RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeastyeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT6YGR116W YJR085CP47131 105 aaKnown RBP2.43□□□□□ -2.02
SPT6YGR116W MRP10O75012 95 aa2.42□□□□□ -2.02
SPT6YGR116W YDR034C-AP0C289 58 aa2.42□□□□□ -2.02
SPT6YGR116W RPL43AP0CX25 92 aaKnown RBP2.42□□□□□ -2.02
SPT6YGR116W RPL43BP0CX26 92 aa2.42□□□□□ -2.02
SPT6YGR116W YLR122CQ12312 125 aa2.42□□□□□ -2.02
SPT6YGR116W YHR073W-AP0C5N7 58 aa2.42□□□□□ -2.02
SPT6YGR116W YJR128WP47162 119 aa2.42□□□□□ -2.02
SPT6YGR116W YBR056W-AI2HB52 66 aa2.41□□□□□ -2.02
SPT6YGR116W CSF1Q12150 2958 aa2.41□□□□□ -2.02
SPT6YGR116W OLI1P61829 76 aa2.4□□□□□ -2.03
SPT6YGR116W YLR255CO13574 117 aa2.4□□□□□ -2.03
SPT6YGR116W YBL008W-AQ3E821 79 aa2.4□□□□□ -2.03
SPT6YGR116W GCN1P33892 2672 aaKnown RBP2.39□□□□□ -2.03
SPT6YGR116W YGL014C-AP0C5N1 53 aa2.39□□□□□ -2.03
SPT6YGR116W TOR2P32600 2474 aaKnown RBP2.38□□□□□ -2.03
SPT6YGR116W IRA2P19158 3079 aa2.38□□□□□ -2.03
SPT6YGR116W YOR316C-AQ3E806 69 aa2.37□□□□□ -2.03
SPT6YGR116W SOM1Q05676 74 aa2.37□□□□□ -2.03
SPT6YGR116W YCL042WP25572 119 aa2.36□□□□□ -2.03
SPT6YGR116W LCL1Q02786 101 aa2.35□□□□□ -2.03
SPT6YGR116W PRP8P33334 2413 aaKnown RBP2.35□□□□□ -2.03
SPT6YGR116W YEL014CP39999 101 aa2.35□□□□□ -2.03
SPT6YGR116W FYV12Q08559 129 aa2.34□□□□□ -2.03
SPT6YGR116W RPL37BP51402 88 aaKnown RBP2.33□□□□□ -2.04
SPT6YGR116W COX7P10174 60 aa2.33□□□□□ -2.04
SPT6YGR116W IRA1P18963 3092 aa2.31□□□□□ -2.04
SPT6YGR116W MEC1P38111 2368 aa2.31□□□□□ -2.04
SPT6YGR116W YPR195CQ06594 109 aa2.31□□□□□ -2.04
SPT6YGR116W YBR016WP38216 128 aa2.3□□□□□ -2.04
SPT6YGR116W UTP20P35194 2493 aaKnown RBP2.3□□□□□ -2.04
SPT6YGR116W YOR394C-AQ8TGJ0 55 aa2.28□□□□□ -2.04
SPT6YGR116W YBL044WP38194 122 aa2.28□□□□□ -2.04
SPT6YGR116W YJL144WP47009 104 aa2.26□□□□□ -2.05
SPT6YGR116W YCR108CQ3E819 63 aa2.23□□□□□ -2.05
SPT6YGR116W YDR210WQ03482 75 aa2.18□□□□□ -2.06
SPT6YGR116W TRA1P38811 3744 aa2.18□□□□□ -2.06
SPT6YGR116W TEL1P38110 2787 aa2.15□□□□□ -2.06
SPT6YGR116W TOR1P35169 2470 aa2.15□□□□□ -2.07
SPT6YGR116W DYN1P36022 4092 aa2.15□□□□□ -2.07
SPT6YGR116W YOR072W-BQ3E832 53 aa2.14□□□□□ -2.07
SPT6YGR116W YBR072C-AQ3E794 53 aa2.13□□□□□ -2.07
SPT6YGR116W RPL37AP49166 88 aaKnown RBP2.12□□□□□ -2.07
SPT6YGR116W YFL067WP43537 175 aa2.12□□□□□ -2.07
SPT6YGR116W YML054C-AQ3E809 52 aa2.11□□□□□ -2.07
SPT6YGR116W CUP1-1P0CX80 61 aa2.11□□□□□ -2.07
SPT6YGR116W CUP1-2P0CX81 61 aa2.11□□□□□ -2.07
SPT6YGR116W HHY1P39982 102 aa2.1□□□□□ -2.07
SPT6YGR116W YER078W-AQ3E7A2 54 aa2.08□□□□□ -2.08
SPT6YGR116W Q0017Q9ZZX8 53 aa2.08□□□□□ -2.08
SPT6YGR116W CMC4Q3E7A9 73 aa2.07□□□□□ -2.08
SPT6YGR116W YJL009WP47078 108 aa2.07□□□□□ -2.08
SPT6YGR116W YER175W-AQ8TGU4 54 aa2.04□□□□□ -2.08
SPT6YGR116W NUM1Q00402 2748 aa2.02□□□□□ -2.09
SPT6YGR116W YHR032W-AP0C5N6 59 aa1.93□□□□□ -2.1
SPT6YGR116W YAL067W-AQ8TGK6 75 aa1.78□□□□□ -2.12
SPT6YGR116W YOL164W-AQ3E7A5 60 aa1.75□□□□□ -2.13
SPT6YGR116W YHR050W-AQ05451 56 aa1.73□□□□□ -2.13
SPT6YGR116W RPS29AP41057 56 aaKnown RBP1.55□□□□□ -2.16
SPT6YGR116W MDN1Q12019 4910 aaKnown RBP1.55□□□□□ -2.16
SPT6YGR116W RPS29BP41058 56 aaKnown RBP1.54□□□□□ -2.16
SPT6YGR116W YLR157W-EP0CF00 54 aa1.52□□□□□ -2.17
SPT6YGR116W YHR086W-AQ3E746 53 aa1.43□□□□□ -2.18
Retrieved 63 of 5,963 RNA–protein pairs in 56.3 ms