RNA–Protein interactions for RNA: YMR224C

MRE11, Transcript of Nuclease subunit of the MRX complex with Rad50p and Xrs2p, yeastyeast

Gene MRE11, Length 2,079 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MRE11YMR224C YDR182W-AQ3E796 67 aa1.54□□□□□ -2.16
MRE11YMR224C RPS30AP0CX33 63 aaKnown RBP1.54□□□□□ -2.16
MRE11YMR224C RPS30BP0CX34 63 aaKnown RBP1.54□□□□□ -2.16
MRE11YMR224C VMA9Q3E7B6 73 aa1.54□□□□□ -2.16
MRE11YMR224C IRA2P19158 3079 aa1.52□□□□□ -2.17
MRE11YMR224C FKS3Q04952 1785 aa1.51□□□□□ -2.17
MRE11YMR224C IRA1P18963 3092 aa1.51□□□□□ -2.17
MRE11YMR224C YOR011W-AQ3E807 68 aa1.51□□□□□ -2.17
MRE11YMR224C NUP192P47054 1683 aa1.5□□□□□ -2.17
MRE11YMR224C RPS27AP35997 82 aaKnown RBP1.48□□□□□ -2.17
MRE11YMR224C YOR394C-AQ8TGJ0 55 aa1.47□□□□□ -2.17
MRE11YMR224C YGR025WP53216 100 aa1.46□□□□□ -2.18
MRE11YMR224C OLI1P61829 76 aa1.46□□□□□ -2.18
MRE11YMR224C MEC1P38111 2368 aa1.46□□□□□ -2.18
MRE11YMR224C YBL044WP38194 122 aa1.46□□□□□ -2.18
MRE11YMR224C MDN1Q12019 4910 aaKnown RBP1.46□□□□□ -2.18
MRE11YMR224C FIG2P25653 1609 aa1.41□□□□□ -2.18
MRE11YMR224C YBR056W-AI2HB52 66 aa1.39□□□□□ -2.19
MRE11YMR224C YOL166W-AQ8TGJ1 51 aa1.39□□□□□ -2.19
MRE11YMR224C CSF1Q12150 2958 aa1.38□□□□□ -2.19
MRE11YMR224C YMR001C-AQ8TGS9 76 aa1.35□□□□□ -2.19
MRE11YMR224C YOR192C-CQ3E736 78 aa1.34□□□□□ -2.19
MRE11YMR224C YCR108CQ3E819 63 aa1.31□□□□□ -2.2
MRE11YMR224C YLR157W-DP0CE99 70 aa1.31□□□□□ -2.2
MRE11YMR224C SIP18P50263 79 aa1.31□□□□□ -2.2
MRE11YMR224C FLO1P32768 1537 aa1.3□□□□□ -2.2
MRE11YMR224C DYN1P36022 4092 aa1.26□□□□□ -2.21
MRE11YMR224C YKL023C-AQ2V2P3 75 aa1.25□□□□□ -2.21
MRE11YMR224C YBR230W-AQ3E762 66 aa1.19□□□□□ -2.22
MRE11YMR224C YOR008C-AQ3E7B9 74 aa1.19□□□□□ -2.22
MRE11YMR224C RPS27BP38711 82 aa1.17□□□□□ -2.22
MRE11YMR224C TRA1P38811 3744 aa1.17□□□□□ -2.22
MRE11YMR224C YDR524C-BQ3E6R4 66 aa1.17□□□□□ -2.22
MRE11YMR224C TOS6P48560 102 aa1.13□□□□□ -2.23
MRE11YMR224C SMX2P40204 77 aaKnown RBP1.09□□□□□ -2.23
MRE11YMR224C YGR146C-AQ8TGT9 53 aa1.05□□□□□ -2.24
MRE11YMR224C YIL046W-AQ3E7Z4 54 aa1.03□□□□□ -2.24
MRE11YMR224C YPR010C-AA5Z2X5 72 aa1□□□□□ -2.25
MRE11YMR224C NCE101Q02820 53 aa0.97□□□□□ -2.25
MRE11YMR224C COX9P07255 59 aa0.92□□□□□ -2.26
MRE11YMR224C RPS29AP41057 56 aaKnown RBP0.92□□□□□ -2.26
MRE11YMR224C RPL39P04650 51 aa0.9□□□□□ -2.26
MRE11YMR224C YMR105W-AQ8TGS8 64 aa0.89□□□□□ -2.27
MRE11YMR224C Q0297Q9ZZV8 51 aa0.88□□□□□ -2.27
MRE11YMR224C YLL006W-AQ3E814 58 aa0.87□□□□□ -2.27
MRE11YMR224C COA2Q3E823 68 aa0.87□□□□□ -2.27
MRE11YMR224C YGL258W-AQ3E740 77 aa0.85□□□□□ -2.27
MRE11YMR224C TOM7P53507 60 aa0.84□□□□□ -2.28
MRE11YMR224C HOR7Q05827 59 aa0.83□□□□□ -2.28
MRE11YMR224C YLR342W-AQ3E810 57 aa0.79□□□□□ -2.28
MRE11YMR224C PMP3P87284 55 aa0.76□□□□□ -2.29
MRE11YMR224C YLL066W-BQ8TGJ7 56 aa0.75□□□□□ -2.29
MRE11YMR224C YDR034C-AP0C289 58 aa0.73□□□□□ -2.29
MRE11YMR224C YOR072W-BQ3E832 53 aa0.73□□□□□ -2.29
MRE11YMR224C RPL29P05747 59 aaPredicted RBP0.69□□□□□ -2.3
MRE11YMR224C YJL127C-BQ3E828 52 aa0.69□□□□□ -2.3
MRE11YMR224C DDR2P89113 61 aa0.68□□□□□ -2.3
MRE11YMR224C YJL133C-AQ3E7A3 74 aa0.66□□□□□ -2.3
MRE11YMR224C YOR316C-AQ3E806 69 aa0.61□□□□□ -2.31
MRE11YMR224C YHR073W-AP0C5N7 58 aa0.6□□□□□ -2.31
MRE11YMR224C Q0017Q9ZZX8 53 aa0.55□□□□□ -2.32
MRE11YMR224C YML054C-AQ3E809 52 aa0.52□□□□□ -2.33
MRE11YMR224C YHR050W-AQ05451 56 aa0.43□□□□□ -2.34
Retrieved 63 of 5,963 RNA–protein pairs in 38.7 ms