RNA–Protein interactions for RNA: YAL021C

CCR4, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CCR4, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCR4YAL021C YJR128WP47162 119 aa4.61□□□□□ -1.67
CCR4YAL021C HFA1P32874 2273 aa4.6□□□□□ -1.67
CCR4YAL021C YIL086CP40503 102 aa4.6□□□□□ -1.67
CCR4YAL021C YGR240C-AQ3E786 66 aa4.59□□□□□ -1.67
CCR4YAL021C YHR007C-AQ07074 71 aa4.58□□□□□ -1.68
CCR4YAL021C YOR394C-AQ8TGJ0 55 aa4.58□□□□□ -1.68
CCR4YAL021C GIS2P53849 153 aaKnown RBP RIP-Chip data4.56□□□□□ -1.68not detected
CCR4YAL021C TAR1Q8TGM6 124 aa4.51□□□□□ -1.69
CCR4YAL021C YCR108CQ3E819 63 aa4.51□□□□□ -1.69
CCR4YAL021C YMR230W-AQ3E7B5 62 aa4.5□□□□□ -1.69
CCR4YAL021C YGR146C-AQ8TGT9 53 aa4.49□□□□□ -1.69
CCR4YAL021C COX7P10174 60 aa4.48□□□□□ -1.69
CCR4YAL021C RPC10P40422 70 aa4.48□□□□□ -1.69
CCR4YAL021C YJL144WP47009 104 aa4.47□□□□□ -1.69
CCR4YAL021C LCL1Q02786 101 aa4.47□□□□□ -1.69
CCR4YAL021C HOR7Q05827 59 aa4.46□□□□□ -1.69
CCR4YAL021C YFL067WP43537 175 aa4.45□□□□□ -1.7
CCR4YAL021C YBL044WP38194 122 aa4.42□□□□□ -1.7
CCR4YAL021C RPL37BP51402 88 aaKnown RBP4.42□□□□□ -1.7
CCR4YAL021C YDR524C-BQ3E6R4 66 aa4.42□□□□□ -1.7
CCR4YAL021C TAO3P40468 2376 aa4.38□□□□□ -1.71
CCR4YAL021C YPR117WQ06116 2489 aa4.38□□□□□ -1.71
CCR4YAL021C RDS3Q06835 107 aaPredicted RBP4.37□□□□□ -1.71
CCR4YAL021C IRA1P18963 3092 aa4.36□□□□□ -1.71
CCR4YAL021C OLI1P61829 76 aa4.34□□□□□ -1.72
CCR4YAL021C GCN1P33892 2672 aaKnown RBP4.29□□□□□ -1.72
CCR4YAL021C YOR316C-AQ3E806 69 aa4.29□□□□□ -1.72
CCR4YAL021C YBR016WP38216 128 aa4.28□□□□□ -1.72
CCR4YAL021C PRP8P33334 2413 aaKnown RBP4.27□□□□□ -1.73
CCR4YAL021C MEC1P38111 2368 aa4.25□□□□□ -1.73
CCR4YAL021C CSF1Q12150 2958 aa4.21□□□□□ -1.74
CCR4YAL021C YHR073W-AP0C5N7 58 aa4.21□□□□□ -1.74
CCR4YAL021C NUM1Q00402 2748 aa4.18□□□□□ -1.74
CCR4YAL021C TRA1P38811 3744 aa4.17□□□□□ -1.74
CCR4YAL021C TOR2P32600 2474 aaKnown RBP4.15□□□□□ -1.74
CCR4YAL021C CUP1-1P0CX80 61 aa4.15□□□□□ -1.74
CCR4YAL021C CUP1-2P0CX81 61 aa4.15□□□□□ -1.74
CCR4YAL021C YJL009WP47078 108 aa4.15□□□□□ -1.74
CCR4YAL021C YDR034W-BQ6Q5X2 51 aa4.14□□□□□ -1.75
CCR4YAL021C YLL066W-BQ8TGJ7 56 aa4.14□□□□□ -1.75
CCR4YAL021C TOR1P35169 2470 aa4.11□□□□□ -1.75
CCR4YAL021C HHY1P39982 102 aa4.03□□□□□ -1.76
CCR4YAL021C YBR072C-AQ3E794 53 aa4.02□□□□□ -1.77
CCR4YAL021C UTP20P35194 2493 aaKnown RBP4□□□□□ -1.77
CCR4YAL021C YHR212W-AP0CX91 67 aa3.99□□□□□ -1.77
CCR4YAL021C FMP27Q06179 2628 aa3.98□□□□□ -1.77
CCR4YAL021C TEL1P38110 2787 aa3.97□□□□□ -1.77
CCR4YAL021C RPL37AP49166 88 aaKnown RBP3.96□□□□□ -1.77
CCR4YAL021C YDR034C-AP0C289 58 aa3.94□□□□□ -1.78
CCR4YAL021C YOR072W-BQ3E832 53 aa3.83□□□□□ -1.8
CCR4YAL021C YHR086W-AQ3E746 53 aa3.71□□□□□ -1.82
CCR4YAL021C YOL164W-AQ3E7A5 60 aa3.7□□□□□ -1.82
CCR4YAL021C YGL260WP53056 76 aa3.68□□□□□ -1.82
CCR4YAL021C Q0297Q9ZZV8 51 aa3.64□□□□□ -1.83
CCR4YAL021C YBR056W-AI2HB52 66 aa3.52□□□□□ -1.85
CCR4YAL021C DYN1P36022 4092 aa3.4□□□□□ -1.86
CCR4YAL021C YLR157W-EP0CF00 54 aa3.27□□□□□ -1.89
CCR4YAL021C YML054C-AQ3E809 52 aa3.27□□□□□ -1.89
CCR4YAL021C Q0017Q9ZZX8 53 aa3.11□□□□□ -1.91
CCR4YAL021C MDN1Q12019 4910 aaKnown RBP3.04□□□□□ -1.92
CCR4YAL021C YHR050W-AQ05451 56 aa2.91□□□□□ -1.94
CCR4YAL021C RPS29AP41057 56 aaKnown RBP2.8□□□□□ -1.96
CCR4YAL021C RPS29BP41058 56 aaKnown RBP2.65□□□□□ -1.99
Retrieved 63 of 5,963 RNA–protein pairs in 25.3 ms