RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W GIS2P53849 153 aaKnown RBP RIP-Chip data1.48□□□□□ -2.17not detected
SEC16YPL085W YOR034C-AQ3E735 80 aa1.48□□□□□ -2.17
SEC16YPL085W QCR10P37299 77 aa1.48□□□□□ -2.17
SEC16YPL085W ATP17Q06405 101 aa1.48□□□□□ -2.17
SEC16YPL085W SLH1P53327 1967 aaKnown RBP1.46□□□□□ -2.17
SEC16YPL085W YMR001C-AQ8TGS9 76 aa1.46□□□□□ -2.18
SEC16YPL085W HHY1P39982 102 aa1.46□□□□□ -2.18
SEC16YPL085W TRA1P38811 3744 aa1.46□□□□□ -2.18
SEC16YPL085W YBR056W-AI2HB52 66 aa1.46□□□□□ -2.18
SEC16YPL085W YER188C-AP0C0V2 99 aa1.46□□□□□ -2.18
SEC16YPL085W TOM1Q03280 3268 aa1.46□□□□□ -2.18
SEC16YPL085W YHR007C-AQ07074 71 aa1.45□□□□□ -2.18
SEC16YPL085W YFR032C-BQ8TGU2 87 aa1.45□□□□□ -2.18
SEC16YPL085W YOR376W-AQ3E805 51 aa1.45□□□□□ -2.18
SEC16YPL085W YLR361C-AQ3E795 98 aa1.44□□□□□ -2.18
SEC16YPL085W YBL044WP38194 122 aa1.44□□□□□ -2.18
SEC16YPL085W RPL37BP51402 88 aaKnown RBP1.44□□□□□ -2.18
SEC16YPL085W YPL080CQ02826 108 aa1.44□□□□□ -2.18
SEC16YPL085W YBL008W-AQ3E821 79 aa1.44□□□□□ -2.18
SEC16YPL085W YEL014CP39999 101 aa1.43□□□□□ -2.18
SEC16YPL085W STT4P37297 1900 aa1.43□□□□□ -2.18
SEC16YPL085W TEL1P38110 2787 aa1.43□□□□□ -2.18
SEC16YPL085W RPS29AP41057 56 aaKnown RBP1.41□□□□□ -2.18
SEC16YPL085W YHR050W-AQ05451 56 aa1.41□□□□□ -2.18
SEC16YPL085W YAL067W-AQ8TGK6 75 aa1.41□□□□□ -2.18
SEC16YPL085W SEC16P48415 2195 aaKnown RBP1.41□□□□□ -2.18
SEC16YPL085W YBR072C-AQ3E794 53 aa1.41□□□□□ -2.18
SEC16YPL085W YDR010CQ12426 110 aa1.41□□□□□ -2.18
SEC16YPL085W RRT15Q3E811 62 aa1.4□□□□□ -2.18
SEC16YPL085W YBR016WP38216 128 aa1.4□□□□□ -2.19
SEC16YPL085W YBR027CP38220 110 aa1.4□□□□□ -2.19
SEC16YPL085W YHR032W-AP0C5N6 59 aa1.39□□□□□ -2.19
SEC16YPL085W NOP10Q6Q547 58 aaPredicted RBP1.39□□□□□ -2.19
SEC16YPL085W RPS30AP0CX33 63 aaKnown RBP1.38□□□□□ -2.19
SEC16YPL085W RPS30BP0CX34 63 aaKnown RBP1.38□□□□□ -2.19
SEC16YPL085W BLM10P43583 2143 aa1.38□□□□□ -2.19
SEC16YPL085W YMR122CQ03879 124 aa1.38□□□□□ -2.19
SEC16YPL085W RPS29BP41058 56 aaKnown RBP1.38□□□□□ -2.19
SEC16YPL085W YDL012CQ12489 107 aa1.38□□□□□ -2.19
SEC16YPL085W YPR195CQ06594 109 aa1.37□□□□□ -2.19
SEC16YPL085W YOL164W-AQ3E7A5 60 aa1.37□□□□□ -2.19
SEC16YPL085W YOL166W-AQ8TGJ1 51 aa1.37□□□□□ -2.19
SEC16YPL085W SOM1Q05676 74 aa1.36□□□□□ -2.19
SEC16YPL085W YDR210WQ03482 75 aa1.36□□□□□ -2.19
SEC16YPL085W CCH1P50077 2039 aa1.36□□□□□ -2.19
SEC16YPL085W UBR1P19812 1950 aa1.35□□□□□ -2.19
SEC16YPL085W YDR246W-AQ3E763 66 aa1.35□□□□□ -2.19
SEC16YPL085W YOR394C-AQ8TGJ0 55 aa1.35□□□□□ -2.19
SEC16YPL085W YGL014C-AP0C5N1 53 aa1.34□□□□□ -2.19
SEC16YPL085W GLT1Q12680 2145 aaKnown RBP1.33□□□□□ -2.2
SEC16YPL085W CYR1P08678 2026 aaKnown RBP1.32□□□□□ -2.2
SEC16YPL085W YLR157W-EP0CF00 54 aa1.31□□□□□ -2.2
SEC16YPL085W YML100W-AQ8TGT0 57 aa1.31□□□□□ -2.2
SEC16YPL085W RPL37AP49166 88 aaKnown RBP1.29□□□□□ -2.2
SEC16YPL085W YJR128WP47162 119 aa1.29□□□□□ -2.2
SEC16YPL085W DYN1P36022 4092 aa1.29□□□□□ -2.2
SEC16YPL085W NUM1Q00402 2748 aa1.27□□□□□ -2.21
SEC16YPL085W VPS13Q07878 3144 aa1.23□□□□□ -2.21
SEC16YPL085W YCR108CQ3E819 63 aa1.17□□□□□ -2.22
SEC16YPL085W IRA1P18963 3092 aa1.1□□□□□ -2.23
SEC16YPL085W CSF1Q12150 2958 aa1.04□□□□□ -2.24
SEC16YPL085W YHR086W-AQ3E746 53 aa1.04□□□□□ -2.24
SEC16YPL085W IRA2P19158 3079 aa0.97□□□□□ -2.25
Retrieved 63 of 5,963 RNA–protein pairs in 7.5 ms