RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 AFF3P51826 1226 aaKnown RBP8.13□□□□□ -1.11
PDPN-205ENST00000487038 RBP5P82980 135 aa8.13□□□□□ -1.11
PDPN-205ENST00000487038 TAF10Q12962 218 aa8.13□□□□□ -1.11
PDPN-205ENST00000487038 DHX8Q14562 1220 aaKnown RBP8.13□□□□□ -1.11
PDPN-205ENST00000487038 CCDC142Q17RM4 750 aa8.13□□□□□ -1.11
PDPN-205ENST00000487038 TMEM119Q4V9L6 283 aa8.13□□□□□ -1.11
PDPN-205ENST00000487038 CCDC157Q569K6 752 aa8.13□□□□□ -1.11
PDPN-205ENST00000487038 ARSHQ5FYA8 562 aa8.13□□□□□ -1.11
PDPN-205ENST00000487038 HECTD3Q5T447 861 aa8.13□□□□□ -1.11
PDPN-205ENST00000487038 CRELD2Q6UXH1 353 aaPredicted RBP8.13□□□□□ -1.11
PDPN-205ENST00000487038 HS2ST1Q7LGA3 356 aa8.13□□□□□ -1.11
PDPN-205ENST00000487038 GPR155Q7Z3F1 870 aa8.13□□□□□ -1.11
PDPN-205ENST00000487038 MIB1Q86YT6 1006 aa8.13□□□□□ -1.11
PDPN-205ENST00000487038 BBS7Q8IWZ6 715 aa8.13□□□□□ -1.11
PDPN-205ENST00000487038 PCED1BQ96HM7 432 aa8.13□□□□□ -1.11
PDPN-205ENST00000487038 C8orf48Q96LL4 319 aa8.13□□□□□ -1.11
PDPN-205ENST00000487038 AK8Q96MA6 479 aa8.13□□□□□ -1.11
PDPN-205ENST00000487038 FAM213AQ9BRX8 229 aa8.13□□□□□ -1.11
PDPN-205ENST00000487038 BBS2Q9BXC9 721 aa8.13□□□□□ -1.11
PDPN-205ENST00000487038 PCED1AQ9H1Q7 454 aa8.13□□□□□ -1.11
PDPN-205ENST00000487038 ST6GALNAC4Q9H4F1 302 aa8.13□□□□□ -1.11
PDPN-205ENST00000487038 CD93Q9NPY3 652 aa8.13□□□□□ -1.11
PDPN-205ENST00000487038 WSB2Q9NYS7 404 aaPredicted RBP8.13□□□□□ -1.11
PDPN-205ENST00000487038 USP36Q9P275 1121 aaKnown RBP8.13□□□□□ -1.11
PDPN-205ENST00000487038 WDR35Q9P2L0 1181 aa8.13□□□□□ -1.11
PDPN-205ENST00000487038 FTSJ1Q9UET6 329 aa8.13□□□□□ -1.11
PDPN-205ENST00000487038 LSM7Q9UK45 103 aaKnown RBP8.13□□□□□ -1.11
PDPN-205ENST00000487038 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.13□□□□□ -1.11
PDPN-205ENST00000487038 RAD54BQ9Y620 910 aa8.13□□□□□ -1.11
PDPN-205ENST00000487038 SPTAN1Q13813 2472 aaKnown RBP8.13□□□□□ -1.11
PDPN-205ENST00000487038 UBR5O95071 2799 aaPredicted RBP8.12□□□□□ -1.11
PDPN-205ENST00000487038 ATP8B3O60423 1300 aa8.12□□□□□ -1.11
PDPN-205ENST00000487038 TISP43B9A030 160 aa8.12□□□□□ -1.11
PDPN-205ENST00000487038 ERVH48-1M5A8F1 160 aa8.12□□□□□ -1.11
PDPN-205ENST00000487038 COCHO43405 550 aa8.12□□□□□ -1.11
PDPN-205ENST00000487038 HCRTO43612 131 aa8.12□□□□□ -1.11
PDPN-205ENST00000487038 CACNG3O60359 315 aa8.12□□□□□ -1.11
PDPN-205ENST00000487038 TNNC2P02585 160 aa8.12□□□□□ -1.11
PDPN-205ENST00000487038 IRF1P10914 325 aa8.12□□□□□ -1.11
PDPN-205ENST00000487038 TYRP14679 529 aa8.12□□□□□ -1.11
PDPN-205ENST00000487038 WARSP23381 471 aaKnown RBP8.12□□□□□ -1.11
PDPN-205ENST00000487038 YWHAQP27348 245 aa8.12□□□□□ -1.11
PDPN-205ENST00000487038 ITPKBP27987 946 aa8.12□□□□□ -1.11
PDPN-205ENST00000487038 SF3A1Q15459 793 aaKnown RBP8.12□□□□□ -1.11
PDPN-205ENST00000487038 IL17AQ16552 155 aa8.12□□□□□ -1.11
PDPN-205ENST00000487038 SOWAHAQ2M3V2 549 aa8.12□□□□□ -1.11
PDPN-205ENST00000487038 TAF1BQ53T94 588 aaPredicted RBP8.12□□□□□ -1.11
PDPN-205ENST00000487038 RILPL1Q5EBL4 403 aa8.12□□□□□ -1.11
PDPN-205ENST00000487038 ARL6IP4Q66PJ3 421 aaKnown RBP8.12□□□□□ -1.11
PDPN-205ENST00000487038 DHRS13Q6UX07 377 aa8.12□□□□□ -1.11
PDPN-205ENST00000487038 CCDC83Q8IWF9 413 aa8.12□□□□□ -1.11
PDPN-205ENST00000487038 NUP93Q8N1F7 819 aa8.12□□□□□ -1.11
PDPN-205ENST00000487038 MYCBPAPQ8TBZ2 947 aa8.12□□□□□ -1.11
PDPN-205ENST00000487038 UCMAQ8WVF2 138 aa8.12□□□□□ -1.11
PDPN-205ENST00000487038 SNX19Q92543 992 aa8.12□□□□□ -1.11
PDPN-205ENST00000487038 PRCCQ92733 491 aaPredicted RBP8.12□□□□□ -1.11
PDPN-205ENST00000487038 FBXO32Q969P5 355 aa8.12□□□□□ -1.11
PDPN-205ENST00000487038 ERLEC1Q96DZ1 483 aa8.12□□□□□ -1.11
PDPN-205ENST00000487038 MMS19Q96T76 1030 aa8.12□□□□□ -1.11
PDPN-205ENST00000487038 ACOX2Q99424 681 aa8.12□□□□□ -1.11
PDPN-205ENST00000487038 NUP58Q9BVL2 599 aa8.12□□□□□ -1.11
PDPN-205ENST00000487038 SLC6A17Q9H1V8 727 aa8.12□□□□□ -1.11
PDPN-205ENST00000487038 CLMPQ9H6B4 373 aa8.12□□□□□ -1.11
PDPN-205ENST00000487038 CD248Q9HCU0 757 aa8.12□□□□□ -1.11
PDPN-205ENST00000487038 CRTAC1Q9NQ79 661 aa8.12□□□□□ -1.11
PDPN-205ENST00000487038 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.12□□□□□ -1.11
PDPN-205ENST00000487038 EIF2B4Q9UI10 523 aaKnown RBP8.12□□□□□ -1.11
PDPN-205ENST00000487038 PCDHGA1Q9Y5H4 931 aa8.12□□□□□ -1.11
PDPN-205ENST00000487038 AK5Q9Y6K8 562 aa8.12□□□□□ -1.11
PDPN-205ENST00000487038 MYO9AB2RTY4 2548 aa8.11□□□□□ -1.11
PDPN-205ENST00000487038 PTPRJQ12913 1337 aa8.11□□□□□ -1.11
PDPN-205ENST00000487038 METTL12A8MUP2 240 aa8.11□□□□□ -1.11
PDPN-205ENST00000487038 PCDHGA12O60330 932 aa8.11□□□□□ -1.11
PDPN-205ENST00000487038 DFNA5O60443 496 aa8.11□□□□□ -1.11
PDPN-205ENST00000487038 SYNCRIPO60506 623 aaKnown RBP8.11□□□□□ -1.11
PDPN-205ENST00000487038 ATP2C2O75185 946 aa8.11□□□□□ -1.11
PDPN-205ENST00000487038 JUPP14923 745 aa8.11□□□□□ -1.11
PDPN-205ENST00000487038 LMO2P25791 158 aa8.11□□□□□ -1.11
PDPN-205ENST00000487038 UBA7P41226 1012 aa8.11□□□□□ -1.11
PDPN-205ENST00000487038 GRIA4P48058 902 aa8.11□□□□□ -1.11
PDPN-205ENST00000487038 TOB1P50616 345 aaPredicted RBP8.11□□□□□ -1.11
PDPN-205ENST00000487038 TPMTP51580 245 aa8.11□□□□□ -1.11
PDPN-205ENST00000487038 NEK4P51957 841 aa8.11□□□□□ -1.11
PDPN-205ENST00000487038 CDH8P55286 799 aa8.11□□□□□ -1.11
PDPN-205ENST00000487038 SEMG2Q02383 582 aa8.11□□□□□ -1.11
PDPN-205ENST00000487038 ORC1Q13415 861 aa8.11□□□□□ -1.11
PDPN-205ENST00000487038 SURF1Q15526 300 aa8.11□□□□□ -1.11
PDPN-205ENST00000487038 PTPRNQ16849 979 aa8.11□□□□□ -1.11
PDPN-205ENST00000487038 FUT11Q495W5 492 aa8.11□□□□□ -1.11
PDPN-205ENST00000487038 MDH1BQ5I0G3 518 aa8.11□□□□□ -1.11
PDPN-205ENST00000487038 LARP1BQ659C4 914 aaKnown RBP8.11□□□□□ -1.11
PDPN-205ENST00000487038 ADAT2Q7Z6V5 191 aaKnown RBP8.11□□□□□ -1.11
PDPN-205ENST00000487038 TMEM25Q86YD3 366 aa8.11□□□□□ -1.11
PDPN-205ENST00000487038 MARCH9Q86YJ5 346 aa8.11□□□□□ -1.11
PDPN-205ENST00000487038 SNIP1Q8TAD8 396 aaKnown RBP8.11□□□□□ -1.11
PDPN-205ENST00000487038 NOC3LQ8WTT2 800 aaKnown RBP8.11□□□□□ -1.11
PDPN-205ENST00000487038 KBTBD7Q8WVZ9 684 aa8.11□□□□□ -1.11
PDPN-205ENST00000487038 LARP4BQ92615 738 aaKnown RBP8.11□□□□□ -1.11
PDPN-205ENST00000487038 IGSF8Q969P0 613 aa8.11□□□□□ -1.11
PDPN-205ENST00000487038 SAAL1Q96ER3 474 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms