RNA–Protein interactions for RNA: YBR182C

SMP1, Transcript of MADS-box transcription factor involved in osmotic stress response, yeastyeast

Gene SMP1, Length 1,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMP1YBR182C YPR117WQ06116 2489 aa1.83□□□□□ -2.12
SMP1YBR182C NCE101Q02820 53 aa1.83□□□□□ -2.12
SMP1YBR182C YOR394C-AQ8TGJ0 55 aa1.8□□□□□ -2.12
SMP1YBR182C YMR001C-AQ8TGS9 76 aa1.8□□□□□ -2.12
SMP1YBR182C YBR016WP38216 128 aa1.79□□□□□ -2.12
SMP1YBR182C YIL046W-AQ3E7Z4 54 aa1.79□□□□□ -2.12
SMP1YBR182C COX9P07255 59 aa1.78□□□□□ -2.12
SMP1YBR182C YLR157W-DP0CE99 70 aa1.78□□□□□ -2.12
SMP1YBR182C YOR192C-CQ3E736 78 aa1.77□□□□□ -2.13
SMP1YBR182C YFR009W-AP0C5M9 85 aa1.75□□□□□ -2.13
SMP1YBR182C OLI1P61829 76 aa1.75□□□□□ -2.13
SMP1YBR182C FMP27Q06179 2628 aa1.75□□□□□ -2.13
SMP1YBR182C SIP18P50263 79 aa1.74□□□□□ -2.13
SMP1YBR182C TOR2P32600 2474 aaKnown RBP1.73□□□□□ -2.13
SMP1YBR182C RPS29BP41058 56 aaKnown RBP1.71□□□□□ -2.14
SMP1YBR182C YGR025WP53216 100 aa1.71□□□□□ -2.14
SMP1YBR182C IRA2P19158 3079 aa1.69□□□□□ -2.14
SMP1YBR182C CSF1Q12150 2958 aa1.68□□□□□ -2.14
SMP1YBR182C SEN1Q00416 2231 aaKnown RBP1.68□□□□□ -2.14
SMP1YBR182C RPL39P04650 51 aa1.68□□□□□ -2.14
SMP1YBR182C YBL044WP38194 122 aa1.67□□□□□ -2.14
SMP1YBR182C YBR230W-AQ3E762 66 aa1.67□□□□□ -2.14
SMP1YBR182C IRA1P18963 3092 aa1.67□□□□□ -2.14
SMP1YBR182C YGL258W-AQ3E740 77 aa1.66□□□□□ -2.14
SMP1YBR182C COA2Q3E823 68 aa1.65□□□□□ -2.15
SMP1YBR182C YMR105W-AQ8TGS8 64 aa1.65□□□□□ -2.15
SMP1YBR182C PRP8P33334 2413 aaKnown RBP1.65□□□□□ -2.15
SMP1YBR182C CUP1-1P0CX80 61 aa1.64□□□□□ -2.15
SMP1YBR182C CUP1-2P0CX81 61 aa1.64□□□□□ -2.15
SMP1YBR182C GCN1P33892 2672 aaKnown RBP1.63□□□□□ -2.15
SMP1YBR182C TOR1P35169 2470 aa1.62□□□□□ -2.15
SMP1YBR182C YPR010C-AA5Z2X5 72 aa1.62□□□□□ -2.15
SMP1YBR182C Q0297Q9ZZV8 51 aa1.62□□□□□ -2.15
SMP1YBR182C TEL1P38110 2787 aa1.62□□□□□ -2.15
SMP1YBR182C YBR056W-AI2HB52 66 aa1.6□□□□□ -2.15
SMP1YBR182C HOR7Q05827 59 aa1.59□□□□□ -2.15
SMP1YBR182C TOM7P53507 60 aa1.59□□□□□ -2.16
SMP1YBR182C YLR342W-AQ3E810 57 aa1.57□□□□□ -2.16
SMP1YBR182C TRA1P38811 3744 aa1.56□□□□□ -2.16
SMP1YBR182C MEC1P38111 2368 aa1.56□□□□□ -2.16
SMP1YBR182C TOS6P48560 102 aa1.56□□□□□ -2.16
SMP1YBR182C PMP3P87284 55 aa1.53□□□□□ -2.16
SMP1YBR182C YOR008C-AQ3E7B9 74 aa1.53□□□□□ -2.16
SMP1YBR182C NUM1Q00402 2748 aa1.53□□□□□ -2.16
SMP1YBR182C YGR146C-AQ8TGT9 53 aa1.49□□□□□ -2.17
SMP1YBR182C YCR108CQ3E819 63 aa1.47□□□□□ -2.17
SMP1YBR182C YLL006W-AQ3E814 58 aa1.42□□□□□ -2.18
SMP1YBR182C UTP20P35194 2493 aaKnown RBP1.4□□□□□ -2.18
SMP1YBR182C RPL29P05747 59 aaPredicted RBP1.4□□□□□ -2.19
SMP1YBR182C YDR034C-AP0C289 58 aa1.4□□□□□ -2.19
SMP1YBR182C YLL066W-BQ8TGJ7 56 aa1.4□□□□□ -2.19
SMP1YBR182C DDR2P89113 61 aa1.37□□□□□ -2.19
SMP1YBR182C YJL133C-AQ3E7A3 74 aa1.37□□□□□ -2.19
SMP1YBR182C YJL127C-BQ3E828 52 aa1.37□□□□□ -2.19
SMP1YBR182C YOR072W-BQ3E832 53 aa1.33□□□□□ -2.2
SMP1YBR182C DYN1P36022 4092 aa1.32□□□□□ -2.2
SMP1YBR182C YOR316C-AQ3E806 69 aa1.3□□□□□ -2.2
SMP1YBR182C YHR073W-AP0C5N7 58 aa1.22□□□□□ -2.21
SMP1YBR182C RPS29AP41057 56 aaKnown RBP1.17□□□□□ -2.22
SMP1YBR182C Q0017Q9ZZX8 53 aa1.17□□□□□ -2.22
SMP1YBR182C MDN1Q12019 4910 aaKnown RBP1.16□□□□□ -2.22
SMP1YBR182C YML054C-AQ3E809 52 aa1.13□□□□□ -2.23
SMP1YBR182C YHR050W-AQ05451 56 aa0.97□□□□□ -2.25
Retrieved 63 of 5,963 RNA–protein pairs in 63.1 ms