RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 SELENOOQ9BVL4 669 aa5.76□□□□□ -1.49
HMGB1P38-201ENST00000490557 PCDHAC1Q9H158 963 aa5.76□□□□□ -1.49
HMGB1P38-201ENST00000490557 KLK15Q9H2R5 256 aa5.76□□□□□ -1.49
HMGB1P38-201ENST00000490557 TRIM36Q9NQ86 728 aa5.76□□□□□ -1.49
HMGB1P38-201ENST00000490557 SNX15Q9NRS6 342 aa5.76□□□□□ -1.49
HMGB1P38-201ENST00000490557 SLC52A1Q9NWF4 448 aa5.76□□□□□ -1.49
HMGB1P38-201ENST00000490557 TFCP2L1Q9NZI6 479 aa5.76□□□□□ -1.49
HMGB1P38-201ENST00000490557 AMFRQ9UKV5 643 aa5.76□□□□□ -1.49
HMGB1P38-201ENST00000490557 WNT6Q9Y6F9 365 aa5.76□□□□□ -1.49
HMGB1P38-201ENST00000490557 FAM234BA2RU67 622 aa5.75□□□□□ -1.49
HMGB1P38-201ENST00000490557 PMPCBO75439 489 aa5.75□□□□□ -1.49
HMGB1P38-201ENST00000490557 HNRNPCP07910 306 aaKnown RBP eCLIP5.75□□□□□ -1.49
HMGB1P38-201ENST00000490557 CREB1P16220 341 aa5.75□□□□□ -1.49
HMGB1P38-201ENST00000490557 PCSK6P29122 969 aa5.75□□□□□ -1.49
HMGB1P38-201ENST00000490557 CTGFP29279 349 aa5.75□□□□□ -1.49
HMGB1P38-201ENST00000490557 PPM1AP35813 382 aa5.75□□□□□ -1.49
HMGB1P38-201ENST00000490557 ST3GAL2Q16842 350 aa5.75□□□□□ -1.49
HMGB1P38-201ENST00000490557 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.75□□□□□ -1.49
HMGB1P38-201ENST00000490557 CEP85Q6P2H3 762 aa5.75□□□□□ -1.49
HMGB1P38-201ENST00000490557 TOGARAM2Q6ZUX3 1019 aa5.75□□□□□ -1.49
HMGB1P38-201ENST00000490557 AMIGO2Q86SJ2 522 aa5.75□□□□□ -1.49
HMGB1P38-201ENST00000490557 SKAP1Q86WV1 359 aa5.75□□□□□ -1.49
HMGB1P38-201ENST00000490557 KRT73Q86Y46 540 aa5.75□□□□□ -1.49
HMGB1P38-201ENST00000490557 MYLK4Q86YV6 388 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P38-201ENST00000490557 CCDC28AQ8IWP9 274 aa5.75□□□□□ -1.49
HMGB1P38-201ENST00000490557 VPS37AQ8NEZ2 397 aa5.75□□□□□ -1.49
HMGB1P38-201ENST00000490557 MBD3L2Q8NHZ7 208 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P38-201ENST00000490557 NELL1Q92832 810 aa5.75□□□□□ -1.49
HMGB1P38-201ENST00000490557 ZDHHC12Q96GR4 267 aa5.75□□□□□ -1.49
HMGB1P38-201ENST00000490557 PRR25Q96S07 402 aa5.75□□□□□ -1.49
HMGB1P38-201ENST00000490557 TIMP4Q99727 224 aa5.75□□□□□ -1.49
HMGB1P38-201ENST00000490557 TM7SF3Q9NS93 570 aa5.75□□□□□ -1.49
HMGB1P38-201ENST00000490557 RGL1Q9NZL6 768 aa5.75□□□□□ -1.49
HMGB1P38-201ENST00000490557 CDC23Q9UJX2 597 aa5.75□□□□□ -1.49
HMGB1P38-201ENST00000490557 SLC39A10Q9ULF5 831 aa5.75□□□□□ -1.49
HMGB1P38-201ENST00000490557 RIMKLBQ9ULI2 386 aa5.75□□□□□ -1.49
HMGB1P38-201ENST00000490557 ZMYND8Q9ULU4 1186 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P38-201ENST00000490557 GABRQQ9UN88 632 aa5.75□□□□□ -1.49
HMGB1P38-201ENST00000490557 COMMD10Q9Y6G5 202 aa5.75□□□□□ -1.49
HMGB1P38-201ENST00000490557 A0A087WZ62 844 aa5.74□□□□□ -1.49
HMGB1P38-201ENST00000490557 M0R3H8 397 aa5.74□□□□□ -1.49
HMGB1P38-201ENST00000490557 ADAMTS3O15072 1205 aa5.74□□□□□ -1.49
HMGB1P38-201ENST00000490557 PEX14O75381 377 aa5.74□□□□□ -1.49
HMGB1P38-201ENST00000490557 SERPINB3P29508 390 aa5.74□□□□□ -1.49
HMGB1P38-201ENST00000490557 ELLP55199 621 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P38-201ENST00000490557 CLCA4Q14CN2 919 aa5.74□□□□□ -1.49
HMGB1P38-201ENST00000490557 NAPRTQ6XQN6 538 aa5.74□□□□□ -1.49
HMGB1P38-201ENST00000490557 TTC30AQ86WT1 665 aa5.74□□□□□ -1.49
HMGB1P38-201ENST00000490557 P3H2Q8IVL5 708 aa5.74□□□□□ -1.49
HMGB1P38-201ENST00000490557 BOLLQ8N9W6 283 aaKnown RBP5.74□□□□□ -1.49
HMGB1P38-201ENST00000490557 GLIS1Q8NBF1 620 aa5.74□□□□□ -1.49
HMGB1P38-201ENST00000490557 RPS6KC1Q96S38 1066 aa5.74□□□□□ -1.49
HMGB1P38-201ENST00000490557 FSD1LQ9BXM9 530 aa5.74□□□□□ -1.49
HMGB1P38-201ENST00000490557 SYNPO2LQ9H987 977 aa5.74□□□□□ -1.49
HMGB1P38-201ENST00000490557 AS3MTQ9HBK9 375 aa5.74□□□□□ -1.49
HMGB1P38-201ENST00000490557 PLCB1Q9NQ66 1216 aa5.74□□□□□ -1.49
HMGB1P38-201ENST00000490557 SH3BP4Q9P0V3 963 aa5.74□□□□□ -1.49
HMGB1P38-201ENST00000490557 MGAT4CQ9UBM8 478 aa5.74□□□□□ -1.49
HMGB1P38-201ENST00000490557 SLC27A6Q9Y2P4 619 aa5.74□□□□□ -1.49
HMGB1P38-201ENST00000490557 FER1L4A9Z1Z3 1794 aa5.73□□□□□ -1.49
HMGB1P38-201ENST00000490557 AGPSO00116 658 aa5.73□□□□□ -1.49
HMGB1P38-201ENST00000490557 ZSCAN9O15535 394 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P38-201ENST00000490557 KCNQ3O43525 872 aa5.73□□□□□ -1.49
HMGB1P38-201ENST00000490557 TMPRSS11DO60235 418 aa5.73□□□□□ -1.49
HMGB1P38-201ENST00000490557 JTBO76095 146 aa5.73□□□□□ -1.49
HMGB1P38-201ENST00000490557 PDE8BO95263 885 aa5.73□□□□□ -1.49
HMGB1P38-201ENST00000490557 VIPP01282 170 aa5.73□□□□□ -1.49
HMGB1P38-201ENST00000490557 SRGAP2BP0DMP2 458 aa5.73□□□□□ -1.49
HMGB1P38-201ENST00000490557 TMEM225BP0DP42 221 aa5.73□□□□□ -1.49
HMGB1P38-201ENST00000490557 MYCLP12524 364 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P38-201ENST00000490557 EGR1P18146 543 aa5.73□□□□□ -1.49
HMGB1P38-201ENST00000490557 GABRB3P28472 473 aa5.73□□□□□ -1.49
HMGB1P38-201ENST00000490557 INHBEP58166 350 aa5.73□□□□□ -1.49
HMGB1P38-201ENST00000490557 EIF4A1P60842 406 aaKnown RBP5.73□□□□□ -1.49
HMGB1P38-201ENST00000490557 COL10A1Q03692 680 aa5.73□□□□□ -1.49
HMGB1P38-201ENST00000490557 NSUN2Q08J23 767 aaKnown RBP eCLIP5.73□□□□□ -1.49
HMGB1P38-201ENST00000490557 MORC3Q14149 939 aa5.73□□□□□ -1.49
HMGB1P38-201ENST00000490557 MAPKAPK3Q16644 382 aa5.73□□□□□ -1.49
HMGB1P38-201ENST00000490557 CYP1B1Q16678 543 aa5.73□□□□□ -1.49
HMGB1P38-201ENST00000490557 SUMO4Q6EEV6 95 aa5.73□□□□□ -1.49
HMGB1P38-201ENST00000490557 PTCHD4Q6ZW05 846 aa5.73□□□□□ -1.49
HMGB1P38-201ENST00000490557 USP49Q70CQ1 688 aa5.73□□□□□ -1.49
HMGB1P38-201ENST00000490557 DAZAP1Q96EP5 407 aaKnown RBP5.73□□□□□ -1.49
HMGB1P38-201ENST00000490557 TMEM41AQ96HV5 264 aa5.73□□□□□ -1.49
HMGB1P38-201ENST00000490557 SEMA4GQ9NTN9 838 aa5.73□□□□□ -1.49
HMGB1P38-201ENST00000490557 KAT6AQ92794 2004 aa5.73□□□□□ -1.49
HMGB1P38-201ENST00000490557 SPATA31A6Q5VVP1 1343 aa5.73□□□□□ -1.49
HMGB1P38-201ENST00000490557 A8MVJ9 347 aa5.72□□□□□ -1.49
HMGB1P38-201ENST00000490557 F5H423 210 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P38-201ENST00000490557 EXOC3O60645 756 aa5.72□□□□□ -1.49
HMGB1P38-201ENST00000490557 PLA2G6O60733 806 aa5.72□□□□□ -1.49
HMGB1P38-201ENST00000490557 PPFIA2O75334 1257 aa5.72□□□□□ -1.49
HMGB1P38-201ENST00000490557 TJP3O95049 919 aa5.72□□□□□ -1.49
HMGB1P38-201ENST00000490557 WT1P19544 449 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P38-201ENST00000490557 MST1P26927 711 aa5.72□□□□□ -1.49
HMGB1P38-201ENST00000490557 SLC5A2P31639 672 aa5.72□□□□□ -1.49
HMGB1P38-201ENST00000490557 PTH2RP49190 550 aa5.72□□□□□ -1.49
HMGB1P38-201ENST00000490557 TNFAIP2Q03169 654 aa5.72□□□□□ -1.49
HMGB1P38-201ENST00000490557 SLC5A9Q2M3M2 681 aa5.72□□□□□ -1.49
HMGB1P38-201ENST00000490557 P3H1Q32P28 736 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms