RNA–Protein interactions for RNA: YOR261C

RPN8, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN8, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN8YOR261C GPM1P00950 247 aaKnown RBP7.5□□□□□ -1.21
RPN8YOR261C PDC6P26263 563 aaKnown RBP7.5□□□□□ -1.21
RPN8YOR261C MLF3P32047 452 aa7.5□□□□□ -1.21
RPN8YOR261C CDC3P32457 520 aaKnown RBP7.5□□□□□ -1.21
RPN8YOR261C SCD5P34758 872 aa7.5□□□□□ -1.21
RPN8YOR261C SLN1P39928 1220 aaPredicted RBP7.49□□□□□ -1.21
RPN8YOR261C UTP4Q06679 776 aaKnown RBP7.49□□□□□ -1.21
RPN8YOR261C YDR215CQ12240 137 aa7.49□□□□□ -1.21
RPN8YOR261C LEU1P07264 779 aaKnown RBP7.47□□□□□ -1.21
RPN8YOR261C MRPL33P20084 86 aa7.46□□□□□ -1.22
RPN8YOR261C ISC10P32645 267 aa7.46□□□□□ -1.22
RPN8YOR261C AMN1P38285 549 aaPredicted RBP7.46□□□□□ -1.22
RPN8YOR261C BOL3P39724 118 aa7.46□□□□□ -1.22
RPN8YOR261C ALD2P47771 506 aa7.46□□□□□ -1.22
RPN8YOR261C MCA1Q08601 432 aa7.46□□□□□ -1.22
RPN8YOR261C YTA6P40328 754 aa7.45□□□□□ -1.22
RPN8YOR261C FOX2Q02207 900 aaKnown RBP7.45□□□□□ -1.22
RPN8YOR261C LSO1Q3E827 93 aa7.45□□□□□ -1.22
RPN8YOR261C RRN6P32786 894 aa7.44□□□□□ -1.22
RPN8YOR261C BOI1P38041 980 aaKnown RBP7.44□□□□□ -1.22
RPN8YOR261C BOI2P39969 1040 aa7.44□□□□□ -1.22
RPN8YOR261C VMA3P25515 160 aa7.43□□□□□ -1.22
RPN8YOR261C KAP122P32767 1081 aa7.43□□□□□ -1.22
RPN8YOR261C FUR4P05316 633 aaKnown RBP7.42□□□□□ -1.22
RPN8YOR261C KAR5Q04746 504 aa7.42□□□□□ -1.22
RPN8YOR261C FPS1P23900 669 aa7.41□□□□□ -1.22
RPN8YOR261C MRPL16P38064 232 aa7.41□□□□□ -1.22
RPN8YOR261C RGP1P16664 663 aa7.4□□□□□ -1.22
RPN8YOR261C QDR2P40474 542 aa7.4□□□□□ -1.22
RPN8YOR261C MTO1P53070 669 aa7.4□□□□□ -1.22
RPN8YOR261C APC11Q12157 165 aa7.4□□□□□ -1.22
RPN8YOR261C HAT1Q12341 374 aa7.4□□□□□ -1.22
RPN8YOR261C TRL1P09880 827 aaKnown RBP7.39□□□□□ -1.23
RPN8YOR261C RPC31P17890 251 aa7.39□□□□□ -1.23
RPN8YOR261C SPR3P41901 512 aa7.39□□□□□ -1.23
RPN8YOR261C LSB6P42951 607 aa7.39□□□□□ -1.23
RPN8YOR261C SKP1P52286 194 aa7.38□□□□□ -1.23
RPN8YOR261C KTR2P33550 425 aa7.37□□□□□ -1.23
RPN8YOR261C LDH1P38139 375 aa7.37□□□□□ -1.23
RPN8YOR261C STB3Q12427 513 aa7.37□□□□□ -1.23
RPN8YOR261C PDC5P16467 563 aaKnown RBP7.36□□□□□ -1.23
RPN8YOR261C NAB2P32505 525 aaKnown RBP RIP-Chip data7.36□□□□□ -1.23 RIP-Chip
RPN8YOR261C DYS1P38791 387 aa7.36□□□□□ -1.23
RPN8YOR261C ERP5P38819 212 aa7.36□□□□□ -1.23
RPN8YOR261C ATG1P53104 897 aa7.36□□□□□ -1.23
RPN8YOR261C CUS1Q02554 436 aaPredicted RBP7.35□□□□□ -1.23
RPN8YOR261C YBL113CQ7M4S9 792 aa7.35□□□□□ -1.23
RPN8YOR261C GLO3P38682 493 aaKnown RBP7.34□□□□□ -1.23
RPN8YOR261C QDR1P40475 563 aa7.34□□□□□ -1.23
RPN8YOR261C MDJ2P42834 146 aa7.34□□□□□ -1.23
RPN8YOR261C ACF4P47129 309 aa7.34□□□□□ -1.23
RPN8YOR261C KNS1P32350 737 aaPredicted RBP7.33□□□□□ -1.24
RPN8YOR261C SSF1P38789 453 aaPredicted RBP7.33□□□□□ -1.24
RPN8YOR261C HXT8P40886 569 aa7.33□□□□□ -1.24
RPN8YOR261C PRY1P47032 299 aa7.33□□□□□ -1.24
RPN8YOR261C RPB10P22139 70 aa7.32□□□□□ -1.24
RPN8YOR261C MSN1P22148 382 aa7.32□□□□□ -1.24
RPN8YOR261C SUT1P53032 299 aaKnown RBP7.32□□□□□ -1.24
RPN8YOR261C YNR040WP53736 256 aa7.32□□□□□ -1.24
RPN8YOR261C YOR296WQ08748 1289 aa7.32□□□□□ -1.24
RPN8YOR261C MET1P36150 593 aa7.31□□□□□ -1.24
RPN8YOR261C TAT1P38085 619 aa7.31□□□□□ -1.24
RPN8YOR261C GIP1P38229 639 aa7.31□□□□□ -1.24
RPN8YOR261C MSC7P38694 644 aa7.31□□□□□ -1.24
RPN8YOR261C APM2P38700 605 aa7.31□□□□□ -1.24
RPN8YOR261C TY1A-DR2Q03964 440 aaKnown RBP7.31□□□□□ -1.24
RPN8YOR261C RPP1AP05318 106 aaPredicted RBP7.3□□□□□ -1.24
RPN8YOR261C BSD2P38356 321 aa7.3□□□□□ -1.24
RPN8YOR261C GRS1P38088 690 aaKnown RBP7.29□□□□□ -1.24
RPN8YOR261C ITC1P53125 1264 aa7.29□□□□□ -1.24
RPN8YOR261C ISW1P38144 1129 aa7.28□□□□□ -1.24
RPN8YOR261C RGD2P43556 714 aa7.28□□□□□ -1.24
RPN8YOR261C SMC1P32908 1225 aa7.27□□□□□ -1.25
RPN8YOR261C MAC1P35192 417 aa7.27□□□□□ -1.25
RPN8YOR261C NCL1P38205 684 aaKnown RBP7.27□□□□□ -1.25
RPN8YOR261C HEH2Q03281 663 aa7.27□□□□□ -1.25
RPN8YOR261C YML020WQ03722 664 aa7.27□□□□□ -1.25
RPN8YOR261C FIR1P40020 876 aa7.26□□□□□ -1.25
RPN8YOR261C NTA1P40354 457 aa7.26□□□□□ -1.25
RPN8YOR261C YPL034WQ03083 165 aa7.26□□□□□ -1.25
RPN8YOR261C ALO1P54783 526 aaKnown RBP7.25□□□□□ -1.25
RPN8YOR261C TRS120Q04183 1289 aa7.25□□□□□ -1.25
RPN8YOR261C NOP8Q08287 484 aaPredicted RBP7.25□□□□□ -1.25
RPN8YOR261C MNL2Q12205 849 aa7.25□□□□□ -1.25
RPN8YOR261C RAD55P38953 406 aa7.24□□□□□ -1.25
RPN8YOR261C YIL165CP40446 119 aa7.24□□□□□ -1.25
RPN8YOR261C NUT2Q06213 157 aa7.24□□□□□ -1.25
RPN8YOR261C EMG1Q06287 252 aaKnown RBP7.24□□□□□ -1.25
RPN8YOR261C FRT1Q99332 602 aa7.24□□□□□ -1.25
RPN8YOR261C YBR287WP38355 427 aa7.23□□□□□ -1.25
RPN8YOR261C STM1P39015 273 aaKnown RBP7.23□□□□□ -1.25
RPN8YOR261C UFD2P54860 961 aa7.23□□□□□ -1.25
RPN8YOR261C YHL050CP38721 697 aa7.22□□□□□ -1.25
RPN8YOR261C YHR219WP38900 624 aa7.22□□□□□ -1.25
RPN8YOR261C YER156CP40093 338 aaKnown RBP7.22□□□□□ -1.25
RPN8YOR261C PRK1P40494 810 aa7.22□□□□□ -1.25
RPN8YOR261C RSC4Q02206 625 aa7.22□□□□□ -1.25
RPN8YOR261C SEN54Q02825 467 aaPredicted RBP7.22□□□□□ -1.25
RPN8YOR261C TIF6Q12522 245 aaKnown RBP7.22□□□□□ -1.25
RPN8YOR261C IRS4P36115 615 aaKnown RBP7.21□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms