RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Gm13103Q4VAD2 491 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Hsph1Q61699 858 aaKnown RBP6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Phf21aQ6ZPK0 659 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Fastkd5Q7TMV3 762 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Zscan4cQ80VJ6 506 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Mfn1Q811U4 741 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Lrrc4cQ8C031 640 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Tlk1Q8C0V0 766 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Cypt1Q8CH20 168 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Tex19.1Q99MV2 351 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Ndc80Q9D0F1 642 aaKnown RBP6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Trpc2Q9R244 1172 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Gys1Q9Z1E4 738 aaKnown RBP6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Krt27Q9Z320 448 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Ankfn1A0A140LIW7 1083 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Olfr1305A2AVW3 312 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Olfr456B2RT27 312 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Ccdc6D3YZP9 469 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Vmn2r72D3Z4N8 856 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 March10E9PX79 788 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Gm3460E9QAI8 215 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Vmn2r15L7N2A0 855 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Dnase1l3O55070 310 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 P01734 135 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Rasgrf1P27671 1262 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Mxi1P50540 228 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Hsd17b2P51658 381 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Oaz1P54369 227 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Slc12a1P55014 1095 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 GuloP58710 440 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Fam83hQ148V8 1209 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Q3TQQ9 903 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Tmem63bQ3TWI9 832 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Lipo3Q3UT41 399 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Ddx5Q61656 614 aaKnown RBP6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Trim24Q64127 1051 aaKnown RBP6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Cyp2c29Q64458 490 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Mtmr10Q7TPM9 771 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Olfr299Q7TS05 330 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Znf618Q80YY7 953 aaKnown RBP6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Q8BGA7 448 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Gpr20Q8BYC4 358 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Bcas3Q8CCN5 928 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Fate1Q8CEK7 99 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Nedd4lQ8CFI0 1004 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Mamdc2Q8CG85 686 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Olfr458Q8VF80 313 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Olfr457Q8VGP5 313 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Pcdh18Q8VHR0 1134 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Pcdhb6Q91XZ4 772 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Mov10l1Q99MV5 1187 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Zmat2Q9CPW7 199 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Mrpl2Q9D773 306 aaKnown RBP6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 TcimQ9D915 106 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Plscr2Q9DCW2 307 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Spag6Q9JLI7 507 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 AuhQ9JLZ3 314 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Clec4aQ9QZ15 238 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Trpc3Q9QZC1 836 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Mpp2Q9WV34 552 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Wdr81Q5ND34 1934 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Lonrf2B2RT44 518 aa6.48□□□□□ -1.37
Lig4-202ENSMUST00000170033 TroapB7ZNG4 668 aa6.48□□□□□ -1.37
Lig4-202ENSMUST00000170033 Gm28043E0CXC2 719 aa6.48□□□□□ -1.37
Lig4-202ENSMUST00000170033 ThbdP15306 577 aa6.48□□□□□ -1.37
Lig4-202ENSMUST00000170033 Lta4hP24527 611 aa6.48□□□□□ -1.37
Lig4-202ENSMUST00000170033 Pou2f1P25425 770 aa6.48□□□□□ -1.37
Lig4-202ENSMUST00000170033 Tnni3P48787 211 aa6.48□□□□□ -1.37
Lig4-202ENSMUST00000170033 Aff3P51827 1254 aa6.48□□□□□ -1.37
Lig4-202ENSMUST00000170033 Aars2Q14CH7 980 aa6.48□□□□□ -1.37
Lig4-202ENSMUST00000170033 Mcm9Q2KHI9 1134 aa6.48□□□□□ -1.37
Lig4-202ENSMUST00000170033 Mphosph8Q3TYA6 858 aaKnown RBP6.48□□□□□ -1.37
Lig4-202ENSMUST00000170033 Hace1Q3U0D9 909 aa6.48□□□□□ -1.37
Lig4-202ENSMUST00000170033 Trappc3lQ4KL14 181 aa6.48□□□□□ -1.37
Lig4-202ENSMUST00000170033 Slc9b2Q5BKR2 547 aa6.48□□□□□ -1.37
Lig4-202ENSMUST00000170033 CcnjlQ5SRT8 387 aa6.48□□□□□ -1.37
Lig4-202ENSMUST00000170033 Ripor1Q68FE6 1223 aa6.48□□□□□ -1.37
Lig4-202ENSMUST00000170033 DstykQ6XUX1 927 aa6.48□□□□□ -1.37
Lig4-202ENSMUST00000170033 RbakQ8BQC8 711 aa6.48□□□□□ -1.37
Lig4-202ENSMUST00000170033 BoraQ8BS90 525 aa6.48□□□□□ -1.37
Lig4-202ENSMUST00000170033 Bri3bpQ8BXV2 253 aa6.48□□□□□ -1.37
Lig4-202ENSMUST00000170033 Pdik1lQ8QZR7 341 aa6.48□□□□□ -1.37
Lig4-202ENSMUST00000170033 Lrrc8cQ8R502 803 aa6.48□□□□□ -1.37
Lig4-202ENSMUST00000170033 Rnf8Q8VC56 488 aa6.48□□□□□ -1.37
Lig4-202ENSMUST00000170033 Stx18Q8VDS8 334 aa6.48□□□□□ -1.37
Lig4-202ENSMUST00000170033 Sec63Q8VHE0 760 aaKnown RBP6.48□□□□□ -1.37
Lig4-202ENSMUST00000170033 Epn3Q91W69 636 aa6.48□□□□□ -1.37
Lig4-202ENSMUST00000170033 Trps1Q925H1 1281 aa6.48□□□□□ -1.37
Lig4-202ENSMUST00000170033 Klhl35Q9CZ49 574 aa6.48□□□□□ -1.37
Lig4-202ENSMUST00000170033 Tmem86aQ9D8N3 241 aa6.48□□□□□ -1.37
Lig4-202ENSMUST00000170033 Q9DA42 136 aa6.48□□□□□ -1.37
Lig4-202ENSMUST00000170033 1700013H16RikQ9DAC5 291 aa6.48□□□□□ -1.37
Lig4-202ENSMUST00000170033 Fundc1Q9DB70 155 aa6.48□□□□□ -1.37
Lig4-202ENSMUST00000170033 Mrpl4Q9DCU6 294 aaKnown RBP6.48□□□□□ -1.37
Lig4-202ENSMUST00000170033 Vwa7Q9JHA8 891 aa6.48□□□□□ -1.37
Lig4-202ENSMUST00000170033 St6galnac4Q9R2B6 360 aa6.48□□□□□ -1.37
Lig4-202ENSMUST00000170033 Lactbl1S4R213 581 aa6.48□□□□□ -1.37
Lig4-202ENSMUST00000170033 Cpb1B2RS76 415 aa6.48□□□□□ -1.37
Lig4-202ENSMUST00000170033 Olfr310B2RVZ1 332 aa6.48□□□□□ -1.37
Lig4-202ENSMUST00000170033 Siah3B2RWG3 268 aa6.48□□□□□ -1.37
Retrieved 100 of 22,080 RNA–protein pairs in 66.2 ms