENST00000491395 DEFB119Q8N690 84 aa8.71□□□□□ -1.02
APP-216ENST00000491395 ANKRD52Q8NB46 1076 aa8.71□□□□□ -1.02
APP-216ENST00000491395 ENGASEQ8NFI3 743 aa8.71□□□□□ -1.02
APP-216ENST00000491395 KCNV2Q8TDN2 545 aa8.71□□□□□ -1.02
APP-216ENST00000491395 NDRG1Q92597 394 aaKnown RBP8.71□□□□□ -1.02
APP-216ENST00000491395 CCDC34Q96HJ3 373 aa8.71□□□□□ -1.02
APP-216ENST00000491395 XPO6Q96QU8 1125 aaKnown RBP8.71□□□□□ -1.02
APP-216ENST00000491395 TSG101Q99816 390 aa8.71□□□□□ -1.02
APP-216ENST00000491395 LSM14BQ9BX40 385 aaKnown RBP8.71□□□□□ -1.02
APP-216ENST00000491395 UBXN6Q9BZV1 441 aa8.71□□□□□ -1.02
APP-216ENST00000491395 TMEM74BQ9NUR3 256 aa8.71□□□□□ -1.02
APP-216ENST00000491395 RMND1Q9NWS8 449 aa8.71□□□□□ -1.02
APP-216ENST00000491395 PLK2Q9NYY3 685 aa8.71□□□□□ -1.02
APP-216ENST00000491395 CLIC5Q9NZA1 410 aa8.71□□□□□ -1.02
APP-216ENST00000491395 RASAL2Q9UJF2 1139 aa8.71□□□□□ -1.02
APP-216ENST00000491395 STARD13Q9Y3M8 1113 aa8.71□□□□□ -1.02
APP-216ENST00000491395 CACNA1BQ00975 2339 aa8.71□□□□□ -1.02
APP-216ENST00000491395 LNP1A1A4G5 178 aa8.7□□□□□ -1.02
APP-216ENST00000491395 TRIM49BA6NDI0 452 aa8.7□□□□□ -1.02
APP-216ENST00000491395 WASH3PC4AMC7 463 aa8.7□□□□□ -1.02
APP-216ENST00000491395 TULP2O00295 520 aa8.7□□□□□ -1.02
APP-216ENST00000491395 SLC16A3O15427 465 aaKnown RBP8.7□□□□□ -1.02
APP-216ENST00000491395 SMC2O95347 1197 aa8.7□□□□□ -1.02
APP-216ENST00000491395 HOXB2P14652 356 aa8.7□□□□□ -1.02
APP-216ENST00000491395 DGKGP49619 791 aa8.7□□□□□ -1.02
APP-216ENST00000491395 TKTL1P51854 596 aa8.7□□□□□ -1.02
APP-216ENST00000491395 FKBP3Q00688 224 aaKnown RBP8.7□□□□□ -1.02
APP-216ENST00000491395 PDE4CQ08493 712 aa8.7□□□□□ -1.02
APP-216ENST00000491395 CUL2Q13617 745 aa8.7□□□□□ -1.02
APP-216ENST00000491395 BYSLQ13895 437 aaKnown RBP8.7□□□□□ -1.02
APP-216ENST00000491395 RAB41Q5JT25 222 aa8.7□□□□□ -1.02
APP-216ENST00000491395 ISM2Q6H9L7 571 aa8.7□□□□□ -1.02
APP-216ENST00000491395 SDE2Q6IQ49 451 aa8.7□□□□□ -1.02
APP-216ENST00000491395 KIAA1211LQ6NV74 962 aa8.7□□□□□ -1.02
APP-216ENST00000491395 TADA2BQ86TJ2 420 aa8.7□□□□□ -1.02
APP-216ENST00000491395 ZC3H3Q8IXZ2 948 aaKnown RBP8.7□□□□□ -1.02
APP-216ENST00000491395 CHPFQ8IZ52 775 aa8.7□□□□□ -1.02
APP-216ENST00000491395 ZNF276Q8N554 614 aa8.7□□□□□ -1.02
APP-216ENST00000491395 TTC39CQ8N584 583 aa8.7□□□□□ -1.02
APP-216ENST00000491395 SPATA20Q8TB22 786 aa8.7□□□□□ -1.02
APP-216ENST00000491395 FAXDC2Q96IV6 333 aa8.7□□□□□ -1.02
APP-216ENST00000491395 SPACA7Q96KW9 195 aa8.7□□□□□ -1.02
APP-216ENST00000491395 GSDMAQ96QA5 445 aa8.7□□□□□ -1.02
APP-216ENST00000491395 CDK5RAP1Q96SZ6 601 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms