RNA–Protein interactions for RNA: YLR440C

SEC39, Transcript of Component of the Dsl1p tethering complex, yeastyeast

Gene SEC39, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC39YLR440C YHR007C-AQ07074 71 aa3.29□□□□□ -1.88
SEC39YLR440C YDR114CQ04597 100 aa3.29□□□□□ -1.88
SEC39YLR440C YGR240C-AQ3E786 66 aa3.29□□□□□ -1.88
SEC39YLR440C YJR146WP47174 117 aa3.28□□□□□ -1.88
SEC39YLR440C MVB12P42939 101 aa3.28□□□□□ -1.89
SEC39YLR440C VAM10Q08474 114 aa3.28□□□□□ -1.89
SEC39YLR440C YDL012CQ12489 107 aa3.28□□□□□ -1.89
SEC39YLR440C YLR255CO13574 117 aa3.27□□□□□ -1.89
SEC39YLR440C MDN1Q12019 4910 aaKnown RBP3.27□□□□□ -1.89
SEC39YLR440C URA2P07259 2214 aaKnown RBP3.26□□□□□ -1.89
SEC39YLR440C YGR025WP53216 100 aa3.24□□□□□ -1.89
SEC39YLR440C TAR1Q8TGM6 124 aa3.24□□□□□ -1.89
SEC39YLR440C RPL39P04650 51 aa3.23□□□□□ -1.89
SEC39YLR440C YOR011W-AQ3E807 68 aa3.22□□□□□ -1.89
SEC39YLR440C YBR200W-AQ3E755 54 aa3.22□□□□□ -1.89
SEC39YLR440C YLL006W-AQ3E814 58 aa3.21□□□□□ -1.9
SEC39YLR440C AUA1P32450 94 aa3.2□□□□□ -1.9
SEC39YLR440C YHR213W-BQ8TGK1 99 aa3.2□□□□□ -1.9
SEC39YLR440C YOR072WQ08486 104 aa3.2□□□□□ -1.9
SEC39YLR440C COX7P10174 60 aa3.18□□□□□ -1.9
SEC39YLR440C YJL133C-AQ3E7A3 74 aa3.17□□□□□ -1.9
SEC39YLR440C YMR105W-AQ8TGS8 64 aa3.17□□□□□ -1.9
SEC39YLR440C YBR230W-AQ3E762 66 aa3.14□□□□□ -1.91
SEC39YLR440C LCL1Q02786 101 aa3.13□□□□□ -1.91
SEC39YLR440C YJR128WP47162 119 aa3.13□□□□□ -1.91
SEC39YLR440C YLR307C-AQ3E825 87 aa3.13□□□□□ -1.91
SEC39YLR440C YOR394C-AQ8TGJ0 55 aa3.12□□□□□ -1.91
SEC39YLR440C YAR064WP39563 99 aa3.11□□□□□ -1.91
SEC39YLR440C YJL009WP47078 108 aa3.11□□□□□ -1.91
SEC39YLR440C RPL29P05747 59 aaPredicted RBP3.1□□□□□ -1.91
SEC39YLR440C RDS3Q06835 107 aaPredicted RBP3.1□□□□□ -1.91
SEC39YLR440C DDR2P89113 61 aa3.05□□□□□ -1.92
SEC39YLR440C GIS2P53849 153 aaKnown RBP RIP-Chip data3.05□□□□□ -1.92not detected
SEC39YLR440C OLI1P61829 76 aa3.05□□□□□ -1.92
SEC39YLR440C HOR7Q05827 59 aa3.04□□□□□ -1.92
SEC39YLR440C YNL162W-AQ3E7A8 72 aa3.04□□□□□ -1.92
SEC39YLR440C YJL127C-BQ3E828 52 aa3.04□□□□□ -1.92
SEC39YLR440C YHR212W-AP0CX91 67 aa3.03□□□□□ -1.92
SEC39YLR440C PMP3P87284 55 aa2.99□□□□□ -1.93
SEC39YLR440C YNL146C-AQ3E7Z1 64 aa2.99□□□□□ -1.93
SEC39YLR440C RPC10P40422 70 aa2.97□□□□□ -1.93
SEC39YLR440C YCR108CQ3E819 63 aa2.97□□□□□ -1.93
SEC39YLR440C YGR146C-AQ8TGT9 53 aa2.96□□□□□ -1.93
SEC39YLR440C YBL044WP38194 122 aa2.95□□□□□ -1.94
SEC39YLR440C RPL37BP51402 88 aaKnown RBP2.92□□□□□ -1.94
SEC39YLR440C YMR230W-AQ3E7B5 62 aa2.9□□□□□ -1.94
SEC39YLR440C YBR016WP38216 128 aa2.86□□□□□ -1.95
SEC39YLR440C YBR072C-AQ3E794 53 aa2.86□□□□□ -1.95
SEC39YLR440C HHY1P39982 102 aa2.84□□□□□ -1.96
SEC39YLR440C YOR316C-AQ3E806 69 aa2.83□□□□□ -1.96
SEC39YLR440C YHR086W-AQ3E746 53 aa2.76□□□□□ -1.97
SEC39YLR440C YHR073W-AP0C5N7 58 aa2.74□□□□□ -1.97
SEC39YLR440C YLL066W-BQ8TGJ7 56 aa2.66□□□□□ -1.98
SEC39YLR440C RPL37AP49166 88 aaKnown RBP2.64□□□□□ -1.99
SEC39YLR440C YOR072W-BQ3E832 53 aa2.63□□□□□ -1.99
SEC39YLR440C YDR034C-AP0C289 58 aa2.6□□□□□ -1.99
SEC39YLR440C YOL164W-AQ3E7A5 60 aa2.52□□□□□ -2.01
SEC39YLR440C YLR157W-EP0CF00 54 aa2.38□□□□□ -2.03
SEC39YLR440C YML054C-AQ3E809 52 aa2.22□□□□□ -2.05
SEC39YLR440C Q0017Q9ZZX8 53 aa2.11□□□□□ -2.07
SEC39YLR440C RPS29BP41058 56 aaKnown RBP2.03□□□□□ -2.08
SEC39YLR440C RPS29AP41057 56 aaKnown RBP2.03□□□□□ -2.08
SEC39YLR440C YHR050W-AQ05451 56 aa2.02□□□□□ -2.09
Retrieved 63 of 5,963 RNA–protein pairs in 161.8 ms