RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W Q0297Q9ZZV8 51 aa2.46□□□□□ -2.02
VPS36YLR417W YEL014CP39999 101 aa2.45□□□□□ -2.02
VPS36YLR417W CMC4Q3E7A9 73 aa2.45□□□□□ -2.02
VPS36YLR417W YOL097W-AQ3E7Y9 61 aa2.45□□□□□ -2.02
VPS36YLR417W YJL197C-AP0C5P0 93 aa2.44□□□□□ -2.02
VPS36YLR417W MRX7P53869 86 aa2.44□□□□□ -2.02
VPS36YLR417W YNL122CP53921 115 aaPredicted RBP2.44□□□□□ -2.02
VPS36YLR417W YDR010CQ12426 110 aa2.44□□□□□ -2.02
VPS36YLR417W YIL156W-BQ2V2P4 73 aa2.44□□□□□ -2.02
VPS36YLR417W YLL066W-BQ8TGJ7 56 aa2.44□□□□□ -2.02
VPS36YLR417W URA2P07259 2214 aaKnown RBP2.42□□□□□ -2.02
VPS36YLR417W VPS13Q07878 3144 aa2.42□□□□□ -2.02
VPS36YLR417W YBR201C-AQ2V2Q3 67 aa2.4□□□□□ -2.02
VPS36YLR417W YGR146C-AQ8TGT9 53 aa2.4□□□□□ -2.02
VPS36YLR417W FMP27Q06179 2628 aa2.38□□□□□ -2.03
VPS36YLR417W CSF1Q12150 2958 aa2.38□□□□□ -2.03
VPS36YLR417W LCL2Q08045 131 aa2.38□□□□□ -2.03
VPS36YLR417W YHR073W-AP0C5N7 58 aa2.37□□□□□ -2.03
VPS36YLR417W YLR255CO13574 117 aa2.37□□□□□ -2.03
VPS36YLR417W IRA2P19158 3079 aa2.36□□□□□ -2.03
VPS36YLR417W YGL014C-AP0C5N1 53 aa2.34□□□□□ -2.03
VPS36YLR417W YJR128WP47162 119 aa2.34□□□□□ -2.03
VPS36YLR417W YOR316C-AQ3E806 69 aa2.32□□□□□ -2.04
VPS36YLR417W YDR034C-AP0C289 58 aa2.31□□□□□ -2.04
VPS36YLR417W OLI1P61829 76 aa2.31□□□□□ -2.04
VPS36YLR417W RPL37BP51402 88 aaKnown RBP2.31□□□□□ -2.04
VPS36YLR417W GCN1P33892 2672 aaKnown RBP2.3□□□□□ -2.04
VPS36YLR417W YPR117WQ06116 2489 aa2.3□□□□□ -2.04
VPS36YLR417W LCL1Q02786 101 aa2.27□□□□□ -2.05
VPS36YLR417W RPL43AP0CX25 92 aaKnown RBP2.26□□□□□ -2.05
VPS36YLR417W RPL43BP0CX26 92 aa2.26□□□□□ -2.05
VPS36YLR417W COX7P10174 60 aa2.26□□□□□ -2.05
VPS36YLR417W YBR016WP38216 128 aa2.26□□□□□ -2.05
VPS36YLR417W YBR056W-AI2HB52 66 aa2.25□□□□□ -2.05
VPS36YLR417W YOR394C-AQ8TGJ0 55 aa2.25□□□□□ -2.05
VPS36YLR417W IRA1P18963 3092 aa2.25□□□□□ -2.05
VPS36YLR417W TRA1P38811 3744 aa2.21□□□□□ -2.06
VPS36YLR417W PRP8P33334 2413 aaKnown RBP2.2□□□□□ -2.06
VPS36YLR417W YBL044WP38194 122 aa2.19□□□□□ -2.06
VPS36YLR417W YCR108CQ3E819 63 aa2.19□□□□□ -2.06
VPS36YLR417W YDR210WQ03482 75 aa2.18□□□□□ -2.06
VPS36YLR417W TOR2P32600 2474 aaKnown RBP2.18□□□□□ -2.06
VPS36YLR417W UTP20P35194 2493 aaKnown RBP2.16□□□□□ -2.06
VPS36YLR417W RPL37AP49166 88 aaKnown RBP2.14□□□□□ -2.07
VPS36YLR417W YBR072C-AQ3E794 53 aa2.12□□□□□ -2.07
VPS36YLR417W MEC1P38111 2368 aa2.12□□□□□ -2.07
VPS36YLR417W YOR072W-BQ3E832 53 aa2.09□□□□□ -2.07
VPS36YLR417W YJL009WP47078 108 aa2.08□□□□□ -2.08
VPS36YLR417W TEL1P38110 2787 aa2.06□□□□□ -2.08
VPS36YLR417W YML054C-AQ3E809 52 aa2.06□□□□□ -2.08
VPS36YLR417W HHY1P39982 102 aa2.04□□□□□ -2.08
VPS36YLR417W Q0017Q9ZZX8 53 aa2.02□□□□□ -2.09
VPS36YLR417W NUM1Q00402 2748 aa1.98□□□□□ -2.09
VPS36YLR417W TOR1P35169 2470 aa1.96□□□□□ -2.09
VPS36YLR417W CUP1-1P0CX80 61 aa1.89□□□□□ -2.11
VPS36YLR417W CUP1-2P0CX81 61 aa1.89□□□□□ -2.11
VPS36YLR417W DYN1P36022 4092 aa1.84□□□□□ -2.12
VPS36YLR417W YHR050W-AQ05451 56 aa1.67□□□□□ -2.14
VPS36YLR417W YOL164W-AQ3E7A5 60 aa1.67□□□□□ -2.14
VPS36YLR417W YLR157W-EP0CF00 54 aa1.66□□□□□ -2.14
VPS36YLR417W RPS29AP41057 56 aaKnown RBP1.57□□□□□ -2.16
VPS36YLR417W RPS29BP41058 56 aaKnown RBP1.46□□□□□ -2.18
VPS36YLR417W MDN1Q12019 4910 aaKnown RBP1.45□□□□□ -2.18
Retrieved 63 of 5,963 RNA–protein pairs in 49 ms