RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 CACNG3O60359 315 aa14.77□□□□□ -0.05
NKX3-1-202ENST00000523261 ATP2C2O75185 946 aa14.77□□□□□ -0.05
NKX3-1-202ENST00000523261 BDNFP23560 247 aa14.77□□□□□ -0.05
NKX3-1-202ENST00000523261 PCSK1P29120 753 aa14.77□□□□□ -0.05
NKX3-1-202ENST00000523261 ADSSP30520 456 aa14.77□□□□□ -0.05
NKX3-1-202ENST00000523261 CTSKP43235 329 aa14.77□□□□□ -0.05
NKX3-1-202ENST00000523261 LHX1P48742 406 aa14.77□□□□□ -0.05
NKX3-1-202ENST00000523261 NOP14P78316 857 aaKnown RBP14.77□□□□□ -0.05
NKX3-1-202ENST00000523261 TAF10Q12962 218 aa14.77□□□□□ -0.05
NKX3-1-202ENST00000523261 STARD3Q14849 445 aa14.77□□□□□ -0.05
NKX3-1-202ENST00000523261 BROXQ5VW32 411 aa14.77□□□□□ -0.05
NKX3-1-202ENST00000523261 LAYNQ6UX15 382 aa14.77□□□□□ -0.05
NKX3-1-202ENST00000523261 SKAP1Q86WV1 359 aa14.77□□□□□ -0.05
NKX3-1-202ENST00000523261 C4orf32Q8N8J7 132 aa14.77□□□□□ -0.05
NKX3-1-202ENST00000523261 SNRNP27Q8WVK2 155 aaKnown RBP14.77□□□□□ -0.05
NKX3-1-202ENST00000523261 SNX19Q92543 992 aa14.77□□□□□ -0.05
NKX3-1-202ENST00000523261 WBP2Q969T9 261 aa14.77□□□□□ -0.05
NKX3-1-202ENST00000523261 MYLPFQ96A32 169 aa14.77□□□□□ -0.05
NKX3-1-202ENST00000523261 NAF1Q96HR8 494 aaKnown RBP14.77□□□□□ -0.05
NKX3-1-202ENST00000523261 CNDP2Q96KP4 475 aaKnown RBP14.77□□□□□ -0.05
NKX3-1-202ENST00000523261 NUP58Q9BVL2 599 aa14.77□□□□□ -0.05
NKX3-1-202ENST00000523261 TM6SF1Q9BZW5 370 aa14.77□□□□□ -0.05
NKX3-1-202ENST00000523261 PCED1AQ9H1Q7 454 aa14.77□□□□□ -0.05
NKX3-1-202ENST00000523261 TM9SF3Q9HD45 589 aa14.77□□□□□ -0.05
NKX3-1-202ENST00000523261 PDRG1Q9NUG6 133 aa14.77□□□□□ -0.05
NKX3-1-202ENST00000523261 EHD2Q9NZN4 543 aa14.77□□□□□ -0.05
NKX3-1-202ENST00000523261 MAGEC2Q9UBF1 373 aaPredicted RBP14.77□□□□□ -0.05
NKX3-1-202ENST00000523261 STON1Q9Y6Q2 735 aa14.77□□□□□ -0.05
NKX3-1-202ENST00000523261 COCHO43405 550 aa14.76□□□□□ -0.05
NKX3-1-202ENST00000523261 TRAK2O60296 914 aa14.76□□□□□ -0.05
NKX3-1-202ENST00000523261 LDOC1O95751 146 aaPredicted RBP14.76□□□□□ -0.05
NKX3-1-202ENST00000523261 ANXA13P27216 316 aa14.76□□□□□ -0.05
NKX3-1-202ENST00000523261 POLR2BP30876 1174 aaKnown RBP14.76□□□□□ -0.05
NKX3-1-202ENST00000523261 GATAD2AQ86YP4 633 aa14.76□□□□□ -0.05
NKX3-1-202ENST00000523261 TMPRSS6Q8IU80 811 aa14.76□□□□□ -0.05
NKX3-1-202ENST00000523261 ADGRF2Q8IZF7 708 aa14.76□□□□□ -0.05
NKX3-1-202ENST00000523261 SIPA1Q96FS4 1042 aa14.76□□□□□ -0.05
NKX3-1-202ENST00000523261 HIC2Q96JB3 615 aa14.76□□□□□ -0.05
NKX3-1-202ENST00000523261 TRIM9Q9C026 710 aa14.76□□□□□ -0.05
NKX3-1-202ENST00000523261 C6orf106Q9H6K1 298 aaPredicted RBP14.76□□□□□ -0.05
NKX3-1-202ENST00000523261 LARSQ9P2J5 1176 aaKnown RBP14.76□□□□□ -0.05
NKX3-1-202ENST00000523261 AGAP1Q9UPQ3 857 aa14.76□□□□□ -0.05
NKX3-1-202ENST00000523261 SH3BP1Q9Y3L3 701 aa14.76□□□□□ -0.05
NKX3-1-202ENST00000523261 A0A1B0GTQ1 180 aa14.75□□□□□ -0.05
NKX3-1-202ENST00000523261 TYRP14679 529 aa14.75□□□□□ -0.05
NKX3-1-202ENST00000523261 PCBP4P57723 403 aaKnown RBP14.75□□□□□ -0.05
NKX3-1-202ENST00000523261 PSMC1P62191 440 aaKnown RBP14.75□□□□□ -0.05
NKX3-1-202ENST00000523261 ORC1Q13415 861 aa14.75□□□□□ -0.05
NKX3-1-202ENST00000523261 SCARA3Q6AZY7 606 aa14.75□□□□□ -0.05
NKX3-1-202ENST00000523261 CACTIN-AS1Q8N1I8 211 aa14.75□□□□□ -0.05
NKX3-1-202ENST00000523261 TSC1Q92574 1164 aa14.75□□□□□ -0.05
NKX3-1-202ENST00000523261 SLITRK1Q96PX8 696 aa14.75□□□□□ -0.05
NKX3-1-202ENST00000523261 XPO6Q96QU8 1125 aaKnown RBP14.75□□□□□ -0.05
NKX3-1-202ENST00000523261 SYT15Q9BQS2 421 aa14.75□□□□□ -0.05
NKX3-1-202ENST00000523261 MMTAG2Q9BU76 263 aaKnown RBP14.75□□□□□ -0.05
NKX3-1-202ENST00000523261 CRTAC1Q9NQ79 661 aa14.75□□□□□ -0.05
NKX3-1-202ENST00000523261 GDAP2Q9NXN4 497 aa14.75□□□□□ -0.05
NKX3-1-202ENST00000523261 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.75□□□□□ -0.05
NKX3-1-202ENST00000523261 TP53BP1Q12888 1972 aaPredicted RBP14.74□□□□□ -0.05
NKX3-1-202ENST00000523261 NPHP3-ACAD11A0A0J9YXS1 232 aa14.74□□□□□ -0.05
NKX3-1-202ENST00000523261 TISP43B9A030 160 aa14.74□□□□□ -0.05
NKX3-1-202ENST00000523261 ANKRD63C9JTQ0 380 aa14.74□□□□□ -0.05
NKX3-1-202ENST00000523261 NEDD8-MDP1E9PL57 170 aa14.74□□□□□ -0.05
NKX3-1-202ENST00000523261 F8VP50 259 aa14.74□□□□□ -0.05
NKX3-1-202ENST00000523261 TERTO14746 1132 aaKnown RBP14.74□□□□□ -0.05
NKX3-1-202ENST00000523261 DFNA5O60443 496 aa14.74□□□□□ -0.05
NKX3-1-202ENST00000523261 ITGB3P05106 788 aa14.74□□□□□ -0.05
NKX3-1-202ENST00000523261 CISD3P0C7P0 127 aa14.74□□□□□ -0.05
NKX3-1-202ENST00000523261 ZNF132P52740 706 aa14.74□□□□□ -0.05
NKX3-1-202ENST00000523261 POU5F1Q01860 360 aaKnown RBP14.74□□□□□ -0.05
NKX3-1-202ENST00000523261 ENPP2Q13822 863 aa14.74□□□□□ -0.05
NKX3-1-202ENST00000523261 TRIM29Q14134 588 aa14.74□□□□□ -0.05
NKX3-1-202ENST00000523261 TTC38Q5R3I4 469 aa14.74□□□□□ -0.05
NKX3-1-202ENST00000523261 KRT79Q5XKE5 535 aa14.74□□□□□ -0.05
NKX3-1-202ENST00000523261 CRELD2Q6UXH1 353 aaPredicted RBP14.74□□□□□ -0.05
NKX3-1-202ENST00000523261 NT5DC4Q86YG4 428 aa14.74□□□□□ -0.05
NKX3-1-202ENST00000523261 TOP6BLQ8N6T0 577 aa14.74□□□□□ -0.05
NKX3-1-202ENST00000523261 LRRC52Q8N7C0 313 aa14.74□□□□□ -0.05
NKX3-1-202ENST00000523261 C1orf127Q8N9H9 656 aa14.74□□□□□ -0.05
NKX3-1-202ENST00000523261 SYT2Q8N9I0 419 aaPredicted RBP14.74□□□□□ -0.05
NKX3-1-202ENST00000523261 CXorf38Q8TB03 319 aa14.74□□□□□ -0.05
NKX3-1-202ENST00000523261 PRCCQ92733 491 aaPredicted RBP14.74□□□□□ -0.05
NKX3-1-202ENST00000523261 C8orf48Q96LL4 319 aa14.74□□□□□ -0.05
NKX3-1-202ENST00000523261 BBS2Q9BXC9 721 aa14.74□□□□□ -0.05
NKX3-1-202ENST00000523261 ANKMY1Q9P2S6 941 aa14.74□□□□□ -0.05
NKX3-1-202ENST00000523261 SNX9Q9Y5X1 595 aa14.74□□□□□ -0.05
NKX3-1-202ENST00000523261 BOD1L1Q8NFC6 3051 aa14.74□□□□□ -0.05
NKX3-1-202ENST00000523261 CKAP5Q14008 2032 aa14.73□□□□□ -0.05
NKX3-1-202ENST00000523261 LAD1O00515 517 aa14.73□□□□□ -0.05
NKX3-1-202ENST00000523261 SCP2P22307 547 aa14.73□□□□□ -0.05
NKX3-1-202ENST00000523261 GLDCP23378 1020 aa14.73□□□□□ -0.05
NKX3-1-202ENST00000523261 LMO2P25791 158 aa14.73□□□□□ -0.05
NKX3-1-202ENST00000523261 DGKGP49619 791 aa14.73□□□□□ -0.05
NKX3-1-202ENST00000523261 COPAP53621 1224 aa14.73□□□□□ -0.05
NKX3-1-202ENST00000523261 WNT7BP56706 349 aa14.73□□□□□ -0.05
NKX3-1-202ENST00000523261 VAC14Q08AM6 782 aa14.73□□□□□ -0.05
NKX3-1-202ENST00000523261 SOWAHAQ2M3V2 549 aa14.73□□□□□ -0.05
NKX3-1-202ENST00000523261 TDRD10Q5VZ19 366 aaKnown RBP14.73□□□□□ -0.05
NKX3-1-202ENST00000523261 ADALQ6DHV7 355 aa14.73□□□□□ -0.05
NKX3-1-202ENST00000523261 FAM124AQ86V42 546 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms