RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 SNX18Q96RF0 628 aa3.74□□□□□ -1.81
RBM28-207ENST00000488249 SELENOOQ9BVL4 669 aa3.74□□□□□ -1.81
RBM28-207ENST00000488249 CIPCQ9C0C6 399 aa3.74□□□□□ -1.81
RBM28-207ENST00000488249 GJB4Q9NTQ9 266 aa3.74□□□□□ -1.81
RBM28-207ENST00000488249 TFCP2L1Q9NZI6 479 aa3.74□□□□□ -1.81
RBM28-207ENST00000488249 LPAR3Q9UBY5 353 aa3.74□□□□□ -1.81
RBM28-207ENST00000488249 NKX1-2Q9UD57 310 aaPredicted RBP3.74□□□□□ -1.81
RBM28-207ENST00000488249 STEAP1Q9UHE8 339 aa3.74□□□□□ -1.81
RBM28-207ENST00000488249 PHTF1Q9UMS5 762 aa3.74□□□□□ -1.81
RBM28-207ENST00000488249 SLC27A6Q9Y2P4 619 aa3.74□□□□□ -1.81
RBM28-207ENST00000488249 LINC01548A6NM66 108 aa3.73□□□□□ -1.81
RBM28-207ENST00000488249 A8MVJ9 347 aa3.73□□□□□ -1.81
RBM28-207ENST00000488249 TISP43B9A030 160 aa3.73□□□□□ -1.81
RBM28-207ENST00000488249 RASA4BC9J798 803 aa3.73□□□□□ -1.81
RBM28-207ENST00000488249 RASA4O43374 803 aa3.73□□□□□ -1.81
RBM28-207ENST00000488249 KCNQ3O43525 872 aa3.73□□□□□ -1.81
RBM28-207ENST00000488249 NCK2O43639 380 aa3.73□□□□□ -1.81
RBM28-207ENST00000488249 ZNF37AP17032 561 aaPredicted RBP3.73□□□□□ -1.81
RBM28-207ENST00000488249 TNFSF4P23510 183 aa3.73□□□□□ -1.81
RBM28-207ENST00000488249 RBL1P28749 1068 aa3.73□□□□□ -1.81
RBM28-207ENST00000488249 ATICP31939 592 aa3.73□□□□□ -1.81
RBM28-207ENST00000488249 DIO1P49895 249 aa3.73□□□□□ -1.81
RBM28-207ENST00000488249 RENBPP51606 427 aa3.73□□□□□ -1.81
RBM28-207ENST00000488249 ALDH5A1P51649 535 aaPredicted RBP3.73□□□□□ -1.81
RBM28-207ENST00000488249 NEK3P51956 506 aa3.73□□□□□ -1.81
RBM28-207ENST00000488249 MRPS21P82921 87 aaKnown RBP3.73□□□□□ -1.81
RBM28-207ENST00000488249 LMAN2Q12907 356 aa3.73□□□□□ -1.81
RBM28-207ENST00000488249 SLC10A2Q12908 348 aaPredicted RBP3.73□□□□□ -1.81
RBM28-207ENST00000488249 MYBPC2Q14324 1141 aa3.73□□□□□ -1.81
RBM28-207ENST00000488249 CLCA4Q14CN2 919 aa3.73□□□□□ -1.81
RBM28-207ENST00000488249 ARL13BQ3SXY8 428 aa3.73□□□□□ -1.81
RBM28-207ENST00000488249 FAM209BQ5JX69 171 aa3.73□□□□□ -1.81
RBM28-207ENST00000488249 COLEC12Q5KU26 742 aa3.73□□□□□ -1.81
RBM28-207ENST00000488249 PRAMEF17Q5VTA0 474 aa3.73□□□□□ -1.81
RBM28-207ENST00000488249 WDR78Q5VTH9 848 aa3.73□□□□□ -1.81
RBM28-207ENST00000488249 DENND2CQ68D51 928 aa3.73□□□□□ -1.81
RBM28-207ENST00000488249 HIBCHQ6NVY1 386 aaPredicted RBP3.73□□□□□ -1.81
RBM28-207ENST00000488249 CRTC1Q6UUV9 634 aa3.73□□□□□ -1.81
RBM28-207ENST00000488249 BCDIN3DQ7Z5W3 292 aaKnown RBP3.73□□□□□ -1.81
RBM28-207ENST00000488249 CCDC150Q8NCX0 1101 aa3.73□□□□□ -1.81
RBM28-207ENST00000488249 MBD3L2Q8NHZ7 208 aaPredicted RBP3.73□□□□□ -1.81
RBM28-207ENST00000488249 BRI3BPQ8WY22 251 aa3.73□□□□□ -1.81
RBM28-207ENST00000488249 SECISBP2LQ93073 1101 aaKnown RBP3.73□□□□□ -1.81
RBM28-207ENST00000488249 RIPOR3Q96MK2 946 aa3.73□□□□□ -1.81
RBM28-207ENST00000488249 RPS6KC1Q96S38 1066 aa3.73□□□□□ -1.81
RBM28-207ENST00000488249 MAGEB5Q9BZ81 275 aa3.73□□□□□ -1.81
RBM28-207ENST00000488249 SLC25A32Q9H2D1 315 aa3.73□□□□□ -1.81
RBM28-207ENST00000488249 ZBTB26Q9HCK0 441 aa3.73□□□□□ -1.81
RBM28-207ENST00000488249 SNX15Q9NRS6 342 aa3.73□□□□□ -1.81
RBM28-207ENST00000488249 ADARB2Q9NS39 739 aaKnown RBP3.73□□□□□ -1.81
RBM28-207ENST00000488249 MGAT4CQ9UBM8 478 aa3.73□□□□□ -1.81
RBM28-207ENST00000488249 FRMD4BQ9Y2L6 1034 aa3.73□□□□□ -1.81
RBM28-207ENST00000488249 COMMD10Q9Y6G5 202 aa3.73□□□□□ -1.81
RBM28-207ENST00000488249 COL15A1P39059 1388 aa3.73□□□□□ -1.81
RBM28-207ENST00000488249 POC1B-GALNT4F8VUJ3 575 aa3.72□□□□□ -1.81
RBM28-207ENST00000488249 TMPRSS11DO60235 418 aa3.72□□□□□ -1.81
RBM28-207ENST00000488249 COQ9O75208 318 aa3.72□□□□□ -1.81
RBM28-207ENST00000488249 FGF18O76093 207 aa3.72□□□□□ -1.81
RBM28-207ENST00000488249 HARSP12081 509 aaKnown RBP3.72□□□□□ -1.81
RBM28-207ENST00000488249 BDNFP23560 247 aa3.72□□□□□ -1.81
RBM28-207ENST00000488249 MCM5P33992 734 aa3.72□□□□□ -1.81
RBM28-207ENST00000488249 HTR7P34969 479 aa3.72□□□□□ -1.81
RBM28-207ENST00000488249 EIF4A1P60842 406 aaKnown RBP3.72□□□□□ -1.81
RBM28-207ENST00000488249 TUBA4AP68366 448 aa3.72□□□□□ -1.81
RBM28-207ENST00000488249 GRM1Q13255 1194 aa3.72□□□□□ -1.81
RBM28-207ENST00000488249 FHL3Q13643 280 aa3.72□□□□□ -1.81
RBM28-207ENST00000488249 PMS2P11Q13670 270 aa3.72□□□□□ -1.81
RBM28-207ENST00000488249 ST3GAL2Q16842 350 aa3.72□□□□□ -1.81
RBM28-207ENST00000488249 MAP9Q49MG5 647 aa3.72□□□□□ -1.81
RBM28-207ENST00000488249 IZUMO3Q5VZ72 239 aa3.72□□□□□ -1.81
RBM28-207ENST00000488249 USP17L6PQ6QN14 398 aa3.72□□□□□ -1.81
RBM28-207ENST00000488249 ZNF782Q6ZMW2 699 aaPredicted RBP3.72□□□□□ -1.81
RBM28-207ENST00000488249 KIAA0408Q6ZU52 694 aa3.72□□□□□ -1.81
RBM28-207ENST00000488249 CHSY1Q86X52 802 aa3.72□□□□□ -1.81
RBM28-207ENST00000488249 TXLNBQ8N3L3 684 aa3.72□□□□□ -1.81
RBM28-207ENST00000488249 FSTL5Q8N475 847 aaPredicted RBP3.72□□□□□ -1.81
RBM28-207ENST00000488249 GALNT4Q8N4A0 578 aa3.72□□□□□ -1.81
RBM28-207ENST00000488249 OR2C3Q8N628 320 aa3.72□□□□□ -1.81
RBM28-207ENST00000488249 PNLDC1Q8NA58 520 aaKnown RBP3.72□□□□□ -1.81
RBM28-207ENST00000488249 NGDNQ8NEJ9 315 aaKnown RBP3.72□□□□□ -1.81
RBM28-207ENST00000488249 SUN3Q8TAQ9 357 aa3.72□□□□□ -1.81
RBM28-207ENST00000488249 CCDC138Q96M89 665 aa3.72□□□□□ -1.81
RBM28-207ENST00000488249 MMS19Q96T76 1030 aa3.72□□□□□ -1.81
RBM28-207ENST00000488249 MYD88Q99836 296 aa3.72□□□□□ -1.81
RBM28-207ENST00000488249 GDF15Q99988 308 aa3.72□□□□□ -1.81
RBM28-207ENST00000488249 EIF2AQ9BY44 585 aaKnown RBP3.72□□□□□ -1.81
RBM28-207ENST00000488249 ASIC5Q9NY37 505 aa3.72□□□□□ -1.81
RBM28-207ENST00000488249 TMOD4Q9NZQ9 345 aa3.72□□□□□ -1.81
RBM28-207ENST00000488249 MAN2B2Q9Y2E5 1009 aa3.72□□□□□ -1.81
RBM28-207ENST00000488249 PCSK5Q92824 1860 aa3.72□□□□□ -1.81
RBM28-207ENST00000488249 CLSPNQ9HAW4 1339 aa3.71□□□□□ -1.81
RBM28-207ENST00000488249 TCRBV5S1A1TA0A578 114 aa3.71□□□□□ -1.82
RBM28-207ENST00000488249 CCDC189A1A4V9 331 aa3.71□□□□□ -1.82
RBM28-207ENST00000488249 CGB1A6NKQ9 187 aa3.71□□□□□ -1.82
RBM28-207ENST00000488249 PRRT4C9JH25 899 aa3.71□□□□□ -1.82
RBM28-207ENST00000488249 CCNT2O60583 730 aaKnown RBP3.71□□□□□ -1.82
RBM28-207ENST00000488249 NDST3O95803 873 aa3.71□□□□□ -1.82
RBM28-207ENST00000488249 LATS1O95835 1130 aa3.71□□□□□ -1.82
RBM28-207ENST00000488249 MT-CO3P00414 261 aa3.71□□□□□ -1.82
RBM28-207ENST00000488249 TMEM225BP0DP42 221 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms