Protein–RNA interactions for Protein: O55070

Dnase1l3, Deoxyribonuclease gamma, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnase1l3O55070 Gm25239-201ENSMUST00000174915 86 ntBASIC37.9■■■■□ 3.66
Dnase1l3O55070 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.19■■■■□ 3.22
Dnase1l3O55070 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
Dnase1l3O55070 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
Dnase1l3O55070 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.52■■■□□ 2.96
Dnase1l3O55070 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
Dnase1l3O55070 Gm24109-201ENSMUST00000175489 103 ntBASIC32.99■■■□□ 2.87
Dnase1l3O55070 Gm15042-201ENSMUST00000120212 883 ntBASIC32.84■■■□□ 2.85
Dnase1l3O55070 Psd-208ENSMUST00000224556 2034 ntBASIC32.6■■■□□ 2.81
Dnase1l3O55070 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Dnase1l3O55070 Gm15045-201ENSMUST00000117359 883 ntBASIC32.02■■■□□ 2.72
Dnase1l3O55070 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.01■■■□□ 2.71
Dnase1l3O55070 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
Dnase1l3O55070 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32■■■□□ 2.71
Dnase1l3O55070 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Dnase1l3O55070 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Dnase1l3O55070 Gm23366-201ENSMUST00000175022 89 ntBASIC31.63■■■□□ 2.65
Dnase1l3O55070 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
Dnase1l3O55070 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Dnase1l3O55070 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Dnase1l3O55070 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Dnase1l3O55070 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Dnase1l3O55070 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Dnase1l3O55070 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.88■■■□□ 2.53
Dnase1l3O55070 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.77■■■□□ 2.52
Dnase1l3O55070 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Dnase1l3O55070 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Dnase1l3O55070 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.61■■■□□ 2.49
Dnase1l3O55070 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.59■■■□□ 2.49
Dnase1l3O55070 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
Dnase1l3O55070 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Dnase1l3O55070 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
Dnase1l3O55070 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Dnase1l3O55070 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.38■■■□□ 2.45
Dnase1l3O55070 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Dnase1l3O55070 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
Dnase1l3O55070 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Dnase1l3O55070 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.12■■■□□ 2.41
Dnase1l3O55070 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.07■■■□□ 2.4
Dnase1l3O55070 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Dnase1l3O55070 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Dnase1l3O55070 Gm25238-201ENSMUST00000174914 89 ntBASIC29.99■■■□□ 2.39
Dnase1l3O55070 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Dnase1l3O55070 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Dnase1l3O55070 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.91■■■□□ 2.38
Dnase1l3O55070 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.88■■■□□ 2.37
Dnase1l3O55070 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.82■■■□□ 2.36
Dnase1l3O55070 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Dnase1l3O55070 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.73■■■□□ 2.35
Dnase1l3O55070 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.7■■■□□ 2.34
Dnase1l3O55070 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.69■■■□□ 2.34
Dnase1l3O55070 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
Dnase1l3O55070 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Dnase1l3O55070 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.42■■■□□ 2.3
Dnase1l3O55070 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.4■■■□□ 2.3
Dnase1l3O55070 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Dnase1l3O55070 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Dnase1l3O55070 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
Dnase1l3O55070 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29.23■■■□□ 2.27
Dnase1l3O55070 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
Dnase1l3O55070 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
Dnase1l3O55070 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.18■■■□□ 2.26
Dnase1l3O55070 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.13■■■□□ 2.25
Dnase1l3O55070 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.12■■■□□ 2.25
Dnase1l3O55070 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.08■■■□□ 2.25
Dnase1l3O55070 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Dnase1l3O55070 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.03■■■□□ 2.24
Dnase1l3O55070 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Dnase1l3O55070 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.98■■■□□ 2.23
Dnase1l3O55070 Gm25262-201ENSMUST00000174934 133 ntBASIC28.93■■■□□ 2.22
Dnase1l3O55070 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Dnase1l3O55070 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Dnase1l3O55070 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Dnase1l3O55070 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
Dnase1l3O55070 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.78■■■□□ 2.2
Dnase1l3O55070 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
Dnase1l3O55070 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Dnase1l3O55070 Gm27325-201ENSMUST00000175467 74 ntBASIC28.7■■■□□ 2.18
Dnase1l3O55070 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Dnase1l3O55070 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Dnase1l3O55070 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC28.59■■■□□ 2.17
Dnase1l3O55070 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.52■■■□□ 2.16
Dnase1l3O55070 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Dnase1l3O55070 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.49■■■□□ 2.15
Dnase1l3O55070 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.49■■■□□ 2.15
Dnase1l3O55070 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.15
Dnase1l3O55070 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Dnase1l3O55070 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.43■■■□□ 2.14
Dnase1l3O55070 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Dnase1l3O55070 Rab21-202ENSMUST00000218831 843 ntBASIC28.4■■■□□ 2.14
Dnase1l3O55070 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.37■■■□□ 2.13
Dnase1l3O55070 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Dnase1l3O55070 Gm26115-201ENSMUST00000175605 87 ntBASIC28.34■■■□□ 2.13
Dnase1l3O55070 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
Dnase1l3O55070 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Dnase1l3O55070 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Dnase1l3O55070 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC28.25■■■□□ 2.11
Dnase1l3O55070 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Dnase1l3O55070 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Dnase1l3O55070 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28.22■■■□□ 2.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms