RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 ZFP14Q9HCL3 533 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 GOLGA6AQ9NYA3 693 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 TRIM10Q9UDY6 481 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 ZMYM5Q9UJ78 669 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 PCDHB5Q9Y5E4 795 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 SNX9Q9Y5X1 595 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 MIA3Q5JRA6 1907 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 EP300Q09472 2414 aaPredicted RBP10.96□□□□□ -0.65
COL5A1-202ENST00000371820 PATJQ8NI35 1801 aa10.96□□□□□ -0.65
COL5A1-202ENST00000371820 CLIC2O15247 247 aa10.96□□□□□ -0.65
COL5A1-202ENST00000371820 SHOX2O60902 331 aaPredicted RBP10.96□□□□□ -0.65
COL5A1-202ENST00000371820 MOCS3O95396 460 aa10.96□□□□□ -0.65
COL5A1-202ENST00000371820 LMNAP02545 664 aaKnown RBP10.96□□□□□ -0.65
COL5A1-202ENST00000371820 DLATP10515 647 aaKnown RBP10.96□□□□□ -0.65
COL5A1-202ENST00000371820 GLULP15104 373 aa10.96□□□□□ -0.65
COL5A1-202ENST00000371820 SKOR1P84550 965 aa10.96□□□□□ -0.65
COL5A1-202ENST00000371820 PRKCQQ04759 706 aa10.96□□□□□ -0.65
COL5A1-202ENST00000371820 CYP24A1Q07973 514 aa10.96□□□□□ -0.65
COL5A1-202ENST00000371820 KCNH2Q12809 1159 aa10.96□□□□□ -0.65
COL5A1-202ENST00000371820 RPS6KA1Q15418 735 aa10.96□□□□□ -0.65
COL5A1-202ENST00000371820 MLF2Q15773 248 aaPredicted RBP10.96□□□□□ -0.65
COL5A1-202ENST00000371820 ARHGAP15Q53QZ3 475 aa10.96□□□□□ -0.65
COL5A1-202ENST00000371820 CFAP58Q5T655 872 aa10.96□□□□□ -0.65
COL5A1-202ENST00000371820 MEI1Q5TIA1 1274 aa10.96□□□□□ -0.65
COL5A1-202ENST00000371820 KLHDC7AQ5VTJ3 777 aa10.96□□□□□ -0.65
COL5A1-202ENST00000371820 ZC3H14Q6PJT7 736 aaKnown RBP10.96□□□□□ -0.65
COL5A1-202ENST00000371820 LRIG3Q6UXM1 1119 aa10.96□□□□□ -0.65
COL5A1-202ENST00000371820 MAATS1Q7Z4T9 603 aa10.96□□□□□ -0.65
COL5A1-202ENST00000371820 C1orf210Q8IVY1 113 aa10.96□□□□□ -0.65
COL5A1-202ENST00000371820 ADGRF2Q8IZF7 708 aa10.96□□□□□ -0.65
COL5A1-202ENST00000371820 RDH13Q8NBN7 331 aa10.96□□□□□ -0.65
COL5A1-202ENST00000371820 ATAD1Q8NBU5 361 aa10.96□□□□□ -0.65
COL5A1-202ENST00000371820 DEPDC1BQ8WUY9 529 aa10.96□□□□□ -0.65
COL5A1-202ENST00000371820 PSMG2Q969U7 264 aa10.96□□□□□ -0.65
COL5A1-202ENST00000371820 HPDLQ96IR7 371 aa10.96□□□□□ -0.65
COL5A1-202ENST00000371820 SPAG5Q96R06 1193 aa10.96□□□□□ -0.65
COL5A1-202ENST00000371820 SEPT5Q99719 369 aaPredicted RBP10.96□□□□□ -0.65
COL5A1-202ENST00000371820 KXD1Q9BQD3 176 aa10.96□□□□□ -0.65
COL5A1-202ENST00000371820 LSM14BQ9BX40 385 aaKnown RBP10.96□□□□□ -0.65
COL5A1-202ENST00000371820 KCTD10Q9H3F6 313 aa10.96□□□□□ -0.65
COL5A1-202ENST00000371820 SLITRK6Q9H5Y7 841 aa10.96□□□□□ -0.65
COL5A1-202ENST00000371820 GDF3Q9NR23 364 aa10.96□□□□□ -0.65
COL5A1-202ENST00000371820 DDX43Q9NXZ2 648 aaKnown RBP10.96□□□□□ -0.65
COL5A1-202ENST00000371820 ABI2Q9NYB9 513 aaPredicted RBP10.96□□□□□ -0.65
COL5A1-202ENST00000371820 R4GN57 208 aa10.96□□□□□ -0.65
COL5A1-202ENST00000371820 CACNA1AO00555 2505 aa10.96□□□□□ -0.66
COL5A1-202ENST00000371820 SCN1AP35498 2009 aa10.96□□□□□ -0.66
COL5A1-202ENST00000371820 DCHS1Q96JQ0 3298 aa10.96□□□□□ -0.66
COL5A1-202ENST00000371820 OTOGLQ3ZCN5 2332 aa10.95□□□□□ -0.66
COL5A1-202ENST00000371820 KANSL1LA0AUZ9 987 aa10.95□□□□□ -0.66
COL5A1-202ENST00000371820 RCCD1A6NED2 376 aa10.95□□□□□ -0.66
COL5A1-202ENST00000371820 GOLGA6L10A6NI86 522 aa10.95□□□□□ -0.66
COL5A1-202ENST00000371820 EBAG9O00559 213 aa10.95□□□□□ -0.66
COL5A1-202ENST00000371820 ZNF263O14978 683 aa10.95□□□□□ -0.66
COL5A1-202ENST00000371820 SRGAP2O75044 1071 aa10.95□□□□□ -0.66
COL5A1-202ENST00000371820 LRRN2O75325 713 aa10.95□□□□□ -0.66
COL5A1-202ENST00000371820 VNN2O95498 520 aa10.95□□□□□ -0.66
COL5A1-202ENST00000371820 FAM163BP0C2L3 166 aa10.95□□□□□ -0.66
COL5A1-202ENST00000371820 SP9P0CG40 484 aa10.95□□□□□ -0.66
COL5A1-202ENST00000371820 HAPLN1P10915 354 aaPredicted RBP10.95□□□□□ -0.66
COL5A1-202ENST00000371820 CDC25CP30307 473 aa10.95□□□□□ -0.66
COL5A1-202ENST00000371820 GBP1P32455 592 aa10.95□□□□□ -0.66
COL5A1-202ENST00000371820 POLR2FP61218 127 aaKnown RBP10.95□□□□□ -0.66
COL5A1-202ENST00000371820 RPL10AP62906 217 aaKnown RBP10.95□□□□□ -0.66
COL5A1-202ENST00000371820 CETN1Q12798 172 aa10.95□□□□□ -0.66
COL5A1-202ENST00000371820 TRPC3Q13507 836 aa10.95□□□□□ -0.66
COL5A1-202ENST00000371820 MAPRE1Q15691 268 aaKnown RBP10.95□□□□□ -0.66
COL5A1-202ENST00000371820 EXOC3L4Q17RC7 722 aa10.95□□□□□ -0.66
COL5A1-202ENST00000371820 INTS6LQ5JSJ4 861 aaKnown RBP10.95□□□□□ -0.66
COL5A1-202ENST00000371820 HGSNATQ68CP4 663 aa10.95□□□□□ -0.66
COL5A1-202ENST00000371820 LMBRD2Q68DH5 695 aaPredicted RBP10.95□□□□□ -0.66
COL5A1-202ENST00000371820 C4orf50Q6ZRC1 276 aa10.95□□□□□ -0.66
COL5A1-202ENST00000371820 SND1Q7KZF4 910 aaKnown RBP eCLIP10.95□□□□□ -0.66
COL5A1-202ENST00000371820 DNAJB7Q7Z6W7 309 aaPredicted RBP10.95□□□□□ -0.66
COL5A1-202ENST00000371820 SLC9A9Q8IVB4 645 aa10.95□□□□□ -0.66
COL5A1-202ENST00000371820 HS6ST3Q8IZP7 471 aa10.95□□□□□ -0.66
COL5A1-202ENST00000371820 C3orf20Q8ND61 904 aa10.95□□□□□ -0.66
COL5A1-202ENST00000371820 ACTRT1Q8TDG2 376 aa10.95□□□□□ -0.66
COL5A1-202ENST00000371820 TMEM174Q8WUU8 243 aa10.95□□□□□ -0.66
COL5A1-202ENST00000371820 DNASE1L2Q92874 299 aa10.95□□□□□ -0.66
COL5A1-202ENST00000371820 SMARCD2Q92925 531 aa10.95□□□□□ -0.66
COL5A1-202ENST00000371820 CCDC127Q96BQ5 260 aa10.95□□□□□ -0.66
COL5A1-202ENST00000371820 FUBP3Q96I24 572 aaKnown RBP eCLIP10.95□□□□□ -0.66
COL5A1-202ENST00000371820 ASB16Q96NS5 453 aa10.95□□□□□ -0.66
COL5A1-202ENST00000371820 TMEM209Q96SK2 561 aa10.95□□□□□ -0.66
COL5A1-202ENST00000371820 SH3GL2Q99962 352 aa10.95□□□□□ -0.66
COL5A1-202ENST00000371820 LRRC1Q9BTT6 524 aa10.95□□□□□ -0.66
COL5A1-202ENST00000371820 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.95□□□□□ -0.66
COL5A1-202ENST00000371820 CAPS2Q9BXY5 557 aa10.95□□□□□ -0.66
COL5A1-202ENST00000371820 CRISPLD1Q9H336 500 aa10.95□□□□□ -0.66
COL5A1-202ENST00000371820 ATXN3LQ9H3M9 355 aa10.95□□□□□ -0.66
COL5A1-202ENST00000371820 UXTQ9UBK9 157 aaPredicted RBP10.95□□□□□ -0.66
COL5A1-202ENST00000371820 SIX4Q9UIU6 781 aa10.95□□□□□ -0.66
COL5A1-202ENST00000371820 GGA2Q9UJY4 613 aa10.95□□□□□ -0.66
COL5A1-202ENST00000371820 SLC27A5Q9Y2P5 690 aa10.95□□□□□ -0.66
COL5A1-202ENST00000371820 CACNA1IQ9P0X4 2223 aa10.94□□□□□ -0.66
COL5A1-202ENST00000371820 A0A1W2PRU2 124 aa10.94□□□□□ -0.66
COL5A1-202ENST00000371820 HMGB1P1B2RPK0 211 aaPredicted RBP10.94□□□□□ -0.66
COL5A1-202ENST00000371820 GABRDO14764 452 aa10.94□□□□□ -0.66
COL5A1-202ENST00000371820 PHACTR2O75167 634 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 191.3 ms