RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 TSPAN16Q9UKR8 245 aa16.72■□□□□ 0.27
GABPA-203ENST00000487266 RIF1Q5UIP0 2472 aaKnown RBP16.72■□□□□ 0.27
GABPA-203ENST00000487266 RNF40O75150 1001 aa16.71■□□□□ 0.27
GABPA-203ENST00000487266 OPRD1P41143 372 aa16.71■□□□□ 0.27
GABPA-203ENST00000487266 CXCL12P48061 93 aa16.71■□□□□ 0.27
GABPA-203ENST00000487266 MARSP56192 900 aaKnown RBP16.71■□□□□ 0.27
GABPA-203ENST00000487266 GRSF1Q12849 480 aaKnown RBP eCLIP16.71■□□□□ 0.27
GABPA-203ENST00000487266 DPCR1Q3MIW9 517 aa16.71■□□□□ 0.27
GABPA-203ENST00000487266 TMEM270Q6UE05 265 aa16.71■□□□□ 0.27
GABPA-203ENST00000487266 SCD5Q86SK9 330 aa16.71■□□□□ 0.27
GABPA-203ENST00000487266 C12orf40Q86WS4 652 aa16.71■□□□□ 0.27
GABPA-203ENST00000487266 CREBRFQ8IUR6 639 aa16.71■□□□□ 0.27
GABPA-203ENST00000487266 SFTPA1Q8IWL2 248 aa16.71■□□□□ 0.27
GABPA-203ENST00000487266 BBS7Q8IWZ6 715 aa16.71■□□□□ 0.27
GABPA-203ENST00000487266 SPEM1Q8N4L4 309 aa16.71■□□□□ 0.27
GABPA-203ENST00000487266 TTC39CQ8N584 583 aa16.71■□□□□ 0.27
GABPA-203ENST00000487266 TFAP2BQ92481 460 aa16.71■□□□□ 0.27
GABPA-203ENST00000487266 CD101Q93033 1021 aa16.71■□□□□ 0.27
GABPA-203ENST00000487266 CNOT6LQ96LI5 555 aaKnown RBP16.71■□□□□ 0.27
GABPA-203ENST00000487266 ZSWIM1Q9BR11 485 aa16.71■□□□□ 0.27
GABPA-203ENST00000487266 IER2Q9BTL4 223 aa16.71■□□□□ 0.27
GABPA-203ENST00000487266 PNPLA8Q9NP80 782 aa16.71■□□□□ 0.27
GABPA-203ENST00000487266 LMBRD1Q9NUN5 540 aa16.71■□□□□ 0.27
GABPA-203ENST00000487266 ZSCAN32Q9NX65 697 aa16.71■□□□□ 0.27
GABPA-203ENST00000487266 RWDD2AQ9UIY3 292 aa16.71■□□□□ 0.27
GABPA-203ENST00000487266 NAGPAQ9UK23 515 aa16.71■□□□□ 0.27
GABPA-203ENST00000487266 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.71■□□□□ 0.27
GABPA-203ENST00000487266 GPR179Q6PRD1 2367 aa16.71■□□□□ 0.26
GABPA-203ENST00000487266 FRYLO94915 3013 aa16.7■□□□□ 0.26
GABPA-203ENST00000487266 K7ESF4 209 aa16.7■□□□□ 0.26
GABPA-203ENST00000487266 RNF225M0QZC1 329 aaPredicted RBP16.7■□□□□ 0.26
GABPA-203ENST00000487266 PMM2O15305 246 aa16.7■□□□□ 0.26
GABPA-203ENST00000487266 AFPP02771 609 aaKnown RBP16.7■□□□□ 0.26
GABPA-203ENST00000487266 TBXAS1P24557 533 aaPredicted RBP16.7■□□□□ 0.26
GABPA-203ENST00000487266 PDE4CQ08493 712 aa16.7■□□□□ 0.26
GABPA-203ENST00000487266 MESP2Q0VG99 397 aa16.7■□□□□ 0.26
GABPA-203ENST00000487266 DHCR24Q15392 516 aa16.7■□□□□ 0.26
GABPA-203ENST00000487266 HEATR6Q6AI08 1181 aaKnown RBP16.7■□□□□ 0.26
GABPA-203ENST00000487266 ZBTB44Q8NCP5 570 aa16.7■□□□□ 0.26
GABPA-203ENST00000487266 UBA3Q8TBC4 463 aa16.7■□□□□ 0.26
GABPA-203ENST00000487266 NDRG1Q92597 394 aaKnown RBP16.7■□□□□ 0.26
GABPA-203ENST00000487266 DNAI2Q9GZS0 605 aa16.7■□□□□ 0.26
GABPA-203ENST00000487266 INTS2Q9H0H0 1204 aaKnown RBP16.7■□□□□ 0.26
GABPA-203ENST00000487266 NUP62CLQ9H1M0 184 aa16.7■□□□□ 0.26
GABPA-203ENST00000487266 CYLDQ9NQC7 956 aa16.7■□□□□ 0.26
GABPA-203ENST00000487266 SH3BP1Q9Y3L3 701 aa16.7■□□□□ 0.26
GABPA-203ENST00000487266 PCDHB4Q9Y5E5 795 aa16.7■□□□□ 0.26
GABPA-203ENST00000487266 EML5Q05BV3 1969 aa16.69■□□□□ 0.26
GABPA-203ENST00000487266 O00370 1275 aa16.69■□□□□ 0.26
GABPA-203ENST00000487266 GNA14O95837 355 aa16.69■□□□□ 0.26
GABPA-203ENST00000487266 LMNAP02545 664 aaKnown RBP16.69■□□□□ 0.26
GABPA-203ENST00000487266 CCDC192P0DO97 292 aa16.69■□□□□ 0.26
GABPA-203ENST00000487266 RARGP13631 454 aa16.69■□□□□ 0.26
GABPA-203ENST00000487266 SLC6A11P48066 632 aa16.69■□□□□ 0.26
GABPA-203ENST00000487266 YWHAEP62258 255 aaKnown RBP16.69■□□□□ 0.26
GABPA-203ENST00000487266 APBA1Q02410 837 aa16.69■□□□□ 0.26
GABPA-203ENST00000487266 SGO2Q562F6 1265 aa16.69■□□□□ 0.26
GABPA-203ENST00000487266 RHBDF2Q6PJF5 856 aa16.69■□□□□ 0.26
GABPA-203ENST00000487266 CCDC186Q7Z3E2 898 aa16.69■□□□□ 0.26
GABPA-203ENST00000487266 DDX42Q86XP3 938 aaKnown RBP eCLIP16.69■□□□□ 0.26
GABPA-203ENST00000487266 IRF2BP1Q8IU81 584 aa16.69■□□□□ 0.26
GABPA-203ENST00000487266 ADGRG2Q8IZP9 1017 aa16.69■□□□□ 0.26
GABPA-203ENST00000487266 ANKRD52Q8NB46 1076 aa16.69■□□□□ 0.26
GABPA-203ENST00000487266 ATRIPQ8WXE1 791 aa16.69■□□□□ 0.26
GABPA-203ENST00000487266 KREMEN1Q96MU8 473 aa16.69■□□□□ 0.26
GABPA-203ENST00000487266 KLF16Q9BXK1 252 aaPredicted RBP16.69■□□□□ 0.26
GABPA-203ENST00000487266 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.69■□□□□ 0.26
GABPA-203ENST00000487266 PCDHGA2Q9Y5H1 932 aa16.69■□□□□ 0.26
GABPA-203ENST00000487266 USP3Q9Y6I4 520 aa16.69■□□□□ 0.26
GABPA-203ENST00000487266 PTPRZ1P23471 2315 aaPredicted RBP16.69■□□□□ 0.26
GABPA-203ENST00000487266 OTOGLQ3ZCN5 2332 aa16.69■□□□□ 0.26
GABPA-203ENST00000487266 E2F8A0AVK6 867 aa16.68■□□□□ 0.26
GABPA-203ENST00000487266 CHURC1-FNTBB4DL54 471 aa16.68■□□□□ 0.26
GABPA-203ENST00000487266 P4HA2O15460 535 aa16.68■□□□□ 0.26
GABPA-203ENST00000487266 GREM1O60565 184 aa16.68■□□□□ 0.26
GABPA-203ENST00000487266 LILRB5O75023 590 aa16.68■□□□□ 0.26
GABPA-203ENST00000487266 DRD1P21728 446 aa16.68■□□□□ 0.26
GABPA-203ENST00000487266 BRD2P25440 801 aaKnown RBP16.68■□□□□ 0.26
GABPA-203ENST00000487266 PXNP49023 591 aaPredicted RBP16.68■□□□□ 0.26
GABPA-203ENST00000487266 FNTBP49356 437 aa16.68■□□□□ 0.26
GABPA-203ENST00000487266 TKTL1P51854 596 aa16.68■□□□□ 0.26
GABPA-203ENST00000487266 BCAT1P54687 386 aa16.68■□□□□ 0.26
GABPA-203ENST00000487266 SEC13P55735 322 aa16.68■□□□□ 0.26
GABPA-203ENST00000487266 AMPD2Q01433 879 aa16.68■□□□□ 0.26
GABPA-203ENST00000487266 KDSRQ06136 332 aa16.68■□□□□ 0.26
GABPA-203ENST00000487266 SRSF5Q13243 272 aaKnown RBP16.68■□□□□ 0.26
GABPA-203ENST00000487266 HSP90AA4PQ58FG1 418 aa16.68■□□□□ 0.26
GABPA-203ENST00000487266 RAB41Q5JT25 222 aa16.68■□□□□ 0.26
GABPA-203ENST00000487266 C10orf120Q5SQS8 335 aa16.68■□□□□ 0.26
GABPA-203ENST00000487266 LY6G5CQ5SRR4 150 aa16.68■□□□□ 0.26
GABPA-203ENST00000487266 GJB7Q6PEY0 223 aa16.68■□□□□ 0.26
GABPA-203ENST00000487266 MAMSTRQ6ZN01 415 aa16.68■□□□□ 0.26
GABPA-203ENST00000487266 CLEC17AQ6ZS10 378 aa16.68■□□□□ 0.26
GABPA-203ENST00000487266 SYNPOQ8N3V7 929 aa16.68■□□□□ 0.26
GABPA-203ENST00000487266 SUMF1Q8NBK3 374 aa16.68■□□□□ 0.26
GABPA-203ENST00000487266 RBBP8NLQ8NC74 664 aaPredicted RBP16.68■□□□□ 0.26
GABPA-203ENST00000487266 EHBP1Q8NDI1 1231 aa16.68■□□□□ 0.26
GABPA-203ENST00000487266 RPLP0P6Q8NHW5 317 aa16.68■□□□□ 0.26
GABPA-203ENST00000487266 CRACR2AQ9BSW2 395 aa16.68■□□□□ 0.26
GABPA-203ENST00000487266 ULBP1Q9BZM6 244 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms