RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 TNPO1Q92973 898 aaKnown RBP5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 USP13Q92995 863 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 MUL1Q969V5 352 aa5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 ZSCAN31Q96LW9 406 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 ZSWIM3Q96MP5 696 aa5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 PACSIN1Q9BY11 444 aa5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 OR10A2Q9H208 303 aa5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 SLC6A15Q9H2J7 730 aa5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 UNC45AQ9H3U1 944 aa5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 UBE2ZQ9H832 354 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 BRD9Q9H8M2 597 aa5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 AS3MTQ9HBK9 375 aa5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 NECTIN3Q9NQS3 549 aa5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 USP40Q9NVE5 1235 aa5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 DACT1Q9NYF0 836 aa5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 COL20A1Q9P218 1284 aa5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 MAGEL2Q9UJ55 1249 aa5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 FBXO9Q9UK97 447 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 CDC42EP3Q9UKI2 254 aa5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 SCINQ9Y6U3 715 aa5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 GAKO14976 1311 aa5.4□□□□□ -1.55
HMGB1P23-201ENST00000518743 DOPEY1Q5JWR5 2465 aa5.39□□□□□ -1.55
HMGB1P23-201ENST00000518743 CEP295Q9C0D2 2601 aa5.39□□□□□ -1.55
HMGB1P23-201ENST00000518743 DNM1LO00429 736 aa5.39□□□□□ -1.55
HMGB1P23-201ENST00000518743 SYT5O00445 386 aa5.39□□□□□ -1.55
HMGB1P23-201ENST00000518743 EPB41L2O43491 1005 aaKnown RBP5.39□□□□□ -1.55
HMGB1P23-201ENST00000518743 CHEK2O96017 543 aa5.39□□□□□ -1.55
HMGB1P23-201ENST00000518743 CENPBP07199 599 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P23-201ENST00000518743 CLTBP09497 229 aa5.39□□□□□ -1.55
HMGB1P23-201ENST00000518743 NBL1P41271 181 aa5.39□□□□□ -1.55
HMGB1P23-201ENST00000518743 RABGGTBP53611 331 aa5.39□□□□□ -1.55
HMGB1P23-201ENST00000518743 VCPP55072 806 aaKnown RBP5.39□□□□□ -1.55
HMGB1P23-201ENST00000518743 SATB1Q01826 763 aa5.39□□□□□ -1.55
HMGB1P23-201ENST00000518743 SMAD4Q13485 552 aaKnown RBP5.39□□□□□ -1.55
HMGB1P23-201ENST00000518743 TNFAIP1Q13829 316 aa5.39□□□□□ -1.55
HMGB1P23-201ENST00000518743 TAF12Q16514 161 aa5.39□□□□□ -1.55
HMGB1P23-201ENST00000518743 TUBB8Q3ZCM7 444 aa5.39□□□□□ -1.55
HMGB1P23-201ENST00000518743 PARP10Q53GL7 1025 aa5.39□□□□□ -1.55
HMGB1P23-201ENST00000518743 FAM47AQ5JRC9 791 aa5.39□□□□□ -1.55
HMGB1P23-201ENST00000518743 PPP1R3BQ86XI6 285 aa5.39□□□□□ -1.55
HMGB1P23-201ENST00000518743 YAF2Q8IY57 180 aa5.39□□□□□ -1.55
HMGB1P23-201ENST00000518743 CACNA2D3Q8IZS8 1091 aa5.39□□□□□ -1.55
HMGB1P23-201ENST00000518743 ANKRD13CQ8N6S4 541 aa5.39□□□□□ -1.55
HMGB1P23-201ENST00000518743 FNIP1Q8TF40 1166 aa5.39□□□□□ -1.55
HMGB1P23-201ENST00000518743 CELF1Q92879 486 aaKnown RBP5.39□□□□□ -1.55
HMGB1P23-201ENST00000518743 ZBTB8AQ96BR9 441 aa5.39□□□□□ -1.55
HMGB1P23-201ENST00000518743 MOGAT1Q96PD6 335 aa5.39□□□□□ -1.55
HMGB1P23-201ENST00000518743 PPP1R16BQ96T49 567 aa5.39□□□□□ -1.55
HMGB1P23-201ENST00000518743 MAGEB5Q9BZ81 275 aa5.39□□□□□ -1.55
HMGB1P23-201ENST00000518743 KATNBL1Q9H079 304 aa5.39□□□□□ -1.55
HMGB1P23-201ENST00000518743 MTIF3Q9H2K0 278 aaKnown RBP5.39□□□□□ -1.55
HMGB1P23-201ENST00000518743 BARX1Q9HBU1 254 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P23-201ENST00000518743 TMEM8AQ9HCN3 771 aa5.39□□□□□ -1.55
HMGB1P23-201ENST00000518743 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P23-201ENST00000518743 PDP2Q9P2J9 529 aa5.39□□□□□ -1.55
HMGB1P23-201ENST00000518743 GJD2Q9UKL4 321 aa5.39□□□□□ -1.55
HMGB1P23-201ENST00000518743 FAM184BQ9ULE4 1060 aa5.39□□□□□ -1.55
HMGB1P23-201ENST00000518743 SLC39A10Q9ULF5 831 aa5.39□□□□□ -1.55
HMGB1P23-201ENST00000518743 PLEKHM1Q9Y4G2 1056 aa5.39□□□□□ -1.55
HMGB1P23-201ENST00000518743 CTDP1Q9Y5B0 961 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P23-201ENST00000518743 SLC4A7Q9Y6M7 1214 aa5.39□□□□□ -1.55
HMGB1P23-201ENST00000518743 MAP3K15Q6ZN16 1313 aa5.39□□□□□ -1.55
HMGB1P23-201ENST00000518743 COL4A1P02462 1669 aa5.38□□□□□ -1.55
HMGB1P23-201ENST00000518743 ERVV-1B6SEH8 477 aa5.38□□□□□ -1.55
HMGB1P23-201ENST00000518743 PJA2O43164 708 aa5.38□□□□□ -1.55
HMGB1P23-201ENST00000518743 MT-ND5P03915 603 aa5.38□□□□□ -1.55
HMGB1P23-201ENST00000518743 SNRPA1P09661 255 aaKnown RBP5.38□□□□□ -1.55
HMGB1P23-201ENST00000518743 RARBP10826 455 aa5.38□□□□□ -1.55
HMGB1P23-201ENST00000518743 ATF2P15336 505 aa5.38□□□□□ -1.55
HMGB1P23-201ENST00000518743 ITGB5P18084 799 aa5.38□□□□□ -1.55
HMGB1P23-201ENST00000518743 IGFBP6P24592 240 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P23-201ENST00000518743 IL13P35225 146 aa5.38□□□□□ -1.55
HMGB1P23-201ENST00000518743 MC3RP41968 323 aa5.38□□□□□ -1.55
HMGB1P23-201ENST00000518743 MMP14P50281 582 aa5.38□□□□□ -1.55
HMGB1P23-201ENST00000518743 RPS16P62249 146 aaKnown RBP5.38□□□□□ -1.55
HMGB1P23-201ENST00000518743 TLE2Q04725 743 aa5.38□□□□□ -1.55
HMGB1P23-201ENST00000518743 PFKFB4Q16877 469 aa5.38□□□□□ -1.55
HMGB1P23-201ENST00000518743 LEXMQ3ZCV2 418 aa5.38□□□□□ -1.55
HMGB1P23-201ENST00000518743 FYB2Q5VWT5 728 aa5.38□□□□□ -1.55
HMGB1P23-201ENST00000518743 MZT2AQ6P582 158 aa5.38□□□□□ -1.55
HMGB1P23-201ENST00000518743 PRR23BQ6ZRT6 265 aa5.38□□□□□ -1.55
HMGB1P23-201ENST00000518743 SEM1Q6ZVN7 128 aa5.38□□□□□ -1.55
HMGB1P23-201ENST00000518743 GALNT15Q8N3T1 639 aa5.38□□□□□ -1.55
HMGB1P23-201ENST00000518743 ZGPATQ8N5A5 531 aaKnown RBP5.38□□□□□ -1.55
HMGB1P23-201ENST00000518743 GIMAP8Q8ND71 665 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P23-201ENST00000518743 OR10H5Q8NGA6 315 aa5.38□□□□□ -1.55
HMGB1P23-201ENST00000518743 ARNTL2Q8WYA1 636 aa5.38□□□□□ -1.55
HMGB1P23-201ENST00000518743 EDAQ92838 391 aa5.38□□□□□ -1.55
HMGB1P23-201ENST00000518743 RAB24Q969Q5 203 aa5.38□□□□□ -1.55
HMGB1P23-201ENST00000518743 SKA1Q96BD8 255 aa5.38□□□□□ -1.55
HMGB1P23-201ENST00000518743 TBC1D20Q96BZ9 403 aa5.38□□□□□ -1.55
HMGB1P23-201ENST00000518743 AJUBAQ96IF1 538 aa5.38□□□□□ -1.55
HMGB1P23-201ENST00000518743 PPM1MQ96MI6 270 aa5.38□□□□□ -1.55
HMGB1P23-201ENST00000518743 HNRNPABQ99729 332 aaKnown RBP5.38□□□□□ -1.55
HMGB1P23-201ENST00000518743 EPB41L4BQ9H329 900 aa5.38□□□□□ -1.55
HMGB1P23-201ENST00000518743 ZSCAN32Q9NX65 697 aa5.38□□□□□ -1.55
HMGB1P23-201ENST00000518743 POLKQ9UBT6 870 aa5.38□□□□□ -1.55
HMGB1P23-201ENST00000518743 ZNF212Q9UDV6 495 aa5.38□□□□□ -1.55
HMGB1P23-201ENST00000518743 GPR52Q9Y2T5 361 aa5.38□□□□□ -1.55
HMGB1P23-201ENST00000518743 RBM8AQ9Y5S9 174 aaKnown RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms