RNA–Protein interactions for RNA: YPL017C

IRC15, Transcript of Microtubule associated protein, yeast

Gene IRC15, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IRC15	YPL017C	HAT1	Q12341	374 aa		14.05	□□□□□ -0.16
IRC15	YPL017C	PIL1	P53252	339 aa	Known RBP	14.04	□□□□□ -0.16
IRC15	YPL017C	ARP5	P53946	755 aa		14.04	□□□□□ -0.16
IRC15	YPL017C	LAM4	P38800	1345 aa		14.03	□□□□□ -0.16
IRC15	YPL017C	CPA2	P03965	1118 aa	Known RBP	14.03	□□□□□ -0.16
IRC15	YPL017C	OPI1	P21957	404 aa		14.03	□□□□□ -0.16
IRC15	YPL017C	NPR2	P39923	615 aa		14.03	□□□□□ -0.16
IRC15	YPL017C	RRI2	Q12348	645 aa		14.03	□□□□□ -0.16
IRC15	YPL017C	PEX14	P53112	341 aa		14.02	□□□□□ -0.16
IRC15	YPL017C	YJL181W	P46987	611 aa		14.01	□□□□□ -0.17
IRC15	YPL017C	BBC1	P47068	1157 aa		14.01	□□□□□ -0.17
IRC15	YPL017C	POM152	P39685	1337 aa		14.01	□□□□□ -0.17
IRC15	YPL017C	FRS2	P15625	503 aa	Known RBP	14	□□□□□ -0.17
IRC15	YPL017C	TTI1	P36097	1038 aa		14	□□□□□ -0.17
IRC15	YPL017C	HAL5	P38970	855 aa	Known RBP	14	□□□□□ -0.17
IRC15	YPL017C	PKH3	Q03306	898 aa	Predicted RBP	14	□□□□□ -0.17
IRC15	YPL017C	CCT5	P40413	562 aa	Known RBP	14	□□□□□ -0.17
IRC15	YPL017C	ELG1	Q12050	791 aa		14	□□□□□ -0.17
IRC15	YPL017C	IMP2'	P32351	346 aa		13.99	□□□□□ -0.17
IRC15	YPL017C	ELM1	P32801	640 aa		13.99	□□□□□ -0.17
IRC15	YPL017C	NGR1	P32831	672 aa	Known RBP	13.99	□□□□□ -0.17
IRC15	YPL017C	YPL150W	Q12152	901 aa		13.99	□□□□□ -0.17
IRC15	YPL017C	PEP3	P27801	918 aa		13.98	□□□□□ -0.17
IRC15	YPL017C	FBP26	P32604	452 aa		13.98	□□□□□ -0.17
IRC15	YPL017C	ECM23	Q02710	187 aa		13.98	□□□□□ -0.17
IRC15	YPL017C	RDS1	P25611	832 aa		13.97	□□□□□ -0.17
IRC15	YPL017C	PSK2	Q08217	1101 aa		13.97	□□□□□ -0.17
IRC15	YPL017C	CTI6	Q08923	506 aa		13.97	□□□□□ -0.17
IRC15	YPL017C	MCM2	P29469	868 aa		13.96	□□□□□ -0.17
IRC15	YPL017C	CTR9	P89105	1077 aa		13.96	□□□□□ -0.17
IRC15	YPL017C	MATALPHA2	P0CY08	210 aa		13.95	□□□□□ -0.18
IRC15	YPL017C	HMLALPHA2	P0CY09	210 aa		13.95	□□□□□ -0.18
IRC15	YPL017C	GLO3	P38682	493 aa	Known RBP	13.95	□□□□□ -0.18
IRC15	YPL017C	YHL017W	P38745	532 aa		13.95	□□□□□ -0.18
IRC15	YPL017C	YKE2	P52553	114 aa		13.95	□□□□□ -0.18
IRC15	YPL017C	KAR5	Q04746	504 aa		13.95	□□□□□ -0.18
IRC15	YPL017C	ESF1	Q06344	628 aa	Known RBP	13.95	□□□□□ -0.18
IRC15	YPL017C	GLN1	P32288	370 aa	Known RBP	13.95	□□□□□ -0.18
IRC15	YPL017C	NPR3	P38742	1146 aa		13.95	□□□□□ -0.18
IRC15	YPL017C	SSL2	Q00578	843 aa		13.95	□□□□□ -0.18
IRC15	YPL017C	THI3	Q07471	609 aa		13.95	□□□□□ -0.18
IRC15	YPL017C	PIF1	P07271	859 aa		13.94	□□□□□ -0.18
IRC15	YPL017C	MAL33	P38157	468 aa		13.94	□□□□□ -0.18
IRC15	YPL017C	TAH18	Q12181	623 aa		13.94	□□□□□ -0.18
IRC15	YPL017C	TRS33	Q99394	268 aa		13.94	□□□□□ -0.18
IRC15	YPL017C	RAT1	Q02792	1006 aa	Known RBP	13.93	□□□□□ -0.18
IRC15	YPL017C	YMR074C	Q04773	145 aa		13.93	□□□□□ -0.18
IRC15	YPL017C	BUG1	Q12191	341 aa		13.93	□□□□□ -0.18
IRC15	YPL017C	MGM1	P32266	881 aa		13.92	□□□□□ -0.18
IRC15	YPL017C	MIC60	P36112	540 aa		13.92	□□□□□ -0.18
IRC15	YPL017C	MET1	P36150	593 aa		13.92	□□□□□ -0.18
IRC15	YPL017C	RFC5	P38251	354 aa		13.92	□□□□□ -0.18
IRC15	YPL017C	SRC1	Q03707	834 aa		13.92	□□□□□ -0.18
IRC15	YPL017C	YLR407W	Q06070	228 aa		13.92	□□□□□ -0.18
IRC15	YPL017C	FAS2	P19097	1887 aa	Known RBP	13.92	□□□□□ -0.18
IRC15	YPL017C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	13.91	□□□□□ -0.18	not detected
IRC15	YPL017C	EPL1	P43572	832 aa		13.91	□□□□□ -0.18
IRC15	YPL017C	PPM2	Q08282	695 aa		13.9	□□□□□ -0.18
IRC15	YPL017C	SSF2	Q12153	453 aa	Predicted RBP	13.9	□□□□□ -0.18
IRC15	YPL017C	DDP1	Q99321	188 aa	Known RBP	13.9	□□□□□ -0.18
IRC15	YPL017C	GRX7	P38068	203 aa		13.9	□□□□□ -0.19
IRC15	YPL017C	YIR042C	P40586	236 aa		13.9	□□□□□ -0.19
IRC15	YPL017C	BUD6	P41697	788 aa		13.9	□□□□□ -0.19
IRC15	YPL017C	MRPL10	P36520	322 aa		13.89	□□□□□ -0.19
IRC15	YPL017C	IRC8	P47046	822 aa		13.89	□□□□□ -0.19
IRC15	YPL017C	LYS4	P49367	693 aa	Predicted RBP	13.89	□□□□□ -0.19
IRC15	YPL017C	INM2	Q05533	292 aa		13.89	□□□□□ -0.19
IRC15	YPL017C	ICP55	P40051	511 aa		13.88	□□□□□ -0.19
IRC15	YPL017C	ENP2	P48234	707 aa	Known RBP	13.88	□□□□□ -0.19
IRC15	YPL017C	ETT1	Q08421	412 aa	Known RBP	13.88	□□□□□ -0.19
IRC15	YPL017C	DPH6	Q12429	685 aa		13.88	□□□□□ -0.19
IRC15	YPL017C	COQ1	P18900	473 aa		13.87	□□□□□ -0.19
IRC15	YPL017C	CRG1	P38892	291 aa	RIP-Chip data	13.87	□□□□□ -0.19	not detected
IRC15	YPL017C	ALD3	P54114	506 aa		13.87	□□□□□ -0.19
IRC15	YPL017C	SGD1	Q06132	899 aa		13.87	□□□□□ -0.19
IRC15	YPL017C	ATE1	P16639	503 aa		13.86	□□□□□ -0.19
IRC15	YPL017C	RER2	P35196	286 aa		13.86	□□□□□ -0.19
IRC15	YPL017C	SPN1	Q06505	410 aa	Predicted RBP	13.86	□□□□□ -0.19
IRC15	YPL017C	RIX7	Q07844	837 aa	Known RBP	13.86	□□□□□ -0.19
IRC15	YPL017C	PMD1	P32634	1753 aa		13.86	□□□□□ -0.19
IRC15	YPL017C	GPA1	P08539	472 aa		13.85	□□□□□ -0.19
IRC15	YPL017C	MNN4	P36044	1178 aa		13.85	□□□□□ -0.19
IRC15	YPL017C	CHO2	P05374	869 aa	Known RBP	13.85	□□□□□ -0.19
IRC15	YPL017C	SPL2	P38839	148 aa		13.85	□□□□□ -0.19
IRC15	YPL017C	UTP22	P53254	1237 aa	Predicted RBP	13.85	□□□□□ -0.19
IRC15	YPL017C	VMS1	Q04311	632 aa	Known RBP	13.85	□□□□□ -0.19
IRC15	YPL017C	TAF13	P11747	167 aa		13.84	□□□□□ -0.19
IRC15	YPL017C	CAB3	P36076	571 aa		13.84	□□□□□ -0.19
IRC15	YPL017C	YER130C	P39959	443 aa		13.84	□□□□□ -0.19
IRC15	YPL017C	NUG1	P40010	520 aa	Known RBP	13.84	□□□□□ -0.19
IRC15	YPL017C	UBP10	P53874	792 aa	Predicted RBP	13.84	□□□□□ -0.19
IRC15	YPL017C	SYF1	Q04048	859 aa	Predicted RBP	13.84	□□□□□ -0.19
IRC15	YPL017C	EST2	Q06163	884 aa		13.84	□□□□□ -0.19
IRC15	YPL017C	DIB1	Q06819	143 aa	Predicted RBP	13.84	□□□□□ -0.19
IRC15	YPL017C	BDF2	Q07442	638 aa		13.84	□□□□□ -0.19
IRC15	YPL017C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	13.83	□□□□□ -0.2	not detected
IRC15	YPL017C	UBP1	P25037	809 aa		13.83	□□□□□ -0.2
IRC15	YPL017C	MPE1	P35728	441 aa	Known RBP	13.83	□□□□□ -0.2
IRC15	YPL017C	FIG2	P25653	1609 aa		13.82	□□□□□ -0.2
IRC15	YPL017C	CAF20	P12962	161 aa	Known RBP	13.82	□□□□□ -0.2

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms