RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W YKL018C-AQ3E7A7 99 aa0.5□□□□□ -2.33
MSN5YDR335W YPR108W-AQ3E7B3 70 aa0.49□□□□□ -2.33
MSN5YDR335W Q0297Q9ZZV8 51 aa0.49□□□□□ -2.33
MSN5YDR335W VPS13Q07878 3144 aa0.49□□□□□ -2.33
MSN5YDR335W TAO3P40468 2376 aa0.49□□□□□ -2.33
MSN5YDR335W SGF11Q03067 99 aa0.49□□□□□ -2.33
MSN5YDR335W YOR394C-AQ8TGJ0 55 aa0.49□□□□□ -2.33
MSN5YDR335W YBL044WP38194 122 aa0.48□□□□□ -2.33
MSN5YDR335W YBL039W-BP0C268 59 aa0.48□□□□□ -2.33
MSN5YDR335W RPC10P40422 70 aa0.48□□□□□ -2.33
MSN5YDR335W YLR307C-AQ3E825 87 aa0.47□□□□□ -2.33
MSN5YDR335W YMR001C-AQ8TGS9 76 aa0.47□□□□□ -2.33
MSN5YDR335W TOR1P35169 2470 aa0.47□□□□□ -2.33
MSN5YDR335W YLR157W-EP0CF00 54 aa0.47□□□□□ -2.33
MSN5YDR335W RPS27BP38711 82 aa0.47□□□□□ -2.33
MSN5YDR335W YBR230W-AQ3E762 66 aa0.45□□□□□ -2.34
MSN5YDR335W YOR192C-CQ3E736 78 aa0.44□□□□□ -2.34
MSN5YDR335W RPS29BP41058 56 aaKnown RBP0.43□□□□□ -2.34
MSN5YDR335W IRA2P19158 3079 aa0.42□□□□□ -2.34
MSN5YDR335W SMX2P40204 77 aaKnown RBP0.42□□□□□ -2.34
MSN5YDR335W TOS6P48560 102 aa0.42□□□□□ -2.34
MSN5YDR335W YLR157W-DP0CE99 70 aa0.42□□□□□ -2.34
MSN5YDR335W YOL164W-AQ3E7A5 60 aa0.39□□□□□ -2.35
MSN5YDR335W YPR010C-AA5Z2X5 72 aa0.39□□□□□ -2.35
MSN5YDR335W YFR009W-AP0C5M9 85 aa0.38□□□□□ -2.35
MSN5YDR335W OLI1P61829 76 aa0.38□□□□□ -2.35
MSN5YDR335W YLR146W-AQ2V2P1 62 aa0.38□□□□□ -2.35
MSN5YDR335W CSF1Q12150 2958 aa0.37□□□□□ -2.35
MSN5YDR335W HFA1P32874 2273 aa0.36□□□□□ -2.35
MSN5YDR335W YCR108CQ3E819 63 aa0.36□□□□□ -2.35
MSN5YDR335W BPH1P25356 2167 aa0.36□□□□□ -2.35
MSN5YDR335W YGR146C-AQ8TGT9 53 aa0.35□□□□□ -2.35
MSN5YDR335W RPS29AP41057 56 aaKnown RBP0.33□□□□□ -2.36
MSN5YDR335W YOR008C-AQ3E7B9 74 aa0.31□□□□□ -2.36
MSN5YDR335W URA2P07259 2214 aaKnown RBP0.31□□□□□ -2.36
MSN5YDR335W YOR316C-AQ3E806 69 aa0.27□□□□□ -2.37
MSN5YDR335W SIP18P50263 79 aa0.27□□□□□ -2.37
MSN5YDR335W DDR2P89113 61 aa0.27□□□□□ -2.37
MSN5YDR335W TOR2P32600 2474 aaKnown RBP0.26□□□□□ -2.37
MSN5YDR335W COA2Q3E823 68 aa0.26□□□□□ -2.37
MSN5YDR335W RPL29P05747 59 aaPredicted RBP0.26□□□□□ -2.37
MSN5YDR335W YLR342W-AQ3E810 57 aa0.25□□□□□ -2.37
MSN5YDR335W COX9P07255 59 aa0.25□□□□□ -2.37
MSN5YDR335W YJL133C-AQ3E7A3 74 aa0.24□□□□□ -2.37
MSN5YDR335W YHR073W-AP0C5N7 58 aa0.23□□□□□ -2.37
MSN5YDR335W YOR072W-BQ3E832 53 aa0.23□□□□□ -2.37
MSN5YDR335W HOR7Q05827 59 aa0.21□□□□□ -2.38
MSN5YDR335W SEN1Q00416 2231 aaKnown RBP0.21□□□□□ -2.38
MSN5YDR335W NCE101Q02820 53 aa0.2□□□□□ -2.38
MSN5YDR335W UTP20P35194 2493 aaKnown RBP0.19□□□□□ -2.38
MSN5YDR335W YLL006W-AQ3E814 58 aa0.19□□□□□ -2.38
MSN5YDR335W YDR034C-AP0C289 58 aa0.17□□□□□ -2.38
MSN5YDR335W YLL066W-BQ8TGJ7 56 aa0.17□□□□□ -2.38
MSN5YDR335W YJL127C-BQ3E828 52 aa0.15□□□□□ -2.38
MSN5YDR335W TOM7P53507 60 aa0.15□□□□□ -2.39
MSN5YDR335W Q0017Q9ZZX8 53 aa0.15□□□□□ -2.39
MSN5YDR335W YGL258W-AQ3E740 77 aa0.14□□□□□ -2.39
MSN5YDR335W YHR050W-AQ05451 56 aa0.13□□□□□ -2.39
MSN5YDR335W MEC1P38111 2368 aa0.12□□□□□ -2.39
MSN5YDR335W YMR105W-AQ8TGS8 64 aa0.11□□□□□ -2.39
MSN5YDR335W YML054C-AQ3E809 52 aa0.05□□□□□ -2.4
MSN5YDR335W RPL39P04650 51 aa0.03□□□□□ -2.4
MSN5YDR335W PMP3P87284 55 aa0.03□□□□□ -2.4
Retrieved 63 of 5,963 RNA–protein pairs in 5.3 ms