RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 CUL7Q14999 1698 aa4.47□□□□□ -1.69
CMSS1-204ENST00000479555 SPAG9O60271 1321 aaKnown RBP4.46□□□□□ -1.69
CMSS1-204ENST00000479555 PHLPP2Q6ZVD8 1323 aa4.46□□□□□ -1.69
CMSS1-204ENST00000479555 NUP160Q12769 1436 aa4.46□□□□□ -1.69
CMSS1-204ENST00000479555 ARHGEF11O15085 1522 aa4.46□□□□□ -1.69
CMSS1-204ENST00000479555 UGGT2Q9NYU1 1516 aa4.46□□□□□ -1.69
CMSS1-204ENST00000479555 CEP170Q5SW79 1584 aa4.46□□□□□ -1.7
CMSS1-204ENST00000479555 MYOM2P54296 1465 aa4.46□□□□□ -1.7
CMSS1-204ENST00000479555 MAGI1Q96QZ7 1491 aaPredicted RBP4.46□□□□□ -1.7
CMSS1-204ENST00000479555 MAP3K5Q99683 1374 aa4.46□□□□□ -1.7
CMSS1-204ENST00000479555 GOLGA6L7A0A1B0GV03 622 aa4.46□□□□□ -1.7
CMSS1-204ENST00000479555 SMIM35A0A1B0GVV1 85 aa4.46□□□□□ -1.7
CMSS1-204ENST00000479555 PLEKHD1A6NEE1 506 aa4.46□□□□□ -1.7
CMSS1-204ENST00000479555 PRSS29PA6NIE9 313 aa4.46□□□□□ -1.7
CMSS1-204ENST00000479555 HMGB1P1B2RPK0 211 aaPredicted RBP4.46□□□□□ -1.7
CMSS1-204ENST00000479555 EIF3CLB5ME19 914 aaKnown RBP4.46□□□□□ -1.7
CMSS1-204ENST00000479555 H0YIZ8 118 aa4.46□□□□□ -1.7
CMSS1-204ENST00000479555 H3BUI4 141 aa4.46□□□□□ -1.7
CMSS1-204ENST00000479555 PPEF2O14830 753 aa4.46□□□□□ -1.7
CMSS1-204ENST00000479555 TRIAP1O43715 76 aa4.46□□□□□ -1.7
CMSS1-204ENST00000479555 ZBED1O96006 694 aa4.46□□□□□ -1.7
CMSS1-204ENST00000479555 HRGP04196 525 aa4.46□□□□□ -1.7
CMSS1-204ENST00000479555 ALDH2P05091 517 aa4.46□□□□□ -1.7
CMSS1-204ENST00000479555 EZRP15311 586 aaKnown RBP4.46□□□□□ -1.7
CMSS1-204ENST00000479555 CASTP20810 708 aaKnown RBP4.46□□□□□ -1.7
CMSS1-204ENST00000479555 MALP21145 153 aa4.46□□□□□ -1.7
CMSS1-204ENST00000479555 LIPAP38571 399 aa4.46□□□□□ -1.7
CMSS1-204ENST00000479555 MAGEA8P43361 318 aa4.46□□□□□ -1.7
CMSS1-204ENST00000479555 TOB1P50616 345 aaPredicted RBP4.46□□□□□ -1.7
CMSS1-204ENST00000479555 FXR1P51114 621 aaKnown RBP eCLIP4.46□□□□□ -1.7
CMSS1-204ENST00000479555 MRPL12P52815 198 aaKnown RBP4.46□□□□□ -1.7
CMSS1-204ENST00000479555 NUCB1Q02818 461 aa4.46□□□□□ -1.7
CMSS1-204ENST00000479555 BIRC2Q13490 618 aa4.46□□□□□ -1.7
CMSS1-204ENST00000479555 BMPR2Q13873 1038 aa4.46□□□□□ -1.7
CMSS1-204ENST00000479555 FGL2Q14314 439 aa4.46□□□□□ -1.7
CMSS1-204ENST00000479555 GRM3Q14832 879 aa4.46□□□□□ -1.7
CMSS1-204ENST00000479555 CDC37Q16543 378 aaPredicted RBP4.46□□□□□ -1.7
CMSS1-204ENST00000479555 MAP9Q49MG5 647 aa4.46□□□□□ -1.7
CMSS1-204ENST00000479555 CEP85Q6P2H3 762 aa4.46□□□□□ -1.7
CMSS1-204ENST00000479555 FBXO38Q6PIJ6 1188 aa4.46□□□□□ -1.7
CMSS1-204ENST00000479555 CRELD2Q6UXH1 353 aaPredicted RBP4.46□□□□□ -1.7
CMSS1-204ENST00000479555 KSR2Q6VAB6 950 aa4.46□□□□□ -1.7
CMSS1-204ENST00000479555 NAPRTQ6XQN6 538 aa4.46□□□□□ -1.7
CMSS1-204ENST00000479555 B4GALNT4Q76KP1 1039 aa4.46□□□□□ -1.7
CMSS1-204ENST00000479555 MAVSQ7Z434 540 aa4.46□□□□□ -1.7
CMSS1-204ENST00000479555 HEATR3Q7Z4Q2 680 aa4.46□□□□□ -1.7
CMSS1-204ENST00000479555 C11orf96Q7Z7L8 435 aa4.46□□□□□ -1.7
CMSS1-204ENST00000479555 CNGA4Q8IV77 575 aa4.46□□□□□ -1.7
CMSS1-204ENST00000479555 FAM71BQ8TC56 605 aa4.46□□□□□ -1.7
CMSS1-204ENST00000479555 GPT2Q8TD30 523 aa4.46□□□□□ -1.7
CMSS1-204ENST00000479555 MAGEC3Q8TD91 643 aa4.46□□□□□ -1.7
CMSS1-204ENST00000479555 FAM136AQ96C01 138 aa4.46□□□□□ -1.7
CMSS1-204ENST00000479555 RSRC1Q96IZ7 334 aaKnown RBP4.46□□□□□ -1.7
CMSS1-204ENST00000479555 CABS1Q96KC9 395 aa4.46□□□□□ -1.7
CMSS1-204ENST00000479555 RMDN2Q96LZ7 410 aa4.46□□□□□ -1.7
CMSS1-204ENST00000479555 EIF3CQ99613 913 aaKnown RBP4.46□□□□□ -1.7
CMSS1-204ENST00000479555 SEMA4CQ9C0C4 833 aa4.46□□□□□ -1.7
CMSS1-204ENST00000479555 UBA5Q9GZZ9 404 aa4.46□□□□□ -1.7
CMSS1-204ENST00000479555 TTC12Q9H892 705 aaPredicted RBP4.46□□□□□ -1.7
CMSS1-204ENST00000479555 CHCHD3Q9NX63 227 aaKnown RBP4.46□□□□□ -1.7
CMSS1-204ENST00000479555 SIDT1Q9NXL6 827 aaKnown RBP4.46□□□□□ -1.7
CMSS1-204ENST00000479555 GABBR1Q9UBS5 961 aa4.46□□□□□ -1.7
CMSS1-204ENST00000479555 PCDHA3Q9Y5H8 950 aa4.46□□□□□ -1.7
CMSS1-204ENST00000479555 BCORL1Q5H9F3 1711 aa4.46□□□□□ -1.7
CMSS1-204ENST00000479555 FAM135AQ9P2D6 1515 aa4.46□□□□□ -1.7
CMSS1-204ENST00000479555 TTC41PQ6P2S7 1318 aa4.46□□□□□ -1.7
CMSS1-204ENST00000479555 CFAP74Q9C0B2 1584 aa4.45□□□□□ -1.7
CMSS1-204ENST00000479555 SYNJ2O15056 1496 aa4.45□□□□□ -1.7
CMSS1-204ENST00000479555 ATP10AO60312 1499 aa4.45□□□□□ -1.7
CMSS1-204ENST00000479555 KDRP35968 1356 aa4.45□□□□□ -1.7
CMSS1-204ENST00000479555 CARMIL1Q5VZK9 1371 aa4.45□□□□□ -1.7
CMSS1-204ENST00000479555 CCDC194A0A1B0GVG4 234 aa4.45□□□□□ -1.7
CMSS1-204ENST00000479555 CCDC189A1A4V9 331 aa4.45□□□□□ -1.7
CMSS1-204ENST00000479555 CAPN8A6NHC0 703 aa4.45□□□□□ -1.7
CMSS1-204ENST00000479555 PRRT4C9JH25 899 aa4.45□□□□□ -1.7
CMSS1-204ENST00000479555 GOLGA6L19H0YKK7 550 aa4.45□□□□□ -1.7
CMSS1-204ENST00000479555 EBAG9O00559 213 aa4.45□□□□□ -1.7
CMSS1-204ENST00000479555 COQ9O75208 318 aa4.45□□□□□ -1.7
CMSS1-204ENST00000479555 JTBO76095 146 aa4.45□□□□□ -1.7
CMSS1-204ENST00000479555 KIAA0754O94854 1291 aa4.45□□□□□ -1.7
CMSS1-204ENST00000479555 GJB1P08034 283 aa4.45□□□□□ -1.7
CMSS1-204ENST00000479555 GNAI3P08754 354 aa4.45□□□□□ -1.7
CMSS1-204ENST00000479555 FAM163BP0C2L3 166 aa4.45□□□□□ -1.7
CMSS1-204ENST00000479555 PHKG2P15735 406 aa4.45□□□□□ -1.7
CMSS1-204ENST00000479555 CERS1P27544 350 aa4.45□□□□□ -1.7
CMSS1-204ENST00000479555 CD6P30203 668 aa4.45□□□□□ -1.7
CMSS1-204ENST00000479555 ELF1P32519 619 aa4.45□□□□□ -1.7
CMSS1-204ENST00000479555 LMAN1P49257 510 aa4.45□□□□□ -1.7
CMSS1-204ENST00000479555 GNAI1P63096 354 aa4.45□□□□□ -1.7
CMSS1-204ENST00000479555 DRP2Q13474 957 aa4.45□□□□□ -1.7
CMSS1-204ENST00000479555 SNAPC2Q13487 334 aa4.45□□□□□ -1.7
CMSS1-204ENST00000479555 BOP1Q14137 746 aaKnown RBP4.45□□□□□ -1.7
CMSS1-204ENST00000479555 DCTN1Q14203 1278 aa4.45□□□□□ -1.7
CMSS1-204ENST00000479555 SMC1AQ14683 1233 aaKnown RBP4.45□□□□□ -1.7
CMSS1-204ENST00000479555 KLHL22Q53GT1 634 aa4.45□□□□□ -1.7
CMSS1-204ENST00000479555 PLAC9Q5JTB6 97 aa4.45□□□□□ -1.7
CMSS1-204ENST00000479555 DARS2Q6PI48 645 aaKnown RBP4.45□□□□□ -1.7
CMSS1-204ENST00000479555 TMED8Q6PL24 325 aaPredicted RBP4.45□□□□□ -1.7
CMSS1-204ENST00000479555 NPNTQ6UXI9 565 aa4.45□□□□□ -1.7
CMSS1-204ENST00000479555 CCDC149Q6ZUS6 474 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms