RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR48, Length 113 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR48snR48 MCM1P11746 286 aa4.02□□□□□ -1.77
snR48snR48 AKR1P39010 764 aa4.02□□□□□ -1.77
snR48snR48 NAM7P30771 971 aaKnown RBP4.01□□□□□ -1.77
snR48snR48 NCL1P38205 684 aaKnown RBP4.01□□□□□ -1.77
snR48snR48 YNR021WP53723 404 aaKnown RBP4.01□□□□□ -1.77
snR48snR48 TY4B-PA0A0B7P3V8 1104 aa4□□□□□ -1.77
snR48snR48 TY4A-HQ6Q5P6 413 aa4□□□□□ -1.77
snR48snR48 MSB1P21339 1137 aaKnown RBP3.99□□□□□ -1.77
snR48snR48 REC8Q12188 680 aa3.99□□□□□ -1.77
snR48snR48 SWI5P08153 709 aa3.98□□□□□ -1.77
snR48snR48 MLF3P32047 452 aa3.98□□□□□ -1.77
snR48snR48 ISF1P32488 338 aa3.98□□□□□ -1.77
snR48snR48 GLC3P32775 704 aa3.98□□□□□ -1.77
snR48snR48 POL12P38121 705 aaPredicted RBP3.98□□□□□ -1.77
snR48snR48 DFG16Q99234 619 aa3.98□□□□□ -1.77
snR48snR48 TFB3Q03290 321 aa3.97□□□□□ -1.77
snR48snR48 CDA2Q06703 312 aa3.97□□□□□ -1.77
snR48snR48 GAS1P22146 559 aaKnown RBP3.96□□□□□ -1.78
snR48snR48 THI80P35202 319 aa3.96□□□□□ -1.78
snR48snR48 MRP10O75012 95 aa3.95□□□□□ -1.78
snR48snR48 TSA1P34760 196 aaKnown RBP3.95□□□□□ -1.78
snR48snR48 SOH1P38633 127 aa3.95□□□□□ -1.78
snR48snR48 ATG3P40344 310 aa3.95□□□□□ -1.78
snR48snR48 SDH1Q00711 640 aa3.95□□□□□ -1.78
snR48snR48 AIM7Q12156 149 aa3.94□□□□□ -1.78
snR48snR48 DSE4P53753 1117 aa3.93□□□□□ -1.78
snR48snR48 FLR1P38124 548 aa3.92□□□□□ -1.78
snR48snR48 APM2P38700 605 aa3.92□□□□□ -1.78
snR48snR48 YNR040WP53736 256 aa3.92□□□□□ -1.78
snR48snR48 Q0182Q9ZZW1 134 aa3.92□□□□□ -1.78
snR48snR48 SPT5P27692 1063 aaKnown RBP3.91□□□□□ -1.78
snR48snR48 TED1P40533 473 aa3.91□□□□□ -1.78
snR48snR48 MTO1P53070 669 aa3.91□□□□□ -1.78
snR48snR48 CUS1Q02554 436 aaPredicted RBP3.91□□□□□ -1.78
snR48snR48 GSF2Q04697 403 aaKnown RBP3.91□□□□□ -1.78
snR48snR48 CBC2Q08920 208 aaKnown RBP RIP-Chip data3.91□□□□□ -1.78not detected
snR48snR48 CSE4P36012 229 aa3.9□□□□□ -1.79
snR48snR48 YHL008CP38750 627 aa3.9□□□□□ -1.79
snR48snR48 GIP2P40036 548 aa3.9□□□□□ -1.79
snR48snR48 IDI1P15496 288 aa3.89□□□□□ -1.79
snR48snR48 YNR065CP53751 1116 aa3.89□□□□□ -1.79
snR48snR48 UTP4Q06679 776 aaKnown RBP3.89□□□□□ -1.79
snR48snR48 RPS6AP0CX37 236 aaKnown RBP3.88□□□□□ -1.79
snR48snR48 RPS6BP0CX38 236 aaPredicted RBP3.88□□□□□ -1.79
snR48snR48 GCD1P09032 578 aaPredicted RBP3.87□□□□□ -1.79
snR48snR48 SSA2P10592 639 aaKnown RBP3.87□□□□□ -1.79
snR48snR48 AIM9P40053 627 aaKnown RBP3.87□□□□□ -1.79
snR48snR48 YER156CP40093 338 aaKnown RBP3.86□□□□□ -1.79
snR48snR48 RPC31P17890 251 aa3.85□□□□□ -1.79
snR48snR48 PRP6P19735 899 aaPredicted RBP3.85□□□□□ -1.79
snR48snR48 KAP122P32767 1081 aa3.84□□□□□ -1.79
snR48snR48 NFS1P25374 497 aa3.83□□□□□ -1.8
snR48snR48 SOK2P53438 785 aaPredicted RBP3.83□□□□□ -1.8
snR48snR48 YFL034WP43564 1073 aa3.81□□□□□ -1.8
snR48snR48 YPP1P46951 817 aa3.81□□□□□ -1.8
snR48snR48 NCE103P53615 221 aa3.81□□□□□ -1.8
snR48snR48 YDJ1P25491 409 aaKnown RBP3.8□□□□□ -1.8
snR48snR48 NTH2P35172 780 aa3.79□□□□□ -1.8
snR48snR48 HSP78P33416 811 aa3.78□□□□□ -1.8
snR48snR48 ITC1P53125 1264 aa3.77□□□□□ -1.81
snR48snR48 SCD5P34758 872 aa3.76□□□□□ -1.81
snR48snR48 ABZ1P37254 787 aaPredicted RBP3.76□□□□□ -1.81
snR48snR48 YML122CQ03207 126 aa3.76□□□□□ -1.81
snR48snR48 PAN5P38787 379 aa3.75□□□□□ -1.81
snR48snR48 GIC2Q06648 383 aa3.75□□□□□ -1.81
snR48snR48 ORC3P54790 616 aa3.74□□□□□ -1.81
snR48snR48 MSH6Q03834 1242 aa3.74□□□□□ -1.81
snR48snR48 MAE1P36013 669 aaKnown RBP3.73□□□□□ -1.81
snR48snR48 CYT1P07143 309 aa3.72□□□□□ -1.81
snR48snR48 HXT5P38695 592 aa3.72□□□□□ -1.81
snR48snR48 POL5P39985 1022 aaKnown RBP3.72□□□□□ -1.81
snR48snR48 LEM3P42838 414 aa3.72□□□□□ -1.81
snR48snR48 RSC2Q06488 889 aa3.72□□□□□ -1.81
snR48snR48 PNS1Q12412 539 aa3.72□□□□□ -1.81
snR48snR48 NSI1Q12457 570 aa3.72□□□□□ -1.81
snR48snR48 GUP1P53154 560 aa3.7□□□□□ -1.82
snR48snR48 AIM3P38266 947 aaKnown RBP3.69□□□□□ -1.82
snR48snR48 MMM1P41800 426 aa3.69□□□□□ -1.82
snR48snR48 CIT3P43635 486 aa3.69□□□□□ -1.82
snR48snR48 RIM8P53179 542 aa3.69□□□□□ -1.82
snR48snR48 RDS2P19541 446 aaKnown RBP3.68□□□□□ -1.82
snR48snR48 YBL036CP38197 257 aa3.68□□□□□ -1.82
snR48snR48 QDR2P40474 542 aa3.68□□□□□ -1.82
snR48snR48 YOR296WQ08748 1289 aa3.68□□□□□ -1.82
snR48snR48 TUB2P02557 457 aaKnown RBP3.67□□□□□ -1.82
snR48snR48 ELG1Q12050 791 aa3.67□□□□□ -1.82
snR48snR48 TSC13Q99190 310 aa3.67□□□□□ -1.82
snR48snR48 SUP45P12385 437 aaKnown RBP3.66□□□□□ -1.82
snR48snR48 UBP1P25037 809 aa3.66□□□□□ -1.82
snR48snR48 YOR059CQ08448 450 aaKnown RBP3.66□□□□□ -1.82
snR48snR48 SOG2Q08817 791 aa3.66□□□□□ -1.82
snR48snR48 PDI1P17967 522 aaKnown RBP3.65□□□□□ -1.83
snR48snR48 WHI3P34761 661 aaKnown RBP3.65□□□□□ -1.83
snR48snR48 INP51P40559 946 aaKnown RBP3.65□□□□□ -1.83
snR48snR48 OYE3P41816 400 aaPredicted RBP3.65□□□□□ -1.83
snR48snR48 YJL181WP46987 611 aa3.64□□□□□ -1.83
snR48snR48 RIM21P48565 533 aa3.64□□□□□ -1.83
snR48snR48 PPT1P53043 513 aa3.64□□□□□ -1.83
snR48snR48 SOD2P00447 233 aa3.63□□□□□ -1.83
snR48snR48 ENO2P00925 437 aaKnown RBP3.63□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 42.6 ms