RNA–Protein interactions for RNA: YDR108W

TRS85, Transcript of Component of transport protein particle (TRAPP) complex III, yeastyeast

Gene TRS85, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS85YDR108W YJR128WP47162 119 aa2.69□□□□□ -1.98
TRS85YDR108W YDR115WQ04598 105 aa2.68□□□□□ -1.98
TRS85YDR108W YMR230W-AQ3E7B5 62 aa2.68□□□□□ -1.98
TRS85YDR108W YGR146C-AQ8TGT9 53 aa2.68□□□□□ -1.98
TRS85YDR108W TOR1P35169 2470 aa2.67□□□□□ -1.98
TRS85YDR108W YLR255CO13574 117 aa2.67□□□□□ -1.98
TRS85YDR108W RPL43AP0CX25 92 aaKnown RBP2.67□□□□□ -1.98
TRS85YDR108W RPL43BP0CX26 92 aa2.67□□□□□ -1.98
TRS85YDR108W RPL33AP05744 107 aaKnown RBP2.66□□□□□ -1.98
TRS85YDR108W RPL33BP41056 107 aaKnown RBP2.66□□□□□ -1.98
TRS85YDR108W CUP1-1P0CX80 61 aa2.65□□□□□ -1.98
TRS85YDR108W CUP1-2P0CX81 61 aa2.65□□□□□ -1.98
TRS85YDR108W YGL041C-BQ3E750 60 aa2.65□□□□□ -1.98
TRS85YDR108W NUM1Q00402 2748 aa2.65□□□□□ -1.99
TRS85YDR108W YFL067WP43537 175 aa2.65□□□□□ -1.99
TRS85YDR108W YOR394C-AQ8TGJ0 55 aa2.64□□□□□ -1.99
TRS85YDR108W HFA1P32874 2273 aa2.64□□□□□ -1.99
TRS85YDR108W YPR195CQ06594 109 aa2.63□□□□□ -1.99
TRS85YDR108W YHR032W-AP0C5N6 59 aa2.62□□□□□ -1.99
TRS85YDR108W YCR108CQ3E819 63 aa2.61□□□□□ -1.99
TRS85YDR108W TAO3P40468 2376 aa2.6□□□□□ -1.99
TRS85YDR108W RPL37BP51402 88 aaKnown RBP2.6□□□□□ -1.99
TRS85YDR108W YDR034W-BQ6Q5X2 51 aa2.6□□□□□ -1.99
TRS85YDR108W YAL067W-AQ8TGK6 75 aa2.59□□□□□ -2
TRS85YDR108W CSF1Q12150 2958 aa2.59□□□□□ -2
TRS85YDR108W YBL044WP38194 122 aa2.58□□□□□ -2
TRS85YDR108W OLI1P61829 76 aa2.58□□□□□ -2
TRS85YDR108W YLL066W-BQ8TGJ7 56 aa2.58□□□□□ -2
TRS85YDR108W COX7P10174 60 aa2.57□□□□□ -2
TRS85YDR108W YOR316C-AQ3E806 69 aa2.57□□□□□ -2
TRS85YDR108W YHR212W-AP0CX91 67 aa2.57□□□□□ -2
TRS85YDR108W YHR073W-AP0C5N7 58 aa2.56□□□□□ -2
TRS85YDR108W YBR016WP38216 128 aa2.53□□□□□ -2
TRS85YDR108W GCN1P33892 2672 aaKnown RBP2.53□□□□□ -2
TRS85YDR108W TOR2P32600 2474 aaKnown RBP2.52□□□□□ -2.01
TRS85YDR108W YJL144WP47009 104 aa2.49□□□□□ -2.01
TRS85YDR108W TRA1P38811 3744 aa2.48□□□□□ -2.01
TRS85YDR108W LCL1Q02786 101 aa2.48□□□□□ -2.01
TRS85YDR108W YGL260WP53056 76 aa2.47□□□□□ -2.01
TRS85YDR108W IRA1P18963 3092 aa2.47□□□□□ -2.01
TRS85YDR108W TEL1P38110 2787 aa2.43□□□□□ -2.02
TRS85YDR108W PRP8P33334 2413 aaKnown RBP2.43□□□□□ -2.02
TRS85YDR108W Q0297Q9ZZV8 51 aa2.41□□□□□ -2.02
TRS85YDR108W YDR034C-AP0C289 58 aa2.38□□□□□ -2.03
TRS85YDR108W YBR072C-AQ3E794 53 aa2.38□□□□□ -2.03
TRS85YDR108W MEC1P38111 2368 aa2.38□□□□□ -2.03
TRS85YDR108W HHY1P39982 102 aa2.37□□□□□ -2.03
TRS85YDR108W RPL37AP49166 88 aaKnown RBP2.36□□□□□ -2.03
TRS85YDR108W UTP20P35194 2493 aaKnown RBP2.36□□□□□ -2.03
TRS85YDR108W YJL009WP47078 108 aa2.35□□□□□ -2.03
TRS85YDR108W FMP27Q06179 2628 aa2.35□□□□□ -2.03
TRS85YDR108W YOR072W-BQ3E832 53 aa2.31□□□□□ -2.04
TRS85YDR108W YBR056W-AI2HB52 66 aa2.27□□□□□ -2.05
TRS85YDR108W YOL164W-AQ3E7A5 60 aa2.09□□□□□ -2.07
TRS85YDR108W YML054C-AQ3E809 52 aa2.09□□□□□ -2.07
TRS85YDR108W YHR086W-AQ3E746 53 aa2.04□□□□□ -2.08
TRS85YDR108W Q0017Q9ZZX8 53 aa1.98□□□□□ -2.09
TRS85YDR108W MDN1Q12019 4910 aaKnown RBP1.92□□□□□ -2.1
TRS85YDR108W DYN1P36022 4092 aa1.9□□□□□ -2.11
TRS85YDR108W YLR157W-EP0CF00 54 aa1.82□□□□□ -2.12
TRS85YDR108W YHR050W-AQ05451 56 aa1.79□□□□□ -2.12
TRS85YDR108W RPS29AP41057 56 aaKnown RBP1.69□□□□□ -2.14
TRS85YDR108W RPS29BP41058 56 aaKnown RBP1.54□□□□□ -2.16
Retrieved 63 of 5,963 RNA–protein pairs in 43.7 ms