RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 RASAL2Q9UJF2 1139 aa8.69□□□□□ -1.02
HDAC6-221ENST00000477561 DNMT3LQ9UJW3 386 aa8.69□□□□□ -1.02
HDAC6-221ENST00000477561 HELZP42694 1942 aaKnown RBP8.69□□□□□ -1.02
HDAC6-221ENST00000477561 MYO16Q9Y6X6 1858 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 YJEFN3A6XGL0 299 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 GOLGA6L6A8MZA4 724 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 E7ENQ6 273 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 K7ESF4 209 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 PES1O00541 588 aaKnown RBP8.68□□□□□ -1.02
HDAC6-221ENST00000477561 TRIM24O15164 1050 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 GREM1O60565 184 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 GABBR2O75899 941 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 ADH1CP00326 375 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 LMNAP02545 664 aaKnown RBP8.68□□□□□ -1.02
HDAC6-221ENST00000477561 SETSIPP0DME0 302 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 ADH5P11766 374 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 PRKCSHP14314 528 aaPredicted RBP8.68□□□□□ -1.02
HDAC6-221ENST00000477561 PON1P27169 355 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 CDC25BP30305 580 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 PLA2G4AP47712 749 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 PSEN1P49768 467 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 ZNF75DP51815 510 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 ZNF132P52740 706 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 KDSRQ06136 332 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 GOLGA8FQ08AF8 430 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 GOLGA8DPQ0D2H9 430 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 SRSF5Q13243 272 aaKnown RBP8.68□□□□□ -1.02
HDAC6-221ENST00000477561 CNGA2Q16280 664 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 LPAL2Q16609 132 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 MAN2A1Q16706 1144 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 EXOC3L4Q17RC7 722 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 VWA3BQ502W6 1294 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 PKDCCQ504Y2 493 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 C2orf27AQ580R0 203 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 BTBD8Q5XKL5 378 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 PMF1Q6P1K2 205 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 TRIM65Q6PJ69 517 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 MAMSTRQ6ZN01 415 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 TPGS1Q6ZTW0 290 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 HTR3DQ70Z44 454 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 RSRC2Q7L4I2 434 aaKnown RBP8.68□□□□□ -1.02
HDAC6-221ENST00000477561 BHLHA9Q7RTU4 235 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 SIX6OS1Q8N1H7 587 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 ZBTB44Q8NCP5 570 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 SLC35F5Q8WV83 523 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 EDEM1Q92611 657 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 NELL1Q92832 810 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 BHMTQ93088 406 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 EXOC4Q96A65 974 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 MRFAP1L1Q96HT8 127 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 PDLIM2Q96JY6 352 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 PNKPQ96T60 521 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 IER2Q9BTL4 223 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 ZDHHC4Q9NPG8 344 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 SPHK2Q9NRA0 654 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 CLIC5Q9NZA1 410 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 LSM7Q9UK45 103 aaKnown RBP8.68□□□□□ -1.02
HDAC6-221ENST00000477561 AJAP1Q9UKB5 411 aaPredicted RBP8.68□□□□□ -1.02
HDAC6-221ENST00000477561 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.68□□□□□ -1.02
HDAC6-221ENST00000477561 PCDHGA2Q9Y5H1 932 aa8.68□□□□□ -1.02
HDAC6-221ENST00000477561 SLC12A8A0AV02 714 aa8.67□□□□□ -1.02
HDAC6-221ENST00000477561 KCNJ18B7U540 433 aa8.67□□□□□ -1.02
HDAC6-221ENST00000477561 NEDD8-MDP1E9PL57 170 aa8.67□□□□□ -1.02
HDAC6-221ENST00000477561 K7EQS6 105 aa8.67□□□□□ -1.02
HDAC6-221ENST00000477561 THAP12O43422 761 aa8.67□□□□□ -1.02
HDAC6-221ENST00000477561 ATG13O75143 517 aa8.67□□□□□ -1.02
HDAC6-221ENST00000477561 STC2O76061 302 aa8.67□□□□□ -1.02
HDAC6-221ENST00000477561 KLKB1P03952 638 aa8.67□□□□□ -1.02
HDAC6-221ENST00000477561 PTMAP06454 111 aaKnown RBP8.67□□□□□ -1.02
HDAC6-221ENST00000477561 TPM2P07951 284 aa8.67□□□□□ -1.02
HDAC6-221ENST00000477561 ZNF18P17022 549 aa8.67□□□□□ -1.02
HDAC6-221ENST00000477561 EEF1GP26641 437 aaKnown RBP8.67□□□□□ -1.02
HDAC6-221ENST00000477561 NRLP54845 237 aa8.67□□□□□ -1.02
HDAC6-221ENST00000477561 MFAP3P55082 362 aa8.67□□□□□ -1.02
HDAC6-221ENST00000477561 DAOAP59103 153 aa8.67□□□□□ -1.02
HDAC6-221ENST00000477561 FANCCQ00597 558 aa8.67□□□□□ -1.02
HDAC6-221ENST00000477561 GAD2Q05329 585 aa8.67□□□□□ -1.02
HDAC6-221ENST00000477561 KCNJ12Q14500 433 aa8.67□□□□□ -1.02
HDAC6-221ENST00000477561 FILIP1LQ4L180 1135 aa8.67□□□□□ -1.02
HDAC6-221ENST00000477561 EMC10Q5UCC4 262 aa8.67□□□□□ -1.02
HDAC6-221ENST00000477561 BSPRYQ5W0U4 402 aa8.67□□□□□ -1.02
HDAC6-221ENST00000477561 PM20D1Q6GTS8 502 aa8.67□□□□□ -1.02
HDAC6-221ENST00000477561 DENND1BQ6P3S1 775 aa8.67□□□□□ -1.02
HDAC6-221ENST00000477561 KLHDC10Q6PID8 442 aa8.67□□□□□ -1.02
HDAC6-221ENST00000477561 TADA2BQ86TJ2 420 aa8.67□□□□□ -1.02
HDAC6-221ENST00000477561 ARHGAP18Q8N392 663 aa8.67□□□□□ -1.02
HDAC6-221ENST00000477561 DCLK2Q8N568 766 aa8.67□□□□□ -1.02
HDAC6-221ENST00000477561 CCDC33Q8N5R6 958 aa8.67□□□□□ -1.02
HDAC6-221ENST00000477561 KIAA1958Q8N8K9 716 aa8.67□□□□□ -1.02
HDAC6-221ENST00000477561 SUMF1Q8NBK3 374 aa8.67□□□□□ -1.02
HDAC6-221ENST00000477561 CLEC4CQ8WTT0 213 aa8.67□□□□□ -1.02
HDAC6-221ENST00000477561 KCTD13Q8WZ19 329 aa8.67□□□□□ -1.02
HDAC6-221ENST00000477561 OTUB2Q96DC9 234 aa8.67□□□□□ -1.02
HDAC6-221ENST00000477561 TRIM44Q96DX7 344 aaPredicted RBP8.67□□□□□ -1.02
HDAC6-221ENST00000477561 HHIPQ96QV1 700 aa8.67□□□□□ -1.02
HDAC6-221ENST00000477561 CDK5RAP1Q96SZ6 601 aaKnown RBP8.67□□□□□ -1.02
HDAC6-221ENST00000477561 HINFPQ9BQA5 517 aa8.67□□□□□ -1.02
HDAC6-221ENST00000477561 TUBGCP2Q9BSJ2 902 aa8.67□□□□□ -1.02
HDAC6-221ENST00000477561 MIS12Q9H081 205 aa8.67□□□□□ -1.02
HDAC6-221ENST00000477561 NDST4Q9H3R1 872 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms