RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 SIX6OS1Q8N1H7 587 aa16.63■□□□□ 0.25
GABPA-203ENST00000487266 USP33Q8TEY7 942 aa16.63■□□□□ 0.25
GABPA-203ENST00000487266 EDEM1Q92611 657 aa16.63■□□□□ 0.25
GABPA-203ENST00000487266 EXOC4Q96A65 974 aa16.63■□□□□ 0.25
GABPA-203ENST00000487266 OTUB2Q96DC9 234 aa16.63■□□□□ 0.25
GABPA-203ENST00000487266 IPO9Q96P70 1041 aaKnown RBP16.63■□□□□ 0.25
GABPA-203ENST00000487266 PNKPQ96T60 521 aa16.63■□□□□ 0.25
GABPA-203ENST00000487266 ARHGEF4Q9NR80 690 aa16.63■□□□□ 0.25
GABPA-203ENST00000487266 LSM7Q9UK45 103 aaKnown RBP16.63■□□□□ 0.25
GABPA-203ENST00000487266 SLC8A2Q9UPR5 921 aa16.63■□□□□ 0.25
GABPA-203ENST00000487266 DCHS1Q96JQ0 3298 aa16.63■□□□□ 0.25
GABPA-203ENST00000487266 BECN2A8MW95 431 aa16.62■□□□□ 0.25
GABPA-203ENST00000487266 NEDD8-MDP1E9PL57 170 aa16.62■□□□□ 0.25
GABPA-203ENST00000487266 HOXC11O43248 304 aaPredicted RBP16.62■□□□□ 0.25
GABPA-203ENST00000487266 ATG13O75143 517 aa16.62■□□□□ 0.25
GABPA-203ENST00000487266 TULP3O75386 442 aa16.62■□□□□ 0.25
GABPA-203ENST00000487266 GOLGA8FQ08AF8 430 aa16.62■□□□□ 0.25
GABPA-203ENST00000487266 GOLGA8DPQ0D2H9 430 aa16.62■□□□□ 0.25
GABPA-203ENST00000487266 DMC1Q14565 340 aa16.62■□□□□ 0.25
GABPA-203ENST00000487266 ARHGAP44Q17R89 818 aa16.62■□□□□ 0.25
GABPA-203ENST00000487266 EMC10Q5UCC4 262 aa16.62■□□□□ 0.25
GABPA-203ENST00000487266 TADA2BQ86TJ2 420 aa16.62■□□□□ 0.25
GABPA-203ENST00000487266 CCDC33Q8N5R6 958 aa16.62■□□□□ 0.25
GABPA-203ENST00000487266 SLC35F5Q8WV83 523 aa16.62■□□□□ 0.25
GABPA-203ENST00000487266 GBP4Q96PP9 640 aa16.62■□□□□ 0.25
GABPA-203ENST00000487266 THAP9Q9H5L6 903 aa16.62■□□□□ 0.25
GABPA-203ENST00000487266 PLK2Q9NYY3 685 aa16.62■□□□□ 0.25
GABPA-203ENST00000487266 MARCH2Q9P0N8 246 aa16.62■□□□□ 0.25
GABPA-203ENST00000487266 KIAA1257Q9ULG3 409 aa16.62■□□□□ 0.25
GABPA-203ENST00000487266 CNTN6Q9UQ52 1028 aa16.62■□□□□ 0.25
GABPA-203ENST00000487266 SPAG17Q6Q759 2223 aa16.61■□□□□ 0.25
GABPA-203ENST00000487266 SLC12A8A0AV02 714 aa16.61■□□□□ 0.25
GABPA-203ENST00000487266 MSI1O43347 362 aaKnown RBP16.61■□□□□ 0.25
GABPA-203ENST00000487266 APODP05090 189 aa16.61■□□□□ 0.25
GABPA-203ENST00000487266 PNMA6AP0CW24 399 aaPredicted RBP16.61■□□□□ 0.25
GABPA-203ENST00000487266 HNRNPLP14866 589 aaKnown RBP eCLIP16.61■□□□□ 0.25
GABPA-203ENST00000487266 PON1P27169 355 aa16.61■□□□□ 0.25
GABPA-203ENST00000487266 CORO1AP31146 461 aaKnown RBP16.61■□□□□ 0.25
GABPA-203ENST00000487266 TIE1P35590 1138 aa16.61■□□□□ 0.25
GABPA-203ENST00000487266 EIF2DP41214 584 aaKnown RBP16.61■□□□□ 0.25
GABPA-203ENST00000487266 DAOAP59103 153 aa16.61■□□□□ 0.25
GABPA-203ENST00000487266 CNGA2Q16280 664 aa16.61■□□□□ 0.25
GABPA-203ENST00000487266 MAN2A1Q16706 1144 aa16.61■□□□□ 0.25
GABPA-203ENST00000487266 MIIPQ5JXC2 388 aa16.61■□□□□ 0.25
GABPA-203ENST00000487266 BTBD8Q5XKL5 378 aa16.61■□□□□ 0.25
GABPA-203ENST00000487266 DENND1BQ6P3S1 775 aa16.61■□□□□ 0.25
GABPA-203ENST00000487266 GBP6Q6ZN66 633 aa16.61■□□□□ 0.25
GABPA-203ENST00000487266 SYT13Q7L8C5 426 aa16.61■□□□□ 0.25
GABPA-203ENST00000487266 WDR5BQ86VZ2 330 aa16.61■□□□□ 0.25
GABPA-203ENST00000487266 KIAA2013Q8IYS2 634 aa16.61■□□□□ 0.25
GABPA-203ENST00000487266 ARHGAP18Q8N392 663 aa16.61■□□□□ 0.25
GABPA-203ENST00000487266 ZNF276Q8N554 614 aa16.61■□□□□ 0.25
GABPA-203ENST00000487266 ALLCQ8N6M5 410 aa16.61■□□□□ 0.25
GABPA-203ENST00000487266 KCTD13Q8WZ19 329 aa16.61■□□□□ 0.25
GABPA-203ENST00000487266 RUBCNQ92622 972 aa16.61■□□□□ 0.25
GABPA-203ENST00000487266 ACDQ96AP0 544 aa16.61■□□□□ 0.25
GABPA-203ENST00000487266 BBS2Q9BXC9 721 aa16.61■□□□□ 0.25
GABPA-203ENST00000487266 SIX2Q9NPC8 291 aa16.61■□□□□ 0.25
GABPA-203ENST00000487266 SAMSN1Q9NSI8 373 aaKnown RBP16.61■□□□□ 0.25
GABPA-203ENST00000487266 NCDNQ9UBB6 729 aa16.61■□□□□ 0.25
GABPA-203ENST00000487266 APEX2Q9UBZ4 518 aa16.61■□□□□ 0.25
GABPA-203ENST00000487266 SFMBT1Q9UHJ3 866 aa16.61■□□□□ 0.25
GABPA-203ENST00000487266 SDK1Q7Z5N4 2213 aa16.61■□□□□ 0.25
GABPA-203ENST00000487266 ZNF292O60281 2723 aa16.61■□□□□ 0.25
GABPA-203ENST00000487266 LETM1O95202 739 aaPredicted RBP16.6■□□□□ 0.25
GABPA-203ENST00000487266 PRKCSHP14314 528 aaPredicted RBP16.6■□□□□ 0.25
GABPA-203ENST00000487266 TYRP14679 529 aa16.6■□□□□ 0.25
GABPA-203ENST00000487266 ERCC5P28715 1186 aaPredicted RBP16.6■□□□□ 0.25
GABPA-203ENST00000487266 USP8P40818 1118 aa16.6■□□□□ 0.25
GABPA-203ENST00000487266 SIM2Q14190 667 aaPredicted RBP16.6■□□□□ 0.25
GABPA-203ENST00000487266 EXOC3L4Q17RC7 722 aa16.6■□□□□ 0.25
GABPA-203ENST00000487266 BSPRYQ5W0U4 402 aa16.6■□□□□ 0.25
GABPA-203ENST00000487266 TOGARAM2Q6ZUX3 1019 aa16.6■□□□□ 0.25
GABPA-203ENST00000487266 DENND1CQ8IV53 801 aa16.6■□□□□ 0.25
GABPA-203ENST00000487266 FMNL3Q8IVF7 1028 aa16.6■□□□□ 0.25
GABPA-203ENST00000487266 TXNDC5Q8NBS9 432 aaKnown RBP16.6■□□□□ 0.25
GABPA-203ENST00000487266 CDK5RAP1Q96SZ6 601 aaKnown RBP16.6■□□□□ 0.25
GABPA-203ENST00000487266 MIS12Q9H081 205 aa16.6■□□□□ 0.25
GABPA-203ENST00000487266 CNGB3Q9NQW8 809 aa16.6■□□□□ 0.25
GABPA-203ENST00000487266 DNAJC17Q9NVM6 304 aaKnown RBP16.6■□□□□ 0.25
GABPA-203ENST00000487266 DACH1Q9UI36 760 aa16.6■□□□□ 0.25
GABPA-203ENST00000487266 CYTH4Q9UIA0 394 aa16.6■□□□□ 0.25
GABPA-203ENST00000487266 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.59■□□□□ 0.25
GABPA-203ENST00000487266 KCNJ18B7U540 433 aa16.59■□□□□ 0.25
GABPA-203ENST00000487266 SGK1O00141 431 aa16.59■□□□□ 0.25
GABPA-203ENST00000487266 THAP12O43422 761 aa16.59■□□□□ 0.25
GABPA-203ENST00000487266 KLF8O95600 359 aaPredicted RBP16.59■□□□□ 0.25
GABPA-203ENST00000487266 GNA15P30679 374 aa16.59■□□□□ 0.25
GABPA-203ENST00000487266 HOXA6P31267 233 aa16.59■□□□□ 0.25
GABPA-203ENST00000487266 GRIA2P42262 883 aa16.59■□□□□ 0.25
GABPA-203ENST00000487266 KIR2DL1P43626 348 aaPredicted RBP16.59■□□□□ 0.25
GABPA-203ENST00000487266 KCNJ12Q14500 433 aa16.59■□□□□ 0.25
GABPA-203ENST00000487266 STILQ15468 1287 aa16.59■□□□□ 0.25
GABPA-203ENST00000487266 C10orf76Q5T2E6 689 aa16.59■□□□□ 0.25
GABPA-203ENST00000487266 TMEM92Q6UXU6 159 aa16.59■□□□□ 0.25
GABPA-203ENST00000487266 TERB1Q8NA31 727 aa16.59■□□□□ 0.25
GABPA-203ENST00000487266 IL17RCQ8NAC3 791 aa16.59■□□□□ 0.25
GABPA-203ENST00000487266 TUBGCP2Q9BSJ2 902 aa16.59■□□□□ 0.25
GABPA-203ENST00000487266 TPSD1Q9BZJ3 242 aa16.59■□□□□ 0.25
GABPA-203ENST00000487266 MARK1Q9P0L2 795 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms