RNA–Protein interactions for RNA: YOR216C

RUD3, Transcript of Golgi matrix protein, yeast

Gene RUD3, Length 1,455 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RUD3	YOR216C	RTG2	P32608	588 aa	Known RBP	6.22	□□□□□ -1.41
RUD3	YOR216C	OMA1	P36163	345 aa		6.22	□□□□□ -1.41
RUD3	YOR216C	NCL1	P38205	684 aa	Known RBP	6.19	□□□□□ -1.42
RUD3	YOR216C	ACS2	P52910	683 aa	Known RBP	6.19	□□□□□ -1.42
RUD3	YOR216C	ARI1	P53111	347 aa	Known RBP	6.18	□□□□□ -1.42
RUD3	YOR216C	SAC7	P17121	654 aa		6.17	□□□□□ -1.42
RUD3	YOR216C	SFA1	P32771	386 aa		6.17	□□□□□ -1.42
RUD3	YOR216C	CUS1	Q02554	436 aa	Predicted RBP	6.17	□□□□□ -1.42
RUD3	YOR216C	UBP1	P25037	809 aa		6.16	□□□□□ -1.42
RUD3	YOR216C	YNR040W	P53736	256 aa		6.16	□□□□□ -1.42
RUD3	YOR216C	PHO87	P25360	923 aa		6.15	□□□□□ -1.42
RUD3	YOR216C	KAP122	P32767	1081 aa		6.15	□□□□□ -1.42
RUD3	YOR216C	HXT5	P38695	592 aa		6.15	□□□□□ -1.42
RUD3	YOR216C	KTR7	P40504	517 aa		6.15	□□□□□ -1.42
RUD3	YOR216C	RPL34B	P40525	121 aa	Known RBP	6.15	□□□□□ -1.42
RUD3	YOR216C	SCD5	P34758	872 aa		6.15	□□□□□ -1.43
RUD3	YOR216C	GAS5	Q08193	484 aa		6.15	□□□□□ -1.43
RUD3	YOR216C	RPC31	P17890	251 aa		6.14	□□□□□ -1.43
RUD3	YOR216C	APM2	P38700	605 aa		6.14	□□□□□ -1.43
RUD3	YOR216C	RRM3	P38766	723 aa		6.13	□□□□□ -1.43
RUD3	YOR216C	GAS4	Q08271	471 aa		6.13	□□□□□ -1.43
RUD3	YOR216C	SLP1	Q12232	587 aa		6.13	□□□□□ -1.43
RUD3	YOR216C	HAP4	P14064	554 aa		6.12	□□□□□ -1.43
RUD3	YOR216C	NGR1	P32831	672 aa	Known RBP	6.12	□□□□□ -1.43
RUD3	YOR216C	MRP10	O75012	95 aa		6.11	□□□□□ -1.43
RUD3	YOR216C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	6.09	□□□□□ -1.43	RIP-Chip
RUD3	YOR216C	ROM1	P53046	1155 aa		6.09	□□□□□ -1.43
RUD3	YOR216C	MED7	Q08278	222 aa		6.09	□□□□□ -1.43
RUD3	YOR216C	YKR073C	P36153	106 aa		6.09	□□□□□ -1.44
RUD3	YOR216C	YER156C	P40093	338 aa	Known RBP	6.09	□□□□□ -1.44
RUD3	YOR216C	QDR2	P40474	542 aa		6.09	□□□□□ -1.44
RUD3	YOR216C	YLR122C	Q12312	125 aa		6.08	□□□□□ -1.44
RUD3	YOR216C	IDI1	P15496	288 aa		6.07	□□□□□ -1.44
RUD3	YOR216C	KAE1	P36132	386 aa		6.07	□□□□□ -1.44
RUD3	YOR216C	AVT1	P47082	602 aa		6.07	□□□□□ -1.44
RUD3	YOR216C	AOS1	Q06624	347 aa		6.07	□□□□□ -1.44
RUD3	YOR216C	TRP3	P00937	484 aa		6.06	□□□□□ -1.44
RUD3	YOR216C	GAL2	P13181	574 aa		6.06	□□□□□ -1.44
RUD3	YOR216C	COQ2	P32378	372 aa		6.06	□□□□□ -1.44
RUD3	YOR216C	HGH1	P48362	394 aa	Known RBP	6.06	□□□□□ -1.44
RUD3	YOR216C	ITC1	P53125	1264 aa		6.05	□□□□□ -1.44
RUD3	YOR216C	RSC6	P25632	483 aa		6.04	□□□□□ -1.44
RUD3	YOR216C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	6.04	□□□□□ -1.44	not detected
RUD3	YOR216C	ELM1	P32801	640 aa		6.04	□□□□□ -1.44
RUD3	YOR216C	TY4B-P	A0A0B7P3V8	1104 aa		6.03	□□□□□ -1.44
RUD3	YOR216C	CTH1	P47976	325 aa		6.03	□□□□□ -1.44
RUD3	YOR216C	TY4A-H	Q6Q5P6	413 aa		6.03	□□□□□ -1.44
RUD3	YOR216C	VAN1	P23642	535 aa		6.02	□□□□□ -1.44
RUD3	YOR216C	SAF1	P38352	637 aa		6.02	□□□□□ -1.44
RUD3	YOR216C	CAB1	Q04430	367 aa		6.02	□□□□□ -1.44
RUD3	YOR216C	TY1A-NL1	Q12391	440 aa	Known RBP	6.02	□□□□□ -1.44
RUD3	YOR216C	SUV3	P32580	737 aa		6.02	□□□□□ -1.45
RUD3	YOR216C	SIS2	P36024	562 aa		6.02	□□□□□ -1.45
RUD3	YOR216C	TOS1	P38288	455 aa		6.01	□□□□□ -1.45
RUD3	YOR216C	YOR296W	Q08748	1289 aa		6.01	□□□□□ -1.45
RUD3	YOR216C	VMA3	P25515	160 aa		6	□□□□□ -1.45
RUD3	YOR216C	TED1	P40533	473 aa		5.99	□□□□□ -1.45
RUD3	YOR216C	CWH41	P53008	833 aa		5.99	□□□□□ -1.45
RUD3	YOR216C	BRE4	Q07660	1125 aa		5.99	□□□□□ -1.45
RUD3	YOR216C	MRPL33	P20084	86 aa		5.98	□□□□□ -1.45
RUD3	YOR216C	LIP5	P32875	414 aa		5.98	□□□□□ -1.45
RUD3	YOR216C	BSD2	P38356	321 aa		5.98	□□□□□ -1.45
RUD3	YOR216C	GIP2	P40036	548 aa		5.98	□□□□□ -1.45
RUD3	YOR216C	TRS33	Q99394	268 aa		5.98	□□□□□ -1.45
RUD3	YOR216C	CHS2	P14180	963 aa		5.97	□□□□□ -1.45
RUD3	YOR216C	TGL4	P36165	910 aa		5.97	□□□□□ -1.45
RUD3	YOR216C	DSE4	P53753	1117 aa		5.97	□□□□□ -1.45
RUD3	YOR216C	DYS1	P38791	387 aa		5.96	□□□□□ -1.45
RUD3	YOR216C	SOK2	P53438	785 aa	Predicted RBP	5.96	□□□□□ -1.45
RUD3	YOR216C	FOX2	Q02207	900 aa	Known RBP	5.96	□□□□□ -1.45
RUD3	YOR216C	ECM23	Q02710	187 aa		5.96	□□□□□ -1.45
RUD3	YOR216C	MAG2	Q06436	670 aa	Known RBP	5.96	□□□□□ -1.45
RUD3	YOR216C	GIP1	P38229	639 aa		5.96	□□□□□ -1.46
RUD3	YOR216C	RSC2	Q06488	889 aa		5.96	□□□□□ -1.46
RUD3	YOR216C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	5.96	□□□□□ -1.46	not detected
RUD3	YOR216C	YBR197C	P38306	217 aa		5.95	□□□□□ -1.46
RUD3	YOR216C	REC8	Q12188	680 aa		5.95	□□□□□ -1.46
RUD3	YOR216C	TTI1	P36097	1038 aa		5.94	□□□□□ -1.46
RUD3	YOR216C	SPO74	P45819	413 aa		5.94	□□□□□ -1.46
RUD3	YOR216C	YGR130C	P53278	816 aa		5.94	□□□□□ -1.46
RUD3	YOR216C	LDH1	P38139	375 aa		5.93	□□□□□ -1.46
RUD3	YOR216C	NAM7	P30771	971 aa	Known RBP	5.92	□□□□□ -1.46
RUD3	YOR216C	YJL181W	P46987	611 aa		5.92	□□□□□ -1.46
RUD3	YOR216C	UBX7	P38349	436 aa		5.91	□□□□□ -1.46
RUD3	YOR216C	YIL165C	P40446	119 aa		5.91	□□□□□ -1.46
RUD3	YOR216C	PPT1	P53043	513 aa		5.91	□□□□□ -1.46
RUD3	YOR216C	CYC7	P00045	113 aa		5.9	□□□□□ -1.47
RUD3	YOR216C	ISW1	P38144	1129 aa		5.9	□□□□□ -1.47
RUD3	YOR216C	AKR1	P39010	764 aa		5.9	□□□□□ -1.47
RUD3	YOR216C	LEM3	P42838	414 aa		5.9	□□□□□ -1.47
RUD3	YOR216C	ISC10	P32645	267 aa		5.89	□□□□□ -1.47
RUD3	YOR216C	MSB1	P21339	1137 aa	Known RBP	5.88	□□□□□ -1.47
RUD3	YOR216C	MSN1	P22148	382 aa		5.88	□□□□□ -1.47
RUD3	YOR216C	ALD4	P46367	519 aa	Known RBP	5.88	□□□□□ -1.47
RUD3	YOR216C	GUP1	P53154	560 aa		5.88	□□□□□ -1.47
RUD3	YOR216C	PAN5	P38787	379 aa		5.87	□□□□□ -1.47
RUD3	YOR216C	UBP5	P39944	805 aa		5.87	□□□□□ -1.47
RUD3	YOR216C	INP51	P40559	946 aa	Known RBP	5.87	□□□□□ -1.47
RUD3	YOR216C	SOG2	Q08817	791 aa		5.87	□□□□□ -1.47
RUD3	YOR216C	EMG1	Q06287	252 aa	Known RBP	5.86	□□□□□ -1.47

Retrieved 100 of 5,963 RNA–protein pairs in 803.5 ms