RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 DRAP1Q14919 205 aaPredicted RBP5.86□□□□□ -1.47
VPS41-211ENST00000466017 TMEM132DQ14C87 1099 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 C10orf76Q5T2E6 689 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 SFMBT2Q5VUG0 894 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 TWF2Q6IBS0 349 aaKnown RBP5.86□□□□□ -1.47
VPS41-211ENST00000466017 JADE1Q6IE81 842 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 IQCEQ6IPM2 695 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 RRAGAQ7L523 313 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 NLRC3Q7RTR2 1065 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 LIMS2Q7Z4I7 341 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 CDR2LQ86X02 465 aaPredicted RBP5.86□□□□□ -1.47
VPS41-211ENST00000466017 ECHDC2Q86YB7 292 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 FAM71AQ8IYT1 594 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 GSTCDQ8NEC7 633 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 OR5B17Q8NGF7 314 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 SPATA18Q8TC71 538 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 CPLX3Q8WVH0 158 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 UBE2Q2Q8WVN8 375 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 SHC3Q92529 594 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 PPP1R10Q96QC0 940 aaKnown RBP5.86□□□□□ -1.47
VPS41-211ENST00000466017 SPAG5Q96R06 1193 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 EIF3CQ99613 913 aaKnown RBP5.86□□□□□ -1.47
VPS41-211ENST00000466017 GPR62Q9BZJ7 368 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 IMPG2Q9BZV3 1241 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 TRIM6Q9C030 488 aaPredicted RBP5.86□□□□□ -1.47
VPS41-211ENST00000466017 GPR88Q9GZN0 384 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 XYLT2Q9H1B5 865 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 UBE2TQ9NPD8 197 aaPredicted RBP5.86□□□□□ -1.47
VPS41-211ENST00000466017 SLC38A7Q9NVC3 462 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 GDAP2Q9NXN4 497 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 DPP3Q9NY33 737 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 LMCD1Q9NZU5 365 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 TBX21Q9UL17 535 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 PCDHB2Q9Y5E7 798 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 PCDHA11Q9Y5I1 949 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 FHOD1Q9Y613 1164 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 EPN1Q9Y6I3 576 aaPredicted RBP5.86□□□□□ -1.47
VPS41-211ENST00000466017 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.86□□□□□ -1.47
VPS41-211ENST00000466017 CITO14578 2027 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 ANK1P16157 1881 aa5.85□□□□□ -1.47
VPS41-211ENST00000466017 PTPRJQ12913 1337 aa5.85□□□□□ -1.47
VPS41-211ENST00000466017 ZNF503-AS2A6NEH8 195 aa5.85□□□□□ -1.47
VPS41-211ENST00000466017 GOLGA6L9A6NEM1 432 aa5.85□□□□□ -1.47
VPS41-211ENST00000466017 LRRC53A6NM62 1247 aa5.85□□□□□ -1.47
VPS41-211ENST00000466017 F8VZ95 297 aa5.85□□□□□ -1.47
VPS41-211ENST00000466017 FOXN3O00409 490 aaPredicted RBP5.85□□□□□ -1.47
VPS41-211ENST00000466017 ENPP3O14638 875 aa5.85□□□□□ -1.47
VPS41-211ENST00000466017 MGEA5O60502 916 aa5.85□□□□□ -1.47
VPS41-211ENST00000466017 NBNO60934 754 aa5.85□□□□□ -1.47
VPS41-211ENST00000466017 EFCAB14O75071 495 aa5.85□□□□□ -1.47
VPS41-211ENST00000466017 RECQL4O94761 1208 aa5.85□□□□□ -1.47
VPS41-211ENST00000466017 THP07101 528 aa5.85□□□□□ -1.47
VPS41-211ENST00000466017 GHRP10912 638 aa5.85□□□□□ -1.47
VPS41-211ENST00000466017 HARSP12081 509 aaKnown RBP5.85□□□□□ -1.47
VPS41-211ENST00000466017 ACTN1P12814 892 aa5.85□□□□□ -1.47
VPS41-211ENST00000466017 P4HA1P13674 534 aa5.85□□□□□ -1.47
VPS41-211ENST00000466017 RAG1P15918 1043 aa5.85□□□□□ -1.47
VPS41-211ENST00000466017 ATF7P17544 494 aaPredicted RBP5.85□□□□□ -1.47
VPS41-211ENST00000466017 YWHAEP62258 255 aaKnown RBP5.85□□□□□ -1.47
VPS41-211ENST00000466017 KRT83P78385 493 aa5.85□□□□□ -1.47
VPS41-211ENST00000466017 TFAMQ00059 246 aaKnown RBP5.85□□□□□ -1.47
VPS41-211ENST00000466017 LRMPQ12912 555 aa5.85□□□□□ -1.47
VPS41-211ENST00000466017 BIRC3Q13489 604 aa5.85□□□□□ -1.47
VPS41-211ENST00000466017 CUL2Q13617 745 aa5.85□□□□□ -1.47
VPS41-211ENST00000466017 BMS1Q14692 1282 aaKnown RBP5.85□□□□□ -1.47
VPS41-211ENST00000466017 PPP1R2P3Q6NXS1 205 aa5.85□□□□□ -1.47
VPS41-211ENST00000466017 THAP5Q7Z6K1 395 aa5.85□□□□□ -1.47
VPS41-211ENST00000466017 TSPYL5Q86VY4 417 aaPredicted RBP5.85□□□□□ -1.47
VPS41-211ENST00000466017 ZNF677Q86XU0 584 aa5.85□□□□□ -1.47
VPS41-211ENST00000466017 TXLNBQ8N3L3 684 aa5.85□□□□□ -1.47
VPS41-211ENST00000466017 UBR7Q8N806 425 aa5.85□□□□□ -1.47
VPS41-211ENST00000466017 DBF4BQ8NFT6 615 aa5.85□□□□□ -1.47
VPS41-211ENST00000466017 SLC30A5Q8TAD4 765 aa5.85□□□□□ -1.47
VPS41-211ENST00000466017 PIWIL2Q8TC59 973 aaKnown RBP5.85□□□□□ -1.47
VPS41-211ENST00000466017 SEPT8Q92599 483 aa5.85□□□□□ -1.47
VPS41-211ENST00000466017 PAWRQ96IZ0 340 aaKnown RBP5.85□□□□□ -1.47
VPS41-211ENST00000466017 CCDC42Q96M95 316 aa5.85□□□□□ -1.47
VPS41-211ENST00000466017 ZNF830Q96NB3 372 aaPredicted RBP5.85□□□□□ -1.47
VPS41-211ENST00000466017 ZMAT2Q96NC0 199 aaKnown RBP5.85□□□□□ -1.47
VPS41-211ENST00000466017 PPP1R16BQ96T49 567 aa5.85□□□□□ -1.47
VPS41-211ENST00000466017 CHP1Q99653 195 aa5.85□□□□□ -1.47
VPS41-211ENST00000466017 ADAM2Q99965 735 aa5.85□□□□□ -1.47
VPS41-211ENST00000466017 SYT11Q9BT88 431 aa5.85□□□□□ -1.47
VPS41-211ENST00000466017 IFIH1Q9BYX4 1025 aaKnown RBP5.85□□□□□ -1.47
VPS41-211ENST00000466017 MCOLN1Q9GZU1 580 aa5.85□□□□□ -1.47
VPS41-211ENST00000466017 ACBD3Q9H3P7 528 aa5.85□□□□□ -1.47
VPS41-211ENST00000466017 APOBEC3GQ9HC16 384 aaKnown RBP5.85□□□□□ -1.47
VPS41-211ENST00000466017 NLRC4Q9NPP4 1024 aa5.85□□□□□ -1.47
VPS41-211ENST00000466017 TMEM161AQ9NX61 479 aa5.85□□□□□ -1.47
VPS41-211ENST00000466017 SLAMF8Q9P0V8 285 aa5.85□□□□□ -1.47
VPS41-211ENST00000466017 ARHGAP20Q9P2F6 1191 aa5.85□□□□□ -1.47
VPS41-211ENST00000466017 SIX4Q9UIU6 781 aa5.85□□□□□ -1.47
VPS41-211ENST00000466017 INTUQ9ULD6 942 aa5.85□□□□□ -1.47
VPS41-211ENST00000466017 KIAA1257Q9ULG3 409 aa5.85□□□□□ -1.47
VPS41-211ENST00000466017 ABHD14A-ACY1A0A1B0GW23 586 aa5.84□□□□□ -1.47
VPS41-211ENST00000466017 MEIS3P2A8K0S8 358 aa5.84□□□□□ -1.47
VPS41-211ENST00000466017 BTNL10A8MVZ5 291 aa5.84□□□□□ -1.47
VPS41-211ENST00000466017 TMEM189-UBE2V1I3L0A0 370 aa5.84□□□□□ -1.47
VPS41-211ENST00000466017 PTGESO14684 152 aa5.84□□□□□ -1.47
VPS41-211ENST00000466017 PJA2O43164 708 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms