RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 ZIM3Q96PE6 472 aa13.59□□□□□ -0.23
PTPRN2-202ENST00000389416 IRAK4Q9NWZ3 460 aa13.59□□□□□ -0.23
PTPRN2-202ENST00000389416 GIT1Q9Y2X7 761 aa13.59□□□□□ -0.23
PTPRN2-202ENST00000389416 RCCD1A6NED2 376 aa13.59□□□□□ -0.23
PTPRN2-202ENST00000389416 ZSCAN5CA6NGD5 496 aaPredicted RBP13.59□□□□□ -0.23
PTPRN2-202ENST00000389416 CBX4O00257 560 aa13.59□□□□□ -0.23
PTPRN2-202ENST00000389416 ZNF263O14978 683 aa13.59□□□□□ -0.23
PTPRN2-202ENST00000389416 NPR3P17342 541 aa13.59□□□□□ -0.23
PTPRN2-202ENST00000389416 SPIRE1Q08AE8 756 aa13.59□□□□□ -0.23
PTPRN2-202ENST00000389416 ARHGEF7Q14155 803 aa13.59□□□□□ -0.23
PTPRN2-202ENST00000389416 CCNG2Q16589 344 aa13.59□□□□□ -0.23
PTPRN2-202ENST00000389416 TSHZ1Q6ZSZ6 1077 aa13.59□□□□□ -0.23
PTPRN2-202ENST00000389416 ZDHHC17Q8IUH5 632 aa13.59□□□□□ -0.23
PTPRN2-202ENST00000389416 DAW1Q8N136 415 aa13.59□□□□□ -0.23
PTPRN2-202ENST00000389416 STAMBPL1Q96FJ0 436 aa13.59□□□□□ -0.23
PTPRN2-202ENST00000389416 DCUN1D1Q96GG9 259 aa13.59□□□□□ -0.23
PTPRN2-202ENST00000389416 TGS1Q96RS0 853 aaKnown RBP13.59□□□□□ -0.23
PTPRN2-202ENST00000389416 ARHGEF38Q9NXL2 777 aa13.59□□□□□ -0.23
PTPRN2-202ENST00000389416 DDX20Q9UHI6 824 aaKnown RBP13.59□□□□□ -0.23
PTPRN2-202ENST00000389416 RPS6KL1Q9Y6S9 549 aa13.59□□□□□ -0.23
PTPRN2-202ENST00000389416 LTBP4Q8N2S1 1624 aa13.59□□□□□ -0.23
PTPRN2-202ENST00000389416 KCNK1O00180 336 aa13.58□□□□□ -0.23
PTPRN2-202ENST00000389416 CLDN5O00501 218 aa13.58□□□□□ -0.23
PTPRN2-202ENST00000389416 PJA2O43164 708 aa13.58□□□□□ -0.23
PTPRN2-202ENST00000389416 TTC23LQ6PF05 361 aa13.58□□□□□ -0.23
PTPRN2-202ENST00000389416 RAB3IPQ96QF0 476 aaPredicted RBP13.58□□□□□ -0.23
PTPRN2-202ENST00000389416 BCAP29Q9UHQ4 241 aa13.58□□□□□ -0.23
PTPRN2-202ENST00000389416 ANKRD65E5RJM6 399 aa13.58□□□□□ -0.24
PTPRN2-202ENST00000389416 CFLARO15519 480 aa13.58□□□□□ -0.24
PTPRN2-202ENST00000389416 TSPAN1O60635 241 aa13.58□□□□□ -0.24
PTPRN2-202ENST00000389416 TSPAN3O60637 253 aa13.58□□□□□ -0.24
PTPRN2-202ENST00000389416 ANXA9O76027 345 aa13.58□□□□□ -0.24
PTPRN2-202ENST00000389416 SESN3P58005 492 aa13.58□□□□□ -0.24
PTPRN2-202ENST00000389416 ARHGAP1Q07960 439 aa13.58□□□□□ -0.24
PTPRN2-202ENST00000389416 SDHAF4Q5VUM1 108 aa13.58□□□□□ -0.24
PTPRN2-202ENST00000389416 FOXR2Q6PJQ5 311 aa13.58□□□□□ -0.24
PTPRN2-202ENST00000389416 ZSWIM2Q8NEG5 633 aa13.58□□□□□ -0.24
PTPRN2-202ENST00000389416 CIPCQ9C0C6 399 aa13.58□□□□□ -0.24
PTPRN2-202ENST00000389416 PDZD7Q9H5P4 517 aa13.58□□□□□ -0.24
PTPRN2-202ENST00000389416 POPDC2Q9HBU9 364 aa13.58□□□□□ -0.24
PTPRN2-202ENST00000389416 SF3B1O75533 1304 aaKnown RBP eCLIP13.58□□□□□ -0.24
PTPRN2-202ENST00000389416 B4GALT4O60513 344 aa13.58□□□□□ -0.24
PTPRN2-202ENST00000389416 MARSP56192 900 aaKnown RBP13.58□□□□□ -0.24
PTPRN2-202ENST00000389416 SH2D4BQ5SQS7 431 aa13.58□□□□□ -0.24
PTPRN2-202ENST00000389416 TBCBQ99426 244 aa13.58□□□□□ -0.24
PTPRN2-202ENST00000389416 ST6GALNAC4Q9H4F1 302 aa13.58□□□□□ -0.24
PTPRN2-202ENST00000389416 XAB2Q9HCS7 855 aaKnown RBP13.58□□□□□ -0.24
PTPRN2-202ENST00000389416 TRMT13Q9NUP7 481 aaKnown RBP13.58□□□□□ -0.24
PTPRN2-202ENST00000389416 PCDHA3Q9Y5H8 950 aa13.58□□□□□ -0.24
PTPRN2-202ENST00000389416 OPLAHO14841 1288 aa13.58□□□□□ -0.24
PTPRN2-202ENST00000389416 RHOCP08134 193 aa13.58□□□□□ -0.24
PTPRN2-202ENST00000389416 GLI1P08151 1106 aa13.58□□□□□ -0.24
PTPRN2-202ENST00000389416 ESRRAP11474 423 aaPredicted RBP13.58□□□□□ -0.24
PTPRN2-202ENST00000389416 PTK7Q13308 1070 aa13.58□□□□□ -0.24
PTPRN2-202ENST00000389416 UGP2Q16851 508 aa13.58□□□□□ -0.24
PTPRN2-202ENST00000389416 ATP13A4Q4VNC1 1196 aa13.58□□□□□ -0.24
PTPRN2-202ENST00000389416 DAB2IPQ5VWQ8 1189 aa13.58□□□□□ -0.24
PTPRN2-202ENST00000389416 ITIH5Q86UX2 942 aa13.58□□□□□ -0.24
PTPRN2-202ENST00000389416 LRRC52Q8N7C0 313 aa13.58□□□□□ -0.24
PTPRN2-202ENST00000389416 SLC27A5Q9Y2P5 690 aa13.58□□□□□ -0.24
PTPRN2-202ENST00000389416 RARAP10276 462 aa13.57□□□□□ -0.24
PTPRN2-202ENST00000389416 TUBP50607 506 aa13.57□□□□□ -0.24
PTPRN2-202ENST00000389416 OXCT1P55809 520 aa13.57□□□□□ -0.24
PTPRN2-202ENST00000389416 RPL7AP62424 266 aaKnown RBP13.57□□□□□ -0.24
PTPRN2-202ENST00000389416 MAMLD1Q13495 774 aa13.57□□□□□ -0.24
PTPRN2-202ENST00000389416 ZCWPW2Q504Y3 356 aa13.57□□□□□ -0.24
PTPRN2-202ENST00000389416 LATS2Q9NRM7 1088 aa13.57□□□□□ -0.24
PTPRN2-202ENST00000389416 PCMTD2Q9NV79 361 aa13.57□□□□□ -0.24
PTPRN2-202ENST00000389416 PSMC3IPQ9P2W1 217 aaPredicted RBP13.57□□□□□ -0.24
PTPRN2-202ENST00000389416 NR2E3Q9Y5X4 410 aa13.57□□□□□ -0.24
PTPRN2-202ENST00000389416 GMNCA6NCL1 334 aa13.57□□□□□ -0.24
PTPRN2-202ENST00000389416 DIAPH2O60879 1101 aa13.57□□□□□ -0.24
PTPRN2-202ENST00000389416 C22orf31O95567 290 aa13.57□□□□□ -0.24
PTPRN2-202ENST00000389416 GFAPP14136 432 aa13.57□□□□□ -0.24
PTPRN2-202ENST00000389416 PLD1Q13393 1074 aa13.57□□□□□ -0.24
PTPRN2-202ENST00000389416 TUSC3Q13454 348 aa13.57□□□□□ -0.24
PTPRN2-202ENST00000389416 MROH9Q5TGP6 573 aa13.57□□□□□ -0.24
PTPRN2-202ENST00000389416 AADACL2Q6P093 401 aa13.57□□□□□ -0.24
PTPRN2-202ENST00000389416 MRPL45Q9BRJ2 306 aaKnown RBP13.57□□□□□ -0.24
PTPRN2-202ENST00000389416 NT5MQ9NPB1 228 aa13.57□□□□□ -0.24
PTPRN2-202ENST00000389416 RBM22Q9NW64 420 aaKnown RBP eCLIP13.57□□□□□ -0.243e-6■■■□□ 18
PTPRN2-202ENST00000389416 SENP1Q9P0U3 644 aa13.57□□□□□ -0.24
PTPRN2-202ENST00000389416 PCDHB8Q9UN66 801 aa13.57□□□□□ -0.24
PTPRN2-202ENST00000389416 GOLGA8QA0A0J9YX86 632 aa13.57□□□□□ -0.24
PTPRN2-202ENST00000389416 GOLGA8OA6NCC3 632 aa13.57□□□□□ -0.24
PTPRN2-202ENST00000389416 GOLGA8NF8WBI6 632 aa13.57□□□□□ -0.24
PTPRN2-202ENST00000389416 SMAPO00193 183 aa13.57□□□□□ -0.24
PTPRN2-202ENST00000389416 AGTP01019 485 aa13.57□□□□□ -0.24
PTPRN2-202ENST00000389416 C1orf127Q8N9H9 656 aa13.57□□□□□ -0.24
PTPRN2-202ENST00000389416 TKTL2Q9H0I9 626 aa13.57□□□□□ -0.24
PTPRN2-202ENST00000389416 CHST12Q9NRB3 414 aa13.57□□□□□ -0.24
PTPRN2-202ENST00000389416 STX7O15400 261 aaKnown RBP13.57□□□□□ -0.24
PTPRN2-202ENST00000389416 RPL9P32969 192 aaKnown RBP13.57□□□□□ -0.24
PTPRN2-202ENST00000389416 NOMO3P69849 1222 aa13.57□□□□□ -0.24
PTPRN2-202ENST00000389416 GRIK3Q13003 919 aa13.57□□□□□ -0.24
PTPRN2-202ENST00000389416 PPP1R26Q5T8A7 1209 aaPredicted RBP13.57□□□□□ -0.24
PTPRN2-202ENST00000389416 THEMIS2Q5TEJ8 643 aa13.57□□□□□ -0.24
PTPRN2-202ENST00000389416 C9orf57Q5W0N0 161 aa13.57□□□□□ -0.24
PTPRN2-202ENST00000389416 C4orf22Q6V702 233 aa13.57□□□□□ -0.24
PTPRN2-202ENST00000389416 ANKRD52Q8NB46 1076 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms