RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 FAM83AQ86UY5 434 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 MAP4K3Q8IVH8 894 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 SPATA6LQ8N4H0 392 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 SCG3Q8WXD2 468 aaKnown RBP9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 USP13Q92995 863 aaPredicted RBP9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 GDF3Q9NR23 364 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 VAV3Q9UKW4 847 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 MYH3P11055 1940 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 LTBP1Q14766 1721 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 USP34Q70CQ2 3546 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 CFAP73A6NFT4 308 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 CCDC22O60826 627 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 PDE5AO76074 875 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 SLC25A27O95847 323 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 RPA3P35244 121 aaPredicted RBP9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 NUDT2P50583 147 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 CAPSQ13938 189 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 FUT11Q495W5 492 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 SDHAF4Q5VUM1 108 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 AP1ARQ63HQ0 302 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 KCNV1Q6PIU1 500 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 KCNT2Q6UVM3 1135 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 PTAR1Q7Z6K3 402 aaPredicted RBP9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 DEFB106AQ8N104 65 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 COLGALT1Q8NBJ5 622 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 EXD1Q8NHP7 514 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 JOSD2Q8TAC2 188 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 SENP1Q9P0U3 644 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 UTRNP46939 3433 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 ASCC3Q8N3C0 2202 aaKnown RBP9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 WDR27A2RRH5 827 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 C2orf71A6NGG8 1288 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 PDHXO00330 501 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 CLDN5O00501 218 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 FANCGO15287 622 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 SH3BGRLO75368 114 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 PGK1P00558 417 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 ITGB6P18564 788 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 CHRM3P20309 590 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 MGAT1P26572 445 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 SERPINB3P29508 390 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 EPHX2P34913 555 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 VCPP55072 806 aaKnown RBP9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 AP2B1P63010 937 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 DDX39BQ13838 428 aaKnown RBP9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 MFSD14CQ5VZR4 134 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 TMEM154Q6P9G4 183 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 STRA8Q7Z7C7 330 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 ZNF677Q86XU0 584 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 ADGRF2Q8IZF7 708 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.41□□□□□ -0.93e-7■■■■■ 27
SMARCA1-202ENST00000371122 DACT3Q96B18 629 aaPredicted RBP9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 SGIP1Q9BQI5 828 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 CNPY3Q9BT09 278 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 ZC3H4Q9UPT8 1303 aaKnown RBP9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 ATP8B3O60423 1300 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 A0A1W2PPM1 405 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 XPO1O14980 1071 aaKnown RBP9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 ZNF862O60290 1169 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 IL18RAPO95256 599 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 SETSIPP0DME0 302 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 VDRP11473 427 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 NQO1P15559 274 aaKnown RBP9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 ZFXP17010 805 aaPredicted RBP9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 TSPAN8P19075 237 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 ATICP31939 592 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 KPNA2P52292 529 aaKnown RBP9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 KCNJ2P63252 427 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 MAMLD1Q13495 774 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 THEMIS2Q5TEJ8 643 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 CXCL17Q6UXB2 119 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 SLFN11Q7Z7L1 901 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 CACUL1Q86Y37 369 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 LPPQ93052 612 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 LENG1Q96BZ8 264 aaPredicted RBP9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 GRAMD1AQ96CP6 724 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 TUBB6Q9BUF5 446 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 PRR23AA6NEV1 266 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 PHGDHO43175 533 aaKnown RBP9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 PARNO95453 639 aaKnown RBP9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 CYP3A4P08684 503 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 F7P08709 466 aaPredicted RBP9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 FGRP09769 529 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 PIRTP0C851 137 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 MSX2P35548 267 aaPredicted RBP9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 PDK1Q15118 436 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 GRIK4Q16099 956 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 RBBP7Q16576 425 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 FBXO47Q5MNV8 452 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 GLB1LQ6UWU2 654 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 SYDE1Q6ZW31 735 aaPredicted RBP9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 MIER2Q8N344 545 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 ING2Q9H160 280 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 MUC3BQ9H195 1237 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 CASS4Q9NQ75 786 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 DDX43Q9NXZ2 648 aaKnown RBP9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 ERI2A8K979 691 aaKnown RBP9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 PIK3CDO00329 1044 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms