RNA–Protein interactions for RNA: YOR343W-B

YOR343W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YOR343W-B, Length 5,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOR343W-BYOR343W-B RPS30AP0CX33 63 aaKnown RBP0.55□□□□□ -2.32
YOR343W-BYOR343W-B RPS30BP0CX34 63 aaKnown RBP0.55□□□□□ -2.32
YOR343W-BYOR343W-B YHR050W-AQ05451 56 aa0.55□□□□□ -2.32
YOR343W-BYOR343W-B YIL102C-AQ2V2P5 75 aa0.55□□□□□ -2.32
YOR343W-BYOR343W-B YDL022C-AP0C5L6 82 aa0.55□□□□□ -2.32
YOR343W-BYOR343W-B YBR230W-AQ3E762 66 aa0.54□□□□□ -2.32
YOR343W-BYOR343W-B YOR072W-BQ3E832 53 aa0.54□□□□□ -2.32
YOR343W-BYOR343W-B YOR192C-CQ3E736 78 aa0.53□□□□□ -2.32
YOR343W-BYOR343W-B ERI1P62651 68 aaKnown RBP0.52□□□□□ -2.33
YOR343W-BYOR343W-B VPS13Q07878 3144 aa0.52□□□□□ -2.33
YOR343W-BYOR343W-B YMR175W-AQ3E766 64 aa0.52□□□□□ -2.33
YOR343W-BYOR343W-B YGR121W-AQ3E816 71 aa0.5□□□□□ -2.33
YOR343W-BYOR343W-B YGR146C-AQ8TGT9 53 aa0.5□□□□□ -2.33
YOR343W-BYOR343W-B YGR035W-AQ45U48 73 aa0.48□□□□□ -2.33
YOR343W-BYOR343W-B TOM1Q03280 3268 aa0.48□□□□□ -2.33
YOR343W-BYOR343W-B YBR056W-AI2HB52 66 aa0.46□□□□□ -2.34
YOR343W-BYOR343W-B RPS29AP41057 56 aaKnown RBP0.46□□□□□ -2.34
YOR343W-BYOR343W-B UTP20P35194 2493 aaKnown RBP0.46□□□□□ -2.34
YOR343W-BYOR343W-B IRA1P18963 3092 aa0.45□□□□□ -2.34
YOR343W-BYOR343W-B SPI1P40092 148 aa0.45□□□□□ -2.34
YOR343W-BYOR343W-B YDR524C-BQ3E6R4 66 aa0.45□□□□□ -2.34
YOR343W-BYOR343W-B RPS27AP35997 82 aaKnown RBP0.44□□□□□ -2.34
YOR343W-BYOR343W-B VMA9Q3E7B6 73 aa0.44□□□□□ -2.34
YOR343W-BYOR343W-B TOR1P35169 2470 aa0.43□□□□□ -2.34
YOR343W-BYOR343W-B CSF1Q12150 2958 aa0.42□□□□□ -2.34
YOR343W-BYOR343W-B MDN1Q12019 4910 aaKnown RBP0.4□□□□□ -2.34
YOR343W-BYOR343W-B IRA2P19158 3079 aa0.4□□□□□ -2.35
YOR343W-BYOR343W-B COX9P07255 59 aa0.37□□□□□ -2.35
YOR343W-BYOR343W-B YML054C-AQ3E809 52 aa0.35□□□□□ -2.35
YOR343W-BYOR343W-B YPR010C-AA5Z2X5 72 aa0.34□□□□□ -2.35
YOR343W-BYOR343W-B YFR010W-AP0C5N0 62 aa0.32□□□□□ -2.36
YOR343W-BYOR343W-B RPS27BP38711 82 aa0.32□□□□□ -2.36
YOR343W-BYOR343W-B Q0017Q9ZZX8 53 aa0.31□□□□□ -2.36
YOR343W-BYOR343W-B MEC1P38111 2368 aa0.3□□□□□ -2.36
YOR343W-BYOR343W-B YOL166W-AQ8TGJ1 51 aa0.3□□□□□ -2.36
YOR343W-BYOR343W-B YDR034C-AP0C289 58 aa0.28□□□□□ -2.36
YOR343W-BYOR343W-B SMX2P40204 77 aaKnown RBP0.28□□□□□ -2.36
YOR343W-BYOR343W-B YKL023C-AQ2V2P3 75 aa0.28□□□□□ -2.37
YOR343W-BYOR343W-B YOR316C-AQ3E806 69 aa0.27□□□□□ -2.37
YOR343W-BYOR343W-B RPL29P05747 59 aaPredicted RBP0.26□□□□□ -2.37
YOR343W-BYOR343W-B YJL133C-AQ3E7A3 74 aa0.24□□□□□ -2.37
YOR343W-BYOR343W-B YPR117WQ06116 2489 aa0.22□□□□□ -2.37
YOR343W-BYOR343W-B DDR2P89113 61 aa0.22□□□□□ -2.37
YOR343W-BYOR343W-B YLR342W-AQ3E810 57 aa0.21□□□□□ -2.38
YOR343W-BYOR343W-B YMR105W-AQ8TGS8 64 aa0.2□□□□□ -2.38
YOR343W-BYOR343W-B TOR2P32600 2474 aaKnown RBP0.18□□□□□ -2.38
YOR343W-BYOR343W-B PMP3P87284 55 aa0.18□□□□□ -2.38
YOR343W-BYOR343W-B YIL046W-AQ3E7Z4 54 aa0.17□□□□□ -2.38
YOR343W-BYOR343W-B YJL127C-BQ3E828 52 aa0.16□□□□□ -2.38
YOR343W-BYOR343W-B YDR034W-BQ6Q5X2 51 aa0.12□□□□□ -2.39
YOR343W-BYOR343W-B YLL066W-BQ8TGJ7 56 aa0.11□□□□□ -2.39
YOR343W-BYOR343W-B NUM1Q00402 2748 aa0.11□□□□□ -2.39
YOR343W-BYOR343W-B TEL1P38110 2787 aa0.1□□□□□ -2.39
YOR343W-BYOR343W-B YHR073W-AP0C5N7 58 aa0.09□□□□□ -2.4
YOR343W-BYOR343W-B NCE101Q02820 53 aa0.08□□□□□ -2.4
YOR343W-BYOR343W-B HOR7Q05827 59 aa0.05□□□□□ -2.4
YOR343W-BYOR343W-B CUP1-1P0CX80 61 aa0.05□□□□□ -2.4
YOR343W-BYOR343W-B CUP1-2P0CX81 61 aa0.05□□□□□ -2.4
YOR343W-BYOR343W-B GCN1P33892 2672 aaKnown RBP0.03□□□□□ -2.4
YOR343W-BYOR343W-B TOM7P53507 60 aa0.02□□□□□ -2.41
YOR343W-BYOR343W-B FMP27Q06179 2628 aa0.01□□□□□ -2.41
YOR343W-BYOR343W-B Q0297Q9ZZV8 51 aa-0□□□□□ -2.41
YOR343W-BYOR343W-B RPL39P04650 51 aa-0.07□□□□□ -2.42
Retrieved 63 of 5,963 RNA–protein pairs in 10.3 ms