RNA–Protein interactions for RNA: YKL197C

PEX1, Transcript of AAA-peroxin, yeastyeast

Gene PEX1, Length 3,132 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX1YKL197C CSF1Q12150 2958 aa2.16□□□□□ -2.06
PEX1YKL197C LCL1Q02786 101 aa2.15□□□□□ -2.06
PEX1YKL197C SIP18P50263 79 aa2.14□□□□□ -2.07
PEX1YKL197C FMP27Q06179 2628 aa2.13□□□□□ -2.07
PEX1YKL197C YOL097W-AQ3E7Y9 61 aa2.13□□□□□ -2.07
PEX1YKL197C YGL260WP53056 76 aa2.13□□□□□ -2.07
PEX1YKL197C YAR064WP39563 99 aa2.12□□□□□ -2.07
PEX1YKL197C GIS2P53849 153 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07not detected
PEX1YKL197C YMR230W-AQ3E7B5 62 aa2.1□□□□□ -2.07
PEX1YKL197C YOR011W-AQ3E807 68 aa2.1□□□□□ -2.07
PEX1YKL197C HFA1P32874 2273 aa2.09□□□□□ -2.07
PEX1YKL197C YHR007C-AQ07074 71 aa2.09□□□□□ -2.08
PEX1YKL197C YOR394C-AQ8TGJ0 55 aa2.09□□□□□ -2.08
PEX1YKL197C COX7P10174 60 aa2.08□□□□□ -2.08
PEX1YKL197C TRA1P38811 3744 aa2.08□□□□□ -2.08
PEX1YKL197C DYN1P36022 4092 aa2.08□□□□□ -2.08
PEX1YKL197C TOR2P32600 2474 aaKnown RBP2.07□□□□□ -2.08
PEX1YKL197C YCR108CQ3E819 63 aa2.06□□□□□ -2.08
PEX1YKL197C YJL127C-BQ3E828 52 aa2.06□□□□□ -2.08
PEX1YKL197C IRA1P18963 3092 aa2.06□□□□□ -2.08
PEX1YKL197C IRA2P19158 3079 aa2.06□□□□□ -2.08
PEX1YKL197C Q0297Q9ZZV8 51 aa2.06□□□□□ -2.08
PEX1YKL197C YBR230W-AQ3E762 66 aa2.05□□□□□ -2.08
PEX1YKL197C RPC10P40422 70 aa2.05□□□□□ -2.08
PEX1YKL197C YBL044WP38194 122 aa2.04□□□□□ -2.08
PEX1YKL197C TOR1P35169 2470 aa2.04□□□□□ -2.08
PEX1YKL197C RDS3Q06835 107 aaPredicted RBP2.04□□□□□ -2.08
PEX1YKL197C RPL29P05747 59 aaPredicted RBP2.03□□□□□ -2.08
PEX1YKL197C DDR2P89113 61 aa2.01□□□□□ -2.09
PEX1YKL197C PMP3P87284 55 aa2.01□□□□□ -2.09
PEX1YKL197C GCN1P33892 2672 aaKnown RBP2□□□□□ -2.09
PEX1YKL197C YMR105W-AQ8TGS8 64 aa1.99□□□□□ -2.09
PEX1YKL197C NUM1Q00402 2748 aa1.99□□□□□ -2.09
PEX1YKL197C OLI1P61829 76 aa1.98□□□□□ -2.09
PEX1YKL197C YLR307C-AQ3E825 87 aa1.98□□□□□ -2.09
PEX1YKL197C YGR146C-AQ8TGT9 53 aa1.98□□□□□ -2.09
PEX1YKL197C RPL39P04650 51 aa1.97□□□□□ -2.09
PEX1YKL197C RPL37BP51402 88 aaKnown RBP1.95□□□□□ -2.1
PEX1YKL197C YJL009WP47078 108 aa1.94□□□□□ -2.1
PEX1YKL197C YNL146C-AQ3E7Z1 64 aa1.94□□□□□ -2.1
PEX1YKL197C YBR016WP38216 128 aa1.93□□□□□ -2.1
PEX1YKL197C PRP8P33334 2413 aaKnown RBP1.92□□□□□ -2.1
PEX1YKL197C MEC1P38111 2368 aa1.91□□□□□ -2.1
PEX1YKL197C HOR7Q05827 59 aa1.9□□□□□ -2.11
PEX1YKL197C YOR316C-AQ3E806 69 aa1.87□□□□□ -2.11
PEX1YKL197C YHR212W-AP0CX91 67 aa1.86□□□□□ -2.11
PEX1YKL197C HHY1P39982 102 aa1.85□□□□□ -2.11
PEX1YKL197C YHR086W-AQ3E746 53 aa1.83□□□□□ -2.12
PEX1YKL197C YBR072C-AQ3E794 53 aa1.82□□□□□ -2.12
PEX1YKL197C YHR073W-AP0C5N7 58 aa1.79□□□□□ -2.12
PEX1YKL197C MDN1Q12019 4910 aaKnown RBP1.76□□□□□ -2.13
PEX1YKL197C YOL164W-AQ3E7A5 60 aa1.75□□□□□ -2.13
PEX1YKL197C RPL37AP49166 88 aaKnown RBP1.75□□□□□ -2.13
PEX1YKL197C UTP20P35194 2493 aaKnown RBP1.74□□□□□ -2.13
PEX1YKL197C YDR034C-AP0C289 58 aa1.73□□□□□ -2.13
PEX1YKL197C YOR072W-BQ3E832 53 aa1.71□□□□□ -2.14
PEX1YKL197C YLL066W-BQ8TGJ7 56 aa1.71□□□□□ -2.14
PEX1YKL197C YLR157W-EP0CF00 54 aa1.59□□□□□ -2.16
PEX1YKL197C YML054C-AQ3E809 52 aa1.39□□□□□ -2.19
PEX1YKL197C Q0017Q9ZZX8 53 aa1.34□□□□□ -2.19
PEX1YKL197C YHR050W-AQ05451 56 aa1.27□□□□□ -2.21
PEX1YKL197C RPS29BP41058 56 aaKnown RBP1.24□□□□□ -2.21
PEX1YKL197C RPS29AP41057 56 aaKnown RBP1.23□□□□□ -2.21
Retrieved 63 of 5,963 RNA–protein pairs in 42 ms