RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 P2RY2P41231 377 aa10.66□□□□□ -0.7
PHGDH-222ENST00000641587 CACNA2D1P54289 1103 aa10.66□□□□□ -0.7
PHGDH-222ENST00000641587 POU5F1Q01860 360 aaKnown RBP10.66□□□□□ -0.7
PHGDH-222ENST00000641587 DHCR24Q15392 516 aa10.66□□□□□ -0.7
PHGDH-222ENST00000641587 FAM171BQ6P995 826 aa10.66□□□□□ -0.7
PHGDH-222ENST00000641587 C11orf74Q86VG3 221 aa10.66□□□□□ -0.7
PHGDH-222ENST00000641587 SYCP3Q8IZU3 236 aa10.66□□□□□ -0.7
PHGDH-222ENST00000641587 GUF1Q8N442 669 aaKnown RBP10.66□□□□□ -0.7
PHGDH-222ENST00000641587 DEFB119Q8N690 84 aa10.66□□□□□ -0.7
PHGDH-222ENST00000641587 TOP6BLQ8N6T0 577 aa10.66□□□□□ -0.7
PHGDH-222ENST00000641587 OR5B17Q8NGF7 314 aa10.66□□□□□ -0.7
PHGDH-222ENST00000641587 HMGB4Q8WW32 186 aa10.66□□□□□ -0.7
PHGDH-222ENST00000641587 HVCN1Q96D96 273 aa10.66□□□□□ -0.7
PHGDH-222ENST00000641587 DHTKD1Q96HY7 919 aaPredicted RBP10.66□□□□□ -0.7
PHGDH-222ENST00000641587 FUBP3Q96I24 572 aaKnown RBP eCLIP10.66□□□□□ -0.7
PHGDH-222ENST00000641587 TSG101Q99816 390 aa10.66□□□□□ -0.7
PHGDH-222ENST00000641587 CBX8Q9HC52 389 aa10.66□□□□□ -0.7
PHGDH-222ENST00000641587 TMEM30AQ9NV96 361 aa10.66□□□□□ -0.7
PHGDH-222ENST00000641587 GDAP2Q9NXN4 497 aa10.66□□□□□ -0.7
PHGDH-222ENST00000641587 ITGA11Q9UKX5 1188 aa10.66□□□□□ -0.7
PHGDH-222ENST00000641587 PCDHB13Q9Y5F0 798 aa10.66□□□□□ -0.7
PHGDH-222ENST00000641587 CPQQ9Y646 472 aa10.66□□□□□ -0.7
PHGDH-222ENST00000641587 PKD1L2Q7Z442 2459 aa10.66□□□□□ -0.7
PHGDH-222ENST00000641587 BICDL2A1A5D9 508 aa10.65□□□□□ -0.7
PHGDH-222ENST00000641587 SMTNL1A8MU46 457 aa10.65□□□□□ -0.7
PHGDH-222ENST00000641587 ADAM23O75077 832 aa10.65□□□□□ -0.7
PHGDH-222ENST00000641587 ABL1P00519 1130 aa10.65□□□□□ -0.7
PHGDH-222ENST00000641587 PDGFRBP09619 1106 aa10.65□□□□□ -0.7
PHGDH-222ENST00000641587 TMEM191BP0C7N4 346 aa10.65□□□□□ -0.7
PHGDH-222ENST00000641587 ENGP17813 658 aa10.65□□□□□ -0.7
PHGDH-222ENST00000641587 ITPKAP23677 461 aa10.65□□□□□ -0.7
PHGDH-222ENST00000641587 ERCC5P28715 1186 aaPredicted RBP10.65□□□□□ -0.7
PHGDH-222ENST00000641587 ABCD1P33897 745 aa10.65□□□□□ -0.7
PHGDH-222ENST00000641587 GRIK1P39086 918 aa10.65□□□□□ -0.7
PHGDH-222ENST00000641587 MAGEA11P43364 429 aa10.65□□□□□ -0.7
PHGDH-222ENST00000641587 LHX1P48742 406 aa10.65□□□□□ -0.7
PHGDH-222ENST00000641587 TPM4P67936 248 aa10.65□□□□□ -0.7
PHGDH-222ENST00000641587 FAM193AP78312 1265 aa10.65□□□□□ -0.7
PHGDH-222ENST00000641587 MRPS21P82921 87 aaKnown RBP10.65□□□□□ -0.7
PHGDH-222ENST00000641587 MYL5Q02045 173 aa10.65□□□□□ -0.7
PHGDH-222ENST00000641587 CYP27A1Q02318 531 aa10.65□□□□□ -0.7
PHGDH-222ENST00000641587 RING1Q06587 406 aa10.65□□□□□ -0.7
PHGDH-222ENST00000641587 IFRD2Q12894 506 aaPredicted RBP10.65□□□□□ -0.7
PHGDH-222ENST00000641587 GSE1Q14687 1217 aa10.65□□□□□ -0.7
PHGDH-222ENST00000641587 MAP7D1Q3KQU3 841 aa10.65□□□□□ -0.7
PHGDH-222ENST00000641587 COBLL1Q53SF7 1204 aa10.65□□□□□ -0.7
PHGDH-222ENST00000641587 CT47A1Q5JQC4 288 aaPredicted RBP10.65□□□□□ -0.7
PHGDH-222ENST00000641587 DENND5BQ6ZUT9 1274 aa10.65□□□□□ -0.7
PHGDH-222ENST00000641587 LPCAT2Q7L5N7 544 aa10.65□□□□□ -0.7
PHGDH-222ENST00000641587 LUZP1Q86V48 1076 aa10.65□□□□□ -0.7
PHGDH-222ENST00000641587 OR2I1PQ8NGU4 316 aa10.65□□□□□ -0.7
PHGDH-222ENST00000641587 CACTINQ8WUQ7 758 aaKnown RBP10.65□□□□□ -0.7
PHGDH-222ENST00000641587 SCFD1Q8WVM8 642 aa10.65□□□□□ -0.7
PHGDH-222ENST00000641587 ERLEC1Q96DZ1 483 aa10.65□□□□□ -0.7
PHGDH-222ENST00000641587 PCED1BQ96HM7 432 aa10.65□□□□□ -0.7
PHGDH-222ENST00000641587 ACCSQ96QU6 501 aa10.65□□□□□ -0.7
PHGDH-222ENST00000641587 RBSNQ9H1K0 784 aa10.65□□□□□ -0.7
PHGDH-222ENST00000641587 TRPM5Q9NZQ8 1165 aa10.65□□□□□ -0.7
PHGDH-222ENST00000641587 BCCIPQ9P287 314 aaKnown RBP eCLIP10.65□□□□□ -0.7
PHGDH-222ENST00000641587 CFAP97Q9P2B7 532 aa10.65□□□□□ -0.7
PHGDH-222ENST00000641587 MAGEC2Q9UBF1 373 aaPredicted RBP10.65□□□□□ -0.7
PHGDH-222ENST00000641587 EVLQ9UI08 416 aaPredicted RBP10.65□□□□□ -0.7
PHGDH-222ENST00000641587 RWDD2AQ9UIY3 292 aa10.65□□□□□ -0.7
PHGDH-222ENST00000641587 PCDH15Q96QU1 1955 aa10.65□□□□□ -0.71
PHGDH-222ENST00000641587 TCRBV21S2A2A0A5A6 115 aa10.64□□□□□ -0.71
PHGDH-222ENST00000641587 TRIM49BA6NDI0 452 aa10.64□□□□□ -0.71
PHGDH-222ENST00000641587 ZNF840PA6NDX5 716 aa10.64□□□□□ -0.71
PHGDH-222ENST00000641587 F8VP50 259 aa10.64□□□□□ -0.71
PHGDH-222ENST00000641587 MAP3K13O43283 966 aa10.64□□□□□ -0.71
PHGDH-222ENST00000641587 ALDH1A2O94788 518 aa10.64□□□□□ -0.71
PHGDH-222ENST00000641587 KAT7O95251 611 aa10.64□□□□□ -0.71
PHGDH-222ENST00000641587 OLFM2O95897 454 aa10.64□□□□□ -0.71
PHGDH-222ENST00000641587 OAS1P00973 400 aaKnown RBP10.64□□□□□ -0.71
PHGDH-222ENST00000641587 CFIP05156 583 aa10.64□□□□□ -0.71
PHGDH-222ENST00000641587 GARTP22102 1010 aa10.64□□□□□ -0.71
PHGDH-222ENST00000641587 KIR2DL1P43626 348 aaPredicted RBP10.64□□□□□ -0.71
PHGDH-222ENST00000641587 SIM1P81133 766 aaPredicted RBP10.64□□□□□ -0.71
PHGDH-222ENST00000641587 SLC7A9P82251 487 aa10.64□□□□□ -0.71
PHGDH-222ENST00000641587 RBP5P82980 135 aa10.64□□□□□ -0.71
PHGDH-222ENST00000641587 MDH1BQ5I0G3 518 aa10.64□□□□□ -0.71
PHGDH-222ENST00000641587 RHBDF2Q6PJF5 856 aa10.64□□□□□ -0.71
PHGDH-222ENST00000641587 C4orf50Q6ZRC1 276 aa10.64□□□□□ -0.71
PHGDH-222ENST00000641587 EPM2AIP1Q7L775 607 aaPredicted RBP10.64□□□□□ -0.71
PHGDH-222ENST00000641587 LIMS2Q7Z4I7 341 aa10.64□□□□□ -0.71
PHGDH-222ENST00000641587 SYT12Q8IV01 421 aa10.64□□□□□ -0.71
PHGDH-222ENST00000641587 ADGRG2Q8IZP9 1017 aa10.64□□□□□ -0.71
PHGDH-222ENST00000641587 PGBD3Q8N328 593 aa10.64□□□□□ -0.71
PHGDH-222ENST00000641587 PHTF2Q8N3S3 785 aa10.64□□□□□ -0.71
PHGDH-222ENST00000641587 NAT16Q8N8M0 369 aa10.64□□□□□ -0.71
PHGDH-222ENST00000641587 SPATA18Q8TC71 538 aa10.64□□□□□ -0.71
PHGDH-222ENST00000641587 WHAMMQ8TF30 809 aa10.64□□□□□ -0.71
PHGDH-222ENST00000641587 HPDLQ96IR7 371 aa10.64□□□□□ -0.71
PHGDH-222ENST00000641587 SPACA7Q96KW9 195 aa10.64□□□□□ -0.71
PHGDH-222ENST00000641587 SPATA17Q96L03 361 aa10.64□□□□□ -0.71
PHGDH-222ENST00000641587 PNKPQ96T60 521 aa10.64□□□□□ -0.71
PHGDH-222ENST00000641587 BPIFA3Q9BQP9 254 aa10.64□□□□□ -0.71
PHGDH-222ENST00000641587 MRPL45Q9BRJ2 306 aaKnown RBP10.64□□□□□ -0.71
PHGDH-222ENST00000641587 TTLL2Q9BWV7 592 aa10.64□□□□□ -0.71
PHGDH-222ENST00000641587 GTPBP2Q9BX10 602 aaKnown RBP10.64□□□□□ -0.71
PHGDH-222ENST00000641587 NUSAP1Q9BXS6 441 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms