RNA–Protein interactions for RNA: YNL232W

CSL4, Transcript of Exosome non-catalytic core component, yeast

Gene CSL4, Length 879 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSL4	YNL232W	COA3	Q3E7B2	85 aa		3.13	□□□□□ -1.91
CSL4	YNL232W	RPL29	P05747	59 aa	Predicted RBP	3.08	□□□□□ -1.92
CSL4	YNL232W	YLL006W-A	Q3E814	58 aa		3.08	□□□□□ -1.92
CSL4	YNL232W	YNL122C	P53921	115 aa	Predicted RBP	3.07	□□□□□ -1.92
CSL4	YNL232W	YDL012C	Q12489	107 aa		3.07	□□□□□ -1.92
CSL4	YNL232W	YNL190W	P53872	204 aa		3.06	□□□□□ -1.92
CSL4	YNL232W	YNL042W-B	Q3E7Z2	85 aa		3.06	□□□□□ -1.92
CSL4	YNL232W	DSE2	P38844	325 aa		3.05	□□□□□ -1.92
CSL4	YNL232W	YIL156W-B	Q2V2P4	73 aa		3.05	□□□□□ -1.92
CSL4	YNL232W	NOP10	Q6Q547	58 aa	Predicted RBP	3.05	□□□□□ -1.92
CSL4	YNL232W	YDR246W-A	Q3E763	66 aa		3.04	□□□□□ -1.92
CSL4	YNL232W	YBR230W-A	Q3E762	66 aa		3.01	□□□□□ -1.93
CSL4	YNL232W	YDL022C-A	P0C5L6	82 aa		3	□□□□□ -1.93
CSL4	YNL232W	MRPS12	P53732	153 aa		3	□□□□□ -1.93
CSL4	YNL232W	YDR210W	Q03482	75 aa		3	□□□□□ -1.93
CSL4	YNL232W	YDR182W-A	Q3E796	67 aa		2.99	□□□□□ -1.93
CSL4	YNL232W	YJL127C-B	Q3E828	52 aa		2.99	□□□□□ -1.93
CSL4	YNL232W	COX7	P10174	60 aa		2.98	□□□□□ -1.93
CSL4	YNL232W	YOR072W	Q08486	104 aa		2.96	□□□□□ -1.94
CSL4	YNL232W	ATP17	Q06405	101 aa		2.94	□□□□□ -1.94
CSL4	YNL232W	HUB1	Q6Q546	73 aa		2.94	□□□□□ -1.94
CSL4	YNL232W	RPS30A	P0CX33	63 aa	Known RBP	2.93	□□□□□ -1.94
CSL4	YNL232W	RPS30B	P0CX34	63 aa	Known RBP	2.93	□□□□□ -1.94
CSL4	YNL232W	YOR034C-A	Q3E735	80 aa		2.93	□□□□□ -1.94
CSL4	YNL232W	EDC1	P53080	175 aa	Predicted RBP	2.91	□□□□□ -1.94
CSL4	YNL232W	YJL009W	P47078	108 aa		2.89	□□□□□ -1.95
CSL4	YNL232W	Q0017	Q9ZZX8	53 aa		2.88	□□□□□ -1.95
CSL4	YNL232W	YLR255C	O13574	117 aa		2.87	□□□□□ -1.95
CSL4	YNL232W	YBR201C-A	Q2V2Q3	67 aa		2.87	□□□□□ -1.95
CSL4	YNL232W	RPS29A	P41057	56 aa	Known RBP	2.86	□□□□□ -1.95
CSL4	YNL232W	ATP18	P81450	59 aa		2.85	□□□□□ -1.95
CSL4	YNL232W	YOL097W-A	Q3E7Y9	61 aa		2.85	□□□□□ -1.95
CSL4	YNL232W	YOL166W-A	Q8TGJ1	51 aa		2.85	□□□□□ -1.95
CSL4	YNL232W	YJR128W	P47162	119 aa		2.83	□□□□□ -1.96
CSL4	YNL232W	SDH6	Q3E785	79 aa		2.83	□□□□□ -1.96
CSL4	YNL232W	YLR157W-D	P0CE99	70 aa		2.81	□□□□□ -1.96
CSL4	YNL232W	RPS29B	P41058	56 aa	Known RBP	2.79	□□□□□ -1.96
CSL4	YNL232W	YJR107C-A	P0CT86	78 aa		2.76	□□□□□ -1.97
CSL4	YNL232W	YMR001C-A	Q8TGS9	76 aa		2.76	□□□□□ -1.97
CSL4	YNL232W	YIL102C	P40488	101 aa		2.73	□□□□□ -1.97
CSL4	YNL232W	YHR086W-A	Q3E746	53 aa		2.72	□□□□□ -1.97
CSL4	YNL232W	YAR064W	P39563	99 aa		2.69	□□□□□ -1.98
CSL4	YNL232W	RPL38	P49167	78 aa	Known RBP	2.68	□□□□□ -1.98
CSL4	YNL232W	YOL013W-A	P0C272	63 aa	Predicted RBP	2.67	□□□□□ -1.98
CSL4	YNL232W	YHR073W-A	P0C5N7	58 aa		2.62	□□□□□ -1.99
CSL4	YNL232W	YHR213W-B	Q8TGK1	99 aa		2.62	□□□□□ -1.99
CSL4	YNL232W	HHY1	P39982	102 aa		2.61	□□□□□ -1.99
CSL4	YNL232W	YJL133C-A	Q3E7A3	74 aa		2.6	□□□□□ -1.99
CSL4	YNL232W	OLI1	P61829	76 aa		2.59	□□□□□ -1.99
CSL4	YNL232W	YBR072C-A	Q3E794	53 aa		2.58	□□□□□ -2
CSL4	YNL232W	YOR394C-A	Q8TGJ0	55 aa		2.58	□□□□□ -2
CSL4	YNL232W	YFR009W-A	P0C5M9	85 aa		2.55	□□□□□ -2
CSL4	YNL232W	YBR016W	P38216	128 aa		2.54	□□□□□ -2
CSL4	YNL232W	YOR316C-A	Q3E806	69 aa		2.53	□□□□□ -2
CSL4	YNL232W	RPL37A	P49166	88 aa	Known RBP	2.44	□□□□□ -2.02
CSL4	YNL232W	YML054C-A	Q3E809	52 aa		2.42	□□□□□ -2.02
CSL4	YNL232W	YBL044W	P38194	122 aa		2.38	□□□□□ -2.03
CSL4	YNL232W	YCR108C	Q3E819	63 aa		2.33	□□□□□ -2.04
CSL4	YNL232W	YGR146C-A	Q8TGT9	53 aa		2.32	□□□□□ -2.04
CSL4	YNL232W	YOL164W-A	Q3E7A5	60 aa		2.28	□□□□□ -2.04
CSL4	YNL232W	YLR157W-E	P0CF00	54 aa		2.22	□□□□□ -2.05
CSL4	YNL232W	YOR072W-B	Q3E832	53 aa		2.1	□□□□□ -2.07
CSL4	YNL232W	YHR050W-A	Q05451	56 aa		1.59	□□□□□ -2.15

Retrieved 63 of 5,963 RNA–protein pairs in 53.2 ms