RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 AARS2Q5JTZ9 985 aaKnown RBP11.11□□□□□ -0.63
LINC00342-202ENST00000448494 ZFP1Q6P2D0 407 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 NEK5Q6P3R8 708 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 GALNT18Q6P9A2 607 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 FIP1L1Q6UN15 594 aaKnown RBP11.11□□□□□ -0.63
LINC00342-202ENST00000448494 LRRC55Q6ZSA7 311 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 TBC1D10CQ8IV04 446 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 TMEM151BQ8IW70 566 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 PROM2Q8N271 834 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 ABTB2Q8N961 1025 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 CHAC2Q8WUX2 184 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 RFFLQ8WZ73 363 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 C1orf74Q96LT6 269 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 ZNF512Q96ME7 567 aaPredicted RBP11.11□□□□□ -0.63
LINC00342-202ENST00000448494 SNX18Q96RF0 628 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 CCDC106Q9BWC9 280 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 ZNF717Q9BY31 904 aaPredicted RBP11.11□□□□□ -0.63
LINC00342-202ENST00000448494 MKRN2Q9H000 416 aaKnown RBP11.11□□□□□ -0.63
LINC00342-202ENST00000448494 GANQ9H2C0 597 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.11□□□□□ -0.63
LINC00342-202ENST00000448494 POMPQ9Y244 141 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 RNF11Q9Y3C5 154 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 SLC4A4Q9Y6R1 1079 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 ZHX2Q9Y6X8 837 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 ZNF532Q9HCE3 1301 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 A0A1B0GTW7 788 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 DCAF8L1A6NGE4 600 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 hCG_2039718K7EN88 272 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 VWA5AO00534 786 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 BET1O15155 118 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 DYRK3O43781 588 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 SORBS3O60504 671 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 CLPXO76031 633 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 TOMM70O94826 608 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 CSPG5O95196 566 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 COL6A1P12109 1028 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 AOC1P19801 751 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 CD247P20963 164 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 CD9P21926 228 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 ACAT1P24752 427 aaKnown RBP11.11□□□□□ -0.63
LINC00342-202ENST00000448494 GRK2P25098 689 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 RRM2P31350 389 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 RFC1P35251 1148 aaPredicted RBP11.11□□□□□ -0.63
LINC00342-202ENST00000448494 HPCAL1P37235 193 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 SLC26A3P40879 764 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 CLK1P49759 484 aaKnown RBP11.11□□□□□ -0.63
LINC00342-202ENST00000448494 AP2S1P53680 142 aaPredicted RBP11.11□□□□□ -0.63
LINC00342-202ENST00000448494 CDKL1Q00532 357 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 PTPN12Q05209 780 aaKnown RBP11.11□□□□□ -0.63
LINC00342-202ENST00000448494 ZNF211Q13398 564 aaPredicted RBP11.11□□□□□ -0.63
LINC00342-202ENST00000448494 TCIRG1Q13488 830 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 PRKD1Q15139 912 aaPredicted RBP11.11□□□□□ -0.63
LINC00342-202ENST00000448494 MAPRE2Q15555 327 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 FGD3Q5JSP0 725 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 NOP9Q86U38 636 aaKnown RBP11.11□□□□□ -0.63
LINC00342-202ENST00000448494 PRPF39Q86UA1 669 aaKnown RBP11.11□□□□□ -0.63
LINC00342-202ENST00000448494 ALYREFQ86V81 257 aaKnown RBP11.11□□□□□ -0.63
LINC00342-202ENST00000448494 CHSY1Q86X52 802 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 SLC4A11Q8NBS3 891 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 OR10Z1Q8NGY1 313 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 ACDQ96AP0 544 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 VPS33AQ96AX1 596 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 WRNIP1Q96S55 665 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 LPIN3Q9BQK8 851 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 CLSTN3Q9BQT9 956 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 WDR12Q9GZL7 423 aaKnown RBP11.11□□□□□ -0.63
LINC00342-202ENST00000448494 CNNM2Q9H8M5 875 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 CXorf21Q9HAI6 301 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 TNFRSF10DQ9UBN6 386 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 CDC14AQ9UNH5 594 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 ATAD5Q96QE3 1844 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 EXOC1LA0A1B0GW35 172 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 B4E1Z4 1266 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 CLDN25C9JDP6 229 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 NOL3O60936 208 aaKnown RBP11.1□□□□□ -0.63
LINC00342-202ENST00000448494 CHRNB2P17787 502 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 ABCB4P21439 1286 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 ECE1P42892 770 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 NAMPTP43490 491 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 EIF4A1P60842 406 aaKnown RBP11.1□□□□□ -0.63
LINC00342-202ENST00000448494 GNA12Q03113 381 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 CDC20Q12834 499 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 SELPLGQ14242 412 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 PKN2Q16513 984 aaKnown RBP11.1□□□□□ -0.63
LINC00342-202ENST00000448494 SHEQ5VZ18 495 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 CARM1Q86X55 608 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 C4orf33Q8N1A6 199 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 LARGE2Q8N3Y3 721 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 UBL4BQ8N7F7 174 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 EPS8L1Q8TE68 723 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 UPF1Q92900 1129 aaKnown RBP eCLIP11.1□□□□□ -0.63
LINC00342-202ENST00000448494 PMEPA1Q969W9 287 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 SLC39A13Q96H72 371 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 WWP1Q9H0M0 922 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 KCNN2Q9H2S1 579 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 CPNE5Q9HCH3 593 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 SCUBE2Q9NQ36 999 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 FARSBQ9NSD9 589 aaKnown RBP11.1□□□□□ -0.63
LINC00342-202ENST00000448494 DNMT3BQ9UBC3 853 aaKnown RBP11.1□□□□□ -0.63
LINC00342-202ENST00000448494 PPARGC1AQ9UBK2 798 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms