RNA–Protein interactions for RNA: ENSMUST00000113388.2

Chm-202, Transcript of Rab proteins geranylgeranyltransferase component A 1, mousemouse

TSL 1 (best) BASIC

Gene Chm, Length 4,749 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chm-202ENSMUST00000113388 UncxO08934 530 aa7.4□□□□□ -1.22
Chm-202ENSMUST00000113388 Mmp10O55123 476 aa7.4□□□□□ -1.22
Chm-202ENSMUST00000113388 Nmt2O70311 529 aa7.4□□□□□ -1.22
Chm-202ENSMUST00000113388 Abcb4P21440 1276 aa7.4□□□□□ -1.22
Chm-202ENSMUST00000113388 Gdf3Q07104 366 aa7.4□□□□□ -1.22
Chm-202ENSMUST00000113388 Tigd2Q0VBL1 525 aa7.4□□□□□ -1.22
Chm-202ENSMUST00000113388 Krt26Q3TRJ4 462 aa7.4□□□□□ -1.22
Chm-202ENSMUST00000113388 Q3TYL0 343 aa7.4□□□□□ -1.22
Chm-202ENSMUST00000113388 MaelQ8BVN9 434 aa7.4□□□□□ -1.22
Chm-202ENSMUST00000113388 Dennd2dQ91VV4 469 aa7.4□□□□□ -1.22
Chm-202ENSMUST00000113388 Gpr108Q91WD0 569 aa7.4□□□□□ -1.22
Chm-202ENSMUST00000113388 Rsph14Q9D3W1 341 aa7.4□□□□□ -1.22
Chm-202ENSMUST00000113388 Cyp4f14Q9EP75 524 aa7.4□□□□□ -1.22
Chm-202ENSMUST00000113388 Hsd3b7Q9EQC1 369 aa7.4□□□□□ -1.22
Chm-202ENSMUST00000113388 Phrf1A6H619 1682 aa7.4□□□□□ -1.23
Chm-202ENSMUST00000113388 Frmd7A2AD83 703 aa7.4□□□□□ -1.23
Chm-202ENSMUST00000113388 Itpripl1A2ASA8 547 aa7.4□□□□□ -1.23
Chm-202ENSMUST00000113388 Erich1E9PY43 332 aa7.4□□□□□ -1.23
Chm-202ENSMUST00000113388 Gm20425E9Q035 978 aaKnown RBP7.4□□□□□ -1.23
Chm-202ENSMUST00000113388 Tp63O88898 680 aa7.4□□□□□ -1.23
Chm-202ENSMUST00000113388 Dnajb5O89114 348 aa7.4□□□□□ -1.23
Chm-202ENSMUST00000113388 ProcP33587 460 aa7.4□□□□□ -1.23
Chm-202ENSMUST00000113388 Slc1a2P43006 572 aa7.4□□□□□ -1.23
Chm-202ENSMUST00000113388 Gpc4P51655 557 aa7.4□□□□□ -1.23
Chm-202ENSMUST00000113388 Padi2Q08642 673 aa7.4□□□□□ -1.23
Chm-202ENSMUST00000113388 Znf667Q2TL60 609 aa7.4□□□□□ -1.23
Chm-202ENSMUST00000113388 Prmt9Q3U3W5 846 aa7.4□□□□□ -1.23
Chm-202ENSMUST00000113388 Pitpnm3Q3UHE1 974 aa7.4□□□□□ -1.23
Chm-202ENSMUST00000113388 Sec31aQ3UPL0 1230 aaKnown RBP7.4□□□□□ -1.23
Chm-202ENSMUST00000113388 Tcf12Q61286 706 aa7.4□□□□□ -1.23
Chm-202ENSMUST00000113388 Carns1Q6ZPS2 827 aa7.4□□□□□ -1.23
Chm-202ENSMUST00000113388 Tmed3Q78IS1 221 aa7.4□□□□□ -1.23
Chm-202ENSMUST00000113388 Ttll4Q80UG8 1193 aa7.4□□□□□ -1.23
Chm-202ENSMUST00000113388 Fbxo28Q8BIG4 368 aa7.4□□□□□ -1.23
Chm-202ENSMUST00000113388 Pih1h3bQ8C6P5 218 aa7.4□□□□□ -1.23
Chm-202ENSMUST00000113388 Myef2Q8C854 591 aaKnown RBP7.4□□□□□ -1.23
Chm-202ENSMUST00000113388 Pop1Q8K205 1045 aa7.4□□□□□ -1.23
Chm-202ENSMUST00000113388 Spag16Q8K450 639 aa7.4□□□□□ -1.23
Chm-202ENSMUST00000113388 Dlgap5Q8K4R9 808 aa7.4□□□□□ -1.23
Chm-202ENSMUST00000113388 MyocdQ8VIM5 935 aa7.4□□□□□ -1.23
Chm-202ENSMUST00000113388 Pcdhgc3Q91XX1 934 aa7.4□□□□□ -1.23
Chm-202ENSMUST00000113388 Ndufv1Q91YT0 464 aa7.4□□□□□ -1.23
Chm-202ENSMUST00000113388 Maf1Q9D0U6 258 aa7.4□□□□□ -1.23
Chm-202ENSMUST00000113388 DcpsQ9DAR7 338 aa7.4□□□□□ -1.23
Chm-202ENSMUST00000113388 Kat2bQ9JHD1 813 aa7.4□□□□□ -1.23
Chm-202ENSMUST00000113388 Slc12a7Q9WVL3 1083 aa7.4□□□□□ -1.23
Chm-202ENSMUST00000113388 Olfr839-ps1A0A1D5RMH6 312 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 Btbd35f28A2CFD5 498 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 Gm3752A6NAT4 150 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 Wdr72D3YYM4 1114 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 Klhl3E0CZ16 587 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 Btbd35f30J3QML3 498 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 Akap1O08715 857 aaKnown RBP7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 IkbkbO88351 757 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 Ms4a2P20490 235 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 Kcnj2P35561 428 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 Epb41P48193 858 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 Arf4P61750 180 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 Ccdc177Q3UHB8 706 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 Stxbp5lQ5DQR4 1185 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 Fam185aQ7TPD2 378 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 B3glctQ8BHT6 489 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 H2-Q4Q8HWB2 354 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 Prpf39Q8K2Z2 665 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 Slc18a1Q8R090 521 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 NclnQ8VCM8 563 aaKnown RBP7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 Psmd12Q9D8W5 456 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 Homer2Q9QWW1 354 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 Cyp11a1Q9QZ82 526 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 Ate1Q9Z2A5 516 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 Lrrc74aA0A1Y7VMD6 494 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 Ugt1a5B2RT14 529 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 Zc3h7aE9PWW6 970 aaKnown RBP7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 Trdmt1O55055 415 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 KitP05532 979 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 Alas2P08680 587 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 Hk1P17710 974 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 Bmi1P25916 324 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 Cxcr2P35343 359 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 Cfl2P45591 166 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 Mkl2P59759 1080 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 TgfbiP82198 683 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 Traf3ip1Q149C2 625 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 SpoplQ2M2N2 392 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 Tmtc1Q3UV71 942 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 AW551984Q8BGF0 804 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 Bola2Q8BGS2 86 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 Tmem214Q8BM55 687 aaKnown RBP7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 Sh3rf3Q8C120 878 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 Rsad2Q8CBB9 362 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 Cdk8Q8R3L8 464 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 IrgqQ8VIM9 583 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 Rwdd4Q9CPR1 188 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 Thap2Q9D305 217 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 Terb2Q9D494 218 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 Ccnl2Q9JJA7 518 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 Cnga3Q9JJZ8 631 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 Pld1Q9Z280 1074 aa7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 HnrnpfQ9Z2X1 415 aaKnown RBP7.39□□□□□ -1.23
Chm-202ENSMUST00000113388 Chd5A2A8L1 1946 aa7.39□□□□□ -1.23
Retrieved 100 of 22,080 RNA–protein pairs in 134.1 ms