RNA–Protein interactions for RNA: YER087C-B

SBH1, Transcript of Beta subunit of Sec61p ER translocation complex (Sec61p-Sss1p-Sbh1p), yeastyeast

Gene SBH1, Length 249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SBH1YER087C-B CUP1-1P0CX80 61 aa-0.33□□□□□ -2.46
SBH1YER087C-B CUP1-2P0CX81 61 aa-0.33□□□□□ -2.46
SBH1YER087C-B RRP5Q05022 1729 aaKnown RBP-0.33□□□□□ -2.46
SBH1YER087C-B SCC2Q04002 1493 aa-0.34□□□□□ -2.46
SBH1YER087C-B COX9P07255 59 aa-0.34□□□□□ -2.46
SBH1YER087C-B ARO1P08566 1588 aaKnown RBP-0.34□□□□□ -2.46
SBH1YER087C-B YFR010W-AP0C5N0 62 aa-0.35□□□□□ -2.47
SBH1YER087C-B YKL023C-AQ2V2P3 75 aa-0.35□□□□□ -2.47
SBH1YER087C-B MYO4P32492 1471 aa-0.35□□□□□ -2.47
SBH1YER087C-B DOP1Q03921 1698 aa-0.36□□□□□ -2.47
SBH1YER087C-B TCB3Q03640 1545 aaKnown RBP-0.36□□□□□ -2.47
SBH1YER087C-B CSF1Q12150 2958 aa-0.36□□□□□ -2.47
SBH1YER087C-B FIG2P25653 1609 aa-0.36□□□□□ -2.47
SBH1YER087C-B PDR5P33302 1511 aaKnown RBP-0.37□□□□□ -2.47
SBH1YER087C-B YOR093CQ12275 1648 aa-0.37□□□□□ -2.47
SBH1YER087C-B DYN1P36022 4092 aa-0.37□□□□□ -2.47
SBH1YER087C-B DDR2P89113 61 aa-0.37□□□□□ -2.47
SBH1YER087C-B YJL133C-AQ3E7A3 74 aa-0.37□□□□□ -2.47
SBH1YER087C-B YMR105W-AQ8TGS8 64 aa-0.38□□□□□ -2.47
SBH1YER087C-B VMR1P38735 1592 aa-0.38□□□□□ -2.47
SBH1YER087C-B THO2P53552 1597 aaKnown RBP-0.38□□□□□ -2.47
SBH1YER087C-B YHR073W-AP0C5N7 58 aa-0.39□□□□□ -2.47
SBH1YER087C-B YLR342W-AQ3E810 57 aa-0.39□□□□□ -2.47
SBH1YER087C-B FLO1P32768 1537 aa-0.39□□□□□ -2.47
SBH1YER087C-B MDN1Q12019 4910 aaKnown RBP-0.4□□□□□ -2.47
SBH1YER087C-B YCF1P39109 1515 aaKnown RBP-0.4□□□□□ -2.47
SBH1YER087C-B TY1B-DR4Q07793 1604 aa-0.41□□□□□ -2.47
SBH1YER087C-B SMX2P40204 77 aaKnown RBP-0.42□□□□□ -2.48
SBH1YER087C-B YJL127C-BQ3E828 52 aa-0.43□□□□□ -2.48
SBH1YER087C-B NUM1Q00402 2748 aa-0.43□□□□□ -2.48
SBH1YER087C-B SSK2P53599 1579 aa-0.44□□□□□ -2.48
SBH1YER087C-B IRA2P19158 3079 aa-0.44□□□□□ -2.48
SBH1YER087C-B STU1P38198 1513 aa-0.44□□□□□ -2.48
SBH1YER087C-B IRA1P18963 3092 aa-0.46□□□□□ -2.48
SBH1YER087C-B YBT1P32386 1661 aa-0.46□□□□□ -2.48
SBH1YER087C-B NUP170P38181 1502 aa-0.46□□□□□ -2.48
SBH1YER087C-B PMP3P87284 55 aa-0.46□□□□□ -2.48
SBH1YER087C-B ATG2P53855 1592 aa-0.46□□□□□ -2.48
SBH1YER087C-B TRA1P38811 3744 aa-0.47□□□□□ -2.48
SBH1YER087C-B SPT6P23615 1451 aaKnown RBP-0.48□□□□□ -2.49
SBH1YER087C-B CDC25P04821 1589 aa-0.48□□□□□ -2.49
SBH1YER087C-B PEP1P32319 1579 aa-0.49□□□□□ -2.49
SBH1YER087C-B BUD3P25558 1636 aa-0.49□□□□□ -2.49
SBH1YER087C-B NUP188P52593 1655 aaKnown RBP-0.51□□□□□ -2.49
SBH1YER087C-B ULS1Q08562 1619 aa-0.51□□□□□ -2.49
SBH1YER087C-B GCN2P15442 1659 aa-0.52□□□□□ -2.49
SBH1YER087C-B NUP192P47054 1683 aa-0.53□□□□□ -2.49
SBH1YER087C-B HOR7Q05827 59 aa-0.53□□□□□ -2.49
SBH1YER087C-B YLL066W-BQ8TGJ7 56 aa-0.54□□□□□ -2.5
SBH1YER087C-B RKR1Q04781 1562 aa-0.54□□□□□ -2.5
SBH1YER087C-B VPS13Q07878 3144 aa-0.54□□□□□ -2.5
SBH1YER087C-B TOM7P53507 60 aa-0.56□□□□□ -2.5
SBH1YER087C-B USO1P25386 1790 aa-0.57□□□□□ -2.5
SBH1YER087C-B HIR3P47171 1648 aa-0.58□□□□□ -2.5
SBH1YER087C-B MON2P48563 1636 aaPredicted RBP-0.62□□□□□ -2.51
SBH1YER087C-B NCE101Q02820 53 aa-0.65□□□□□ -2.51
SBH1YER087C-B CHC1P22137 1653 aaKnown RBP-0.69□□□□□ -2.52
SBH1YER087C-B MLP2P40457 1679 aa-0.74□□□□□ -2.53
SBH1YER087C-B TOM1Q03280 3268 aa-0.76□□□□□ -2.53
SBH1YER087C-B RPL39P04650 51 aa-0.77□□□□□ -2.53
SBH1YER087C-B Q0297Q9ZZV8 51 aa-0.88□□□□□ -2.55
SBH1YER087C-B YIL046W-AQ3E7Z4 54 aa-0.93□□□□□ -2.56
SBH1YER087C-B YDR034W-BQ6Q5X2 51 aa-1.26□□□□□ -2.61
Retrieved 63 of 5,963 RNA–protein pairs in 48.9 ms