RNA–Protein interactions for RNA: YCR020W-B

HTL1, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene HTL1, Length 237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HTL1YCR020W-B YSY6P38374 65 aa-4.55□□□□□ -3.14
HTL1YCR020W-B YFL041W-AQ3E817 63 aa-4.56□□□□□ -3.14
HTL1YCR020W-B VMR1P38735 1592 aa-4.57□□□□□ -3.14
HTL1YCR020W-B RPL29P05747 59 aaPredicted RBP-4.57□□□□□ -3.14
HTL1YCR020W-B YDR034C-AP0C289 58 aa-4.57□□□□□ -3.14
HTL1YCR020W-B RPO31P04051 1460 aa-4.61□□□□□ -3.15
HTL1YCR020W-B YOR316C-AQ3E806 69 aa-4.62□□□□□ -3.15
HTL1YCR020W-B IRA1P18963 3092 aa-4.63□□□□□ -3.15
HTL1YCR020W-B DOP1Q03921 1698 aa-4.64□□□□□ -3.15
HTL1YCR020W-B YHR213W-AQ8TGT4 77 aa-4.67□□□□□ -3.16
HTL1YCR020W-B FLO1P32768 1537 aa-4.72□□□□□ -3.16
HTL1YCR020W-B IRA2P19158 3079 aa-4.73□□□□□ -3.17
HTL1YCR020W-B PDR5P33302 1511 aaKnown RBP-4.75□□□□□ -3.17
HTL1YCR020W-B TCB3Q03640 1545 aaKnown RBP-4.76□□□□□ -3.17
HTL1YCR020W-B NUP159P40477 1460 aa-4.81□□□□□ -3.18
HTL1YCR020W-B YIL102C-AQ2V2P5 75 aa-4.82□□□□□ -3.18
HTL1YCR020W-B SCC2Q04002 1493 aa-4.88□□□□□ -3.19
HTL1YCR020W-B YPR010C-AA5Z2X5 72 aa-4.94□□□□□ -3.2
HTL1YCR020W-B SSK2P53599 1579 aa-4.95□□□□□ -3.2
HTL1YCR020W-B PAI3P01094 68 aa-4.95□□□□□ -3.2
HTL1YCR020W-B YMR105W-AQ8TGS8 64 aa-4.97□□□□□ -3.21
HTL1YCR020W-B YCF1P39109 1515 aaKnown RBP-4.99□□□□□ -3.21
HTL1YCR020W-B YBT1P32386 1661 aa-5.09□□□□□ -3.22
HTL1YCR020W-B MYO4P32492 1471 aa-5.15□□□□□ -3.23
HTL1YCR020W-B NUP188P52593 1655 aaKnown RBP-5.15□□□□□ -3.23
HTL1YCR020W-B YHR073W-AP0C5N7 58 aa-5.18□□□□□ -3.24
HTL1YCR020W-B YJL133C-AQ3E7A3 74 aa-5.26□□□□□ -3.25
HTL1YCR020W-B VPS13Q07878 3144 aa-5.29□□□□□ -3.26
HTL1YCR020W-B STU1P38198 1513 aa-5.38□□□□□ -3.27
HTL1YCR020W-B ULS1Q08562 1619 aa-5.38□□□□□ -3.27
HTL1YCR020W-B SKI3P17883 1432 aaKnown RBP-5.4□□□□□ -3.27
HTL1YCR020W-B GCN2P15442 1659 aa-5.4□□□□□ -3.27
HTL1YCR020W-B DDR2P89113 61 aa-5.4□□□□□ -3.27
HTL1YCR020W-B ATG2P53855 1592 aa-5.41□□□□□ -3.28
HTL1YCR020W-B CDC25P04821 1589 aa-5.42□□□□□ -3.28
HTL1YCR020W-B BUD3P25558 1636 aa-5.45□□□□□ -3.28
HTL1YCR020W-B COX9P07255 59 aa-5.48□□□□□ -3.29
HTL1YCR020W-B VMA9Q3E7B6 73 aa-5.49□□□□□ -3.29
HTL1YCR020W-B YKL023C-AQ2V2P3 75 aa-5.5□□□□□ -3.29
HTL1YCR020W-B NUP170P38181 1502 aa-5.72□□□□□ -3.32
HTL1YCR020W-B YLR342W-AQ3E810 57 aa-5.75□□□□□ -3.33
HTL1YCR020W-B PEP1P32319 1579 aa-5.91□□□□□ -3.36
HTL1YCR020W-B NUP192P47054 1683 aa-5.93□□□□□ -3.36
HTL1YCR020W-B YFR010W-AP0C5N0 62 aa-6□□□□□ -3.37
HTL1YCR020W-B YJL127C-BQ3E828 52 aa-6□□□□□ -3.37
HTL1YCR020W-B HIR3P47171 1648 aa-6.03□□□□□ -3.38
HTL1YCR020W-B USO1P25386 1790 aa-6.04□□□□□ -3.38
HTL1YCR020W-B PMP3P87284 55 aa-6.26□□□□□ -3.41
HTL1YCR020W-B SPT6P23615 1451 aaKnown RBP-6.34□□□□□ -3.42
HTL1YCR020W-B SMX2P40204 77 aaKnown RBP-6.35□□□□□ -3.43
HTL1YCR020W-B RKR1Q04781 1562 aa-6.35□□□□□ -3.43
HTL1YCR020W-B YLL066W-BQ8TGJ7 56 aa-6.37□□□□□ -3.43
HTL1YCR020W-B HOR7Q05827 59 aa-6.64□□□□□ -3.47
HTL1YCR020W-B MON2P48563 1636 aaPredicted RBP-6.74□□□□□ -3.49
HTL1YCR020W-B TOM1Q03280 3268 aa-6.92□□□□□ -3.52
HTL1YCR020W-B CHC1P22137 1653 aaKnown RBP-7.01□□□□□ -3.53
HTL1YCR020W-B MLP2P40457 1679 aa-7.13□□□□□ -3.55
HTL1YCR020W-B TOM7P53507 60 aa-7.28□□□□□ -3.57
HTL1YCR020W-B NCE101Q02820 53 aa-7.9□□□□□ -3.67
HTL1YCR020W-B RPL39P04650 51 aa-8.75□□□□□ -3.81
HTL1YCR020W-B Q0297Q9ZZV8 51 aa-9.15□□□□□ -3.87
HTL1YCR020W-B YIL046W-AQ3E7Z4 54 aa-9.73□□□□□ -3.97
HTL1YCR020W-B YDR034W-BQ6Q5X2 51 aa-11.94□□□□□ -4.32
Retrieved 63 of 5,963 RNA–protein pairs in 5.5 ms