RNA–Protein interactions for RNA: YNR001C

CIT1, Transcript of Citrate synthase, yeastyeast

Gene CIT1, Length 1,440 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT1YNR001C FPS1P23900 669 aa5.33□□□□□ -1.56
CIT1YNR001C UBP1P25037 809 aa5.33□□□□□ -1.56
CIT1YNR001C TY1A-DR2Q03964 440 aaKnown RBP5.33□□□□□ -1.56
CIT1YNR001C MDS3P53094 1487 aa5.33□□□□□ -1.56
CIT1YNR001C GAL2P13181 574 aa5.32□□□□□ -1.56
CIT1YNR001C RGP1P16664 663 aa5.32□□□□□ -1.56
CIT1YNR001C CDC3P32457 520 aaKnown RBP5.32□□□□□ -1.56
CIT1YNR001C HAP4P14064 554 aa5.31□□□□□ -1.56
CIT1YNR001C CPS1P27614 576 aa5.31□□□□□ -1.56
CIT1YNR001C HEM3P28789 327 aa5.31□□□□□ -1.56
CIT1YNR001C HXT5P38695 592 aa5.31□□□□□ -1.56
CIT1YNR001C GAS4Q08271 471 aa5.31□□□□□ -1.56
CIT1YNR001C TGL4P36165 910 aa5.31□□□□□ -1.56
CIT1YNR001C YNR014WP53719 212 aa5.31□□□□□ -1.56
CIT1YNR001C PDC5P16467 563 aaKnown RBP5.3□□□□□ -1.56
CIT1YNR001C NGR1P32831 672 aaKnown RBP5.3□□□□□ -1.56
CIT1YNR001C SIS2P36024 562 aa5.3□□□□□ -1.56
CIT1YNR001C SUV3P32580 737 aa5.29□□□□□ -1.56
CIT1YNR001C YCK2P23292 546 aaKnown RBP5.28□□□□□ -1.56
CIT1YNR001C RRN6P32786 894 aa5.28□□□□□ -1.56
CIT1YNR001C YTA6P40328 754 aa5.28□□□□□ -1.56
CIT1YNR001C ECM23Q02710 187 aa5.28□□□□□ -1.56
CIT1YNR001C KNS1P32350 737 aaPredicted RBP5.27□□□□□ -1.57
CIT1YNR001C MTO1P53070 669 aa5.27□□□□□ -1.57
CIT1YNR001C UTP4Q06679 776 aaKnown RBP5.27□□□□□ -1.57
CIT1YNR001C YDR215CQ12240 137 aa5.27□□□□□ -1.57
CIT1YNR001C IRC20Q06554 1556 aa5.27□□□□□ -1.57
CIT1YNR001C SKP1P52286 194 aa5.26□□□□□ -1.57
CIT1YNR001C BPT1P14772 1559 aa5.26□□□□□ -1.57
CIT1YNR001C PUP1P25043 261 aa5.25□□□□□ -1.57
CIT1YNR001C SCD5P34758 872 aa5.25□□□□□ -1.57
CIT1YNR001C PAM1P37304 830 aaKnown RBP5.25□□□□□ -1.57
CIT1YNR001C BOI2P39969 1040 aa5.25□□□□□ -1.57
CIT1YNR001C YNR040WP53736 256 aa5.25□□□□□ -1.57
CIT1YNR001C CAB1Q04430 367 aa5.25□□□□□ -1.57
CIT1YNR001C BUD4P47136 1447 aa5.25□□□□□ -1.57
CIT1YNR001C RPC31P17890 251 aa5.24□□□□□ -1.57
CIT1YNR001C MET1P36150 593 aa5.24□□□□□ -1.57
CIT1YNR001C AMN1P38285 549 aaPredicted RBP5.24□□□□□ -1.57
CIT1YNR001C SSF1P38789 453 aaPredicted RBP5.24□□□□□ -1.57
CIT1YNR001C PRK1P40494 810 aa5.24□□□□□ -1.57
CIT1YNR001C CUS1Q02554 436 aaPredicted RBP5.24□□□□□ -1.57
CIT1YNR001C HAT1Q12341 374 aa5.24□□□□□ -1.57
CIT1YNR001C MYO2P19524 1574 aaKnown RBP5.24□□□□□ -1.57
CIT1YNR001C PEP1P32319 1579 aa5.24□□□□□ -1.57
CIT1YNR001C DNF1P32660 1571 aa5.24□□□□□ -1.57
CIT1YNR001C VAN1P23642 535 aa5.23□□□□□ -1.57
CIT1YNR001C NAB2P32505 525 aaKnown RBP RIP-Chip data5.23□□□□□ -1.57not detected
CIT1YNR001C KAP122P32767 1081 aa5.23□□□□□ -1.57
CIT1YNR001C SLN1P39928 1220 aaPredicted RBP5.23□□□□□ -1.57
CIT1YNR001C NOB1Q08444 459 aaKnown RBP5.23□□□□□ -1.57
CIT1YNR001C ASF1P32447 279 aa5.23□□□□□ -1.57
CIT1YNR001C UBX7P38349 436 aa5.23□□□□□ -1.57
CIT1YNR001C THO2P53552 1597 aaKnown RBP5.22□□□□□ -1.57
CIT1YNR001C QDR2P40474 542 aa5.22□□□□□ -1.57
CIT1YNR001C BRN1P38170 754 aa5.21□□□□□ -1.58
CIT1YNR001C YML083CQ04526 418 aa5.21□□□□□ -1.58
CIT1YNR001C LTE1P07866 1435 aa5.2□□□□□ -1.58
CIT1YNR001C MRP10O75012 95 aa5.2□□□□□ -1.58
CIT1YNR001C LSB6P42951 607 aa5.2□□□□□ -1.58
CIT1YNR001C SEN54Q02825 467 aaPredicted RBP5.2□□□□□ -1.58
CIT1YNR001C HEH2Q03281 663 aa5.2□□□□□ -1.58
CIT1YNR001C YTA7P40340 1379 aa5.19□□□□□ -1.58
CIT1YNR001C VMA3P25515 160 aa5.19□□□□□ -1.58
CIT1YNR001C YBR197CP38306 217 aa5.19□□□□□ -1.58
CIT1YNR001C STM1P39015 273 aaKnown RBP5.19□□□□□ -1.58
CIT1YNR001C MCA1Q08601 432 aa5.19□□□□□ -1.58
CIT1YNR001C TRS33Q99394 268 aa5.19□□□□□ -1.58
CIT1YNR001C RPP1AP05318 106 aaPredicted RBP5.18□□□□□ -1.58
CIT1YNR001C MRPL33P20084 86 aa5.18□□□□□ -1.58
CIT1YNR001C PGM2P37012 569 aaKnown RBP5.18□□□□□ -1.58
CIT1YNR001C NCL1P38205 684 aaKnown RBP5.18□□□□□ -1.58
CIT1YNR001C APM2P38700 605 aa5.18□□□□□ -1.58
CIT1YNR001C ITC1P53125 1264 aa5.18□□□□□ -1.58
CIT1YNR001C FOX2Q02207 900 aaKnown RBP5.18□□□□□ -1.58
CIT1YNR001C NAR1P23503 491 aaKnown RBP5.17□□□□□ -1.58
CIT1YNR001C SEC20P28791 383 aa5.17□□□□□ -1.58
CIT1YNR001C TAT1P38085 619 aa5.17□□□□□ -1.58
CIT1YNR001C ALD4P46367 519 aaKnown RBP5.17□□□□□ -1.58
CIT1YNR001C PRY1P47032 299 aa5.17□□□□□ -1.58
CIT1YNR001C HIR3P47171 1648 aa5.17□□□□□ -1.58
CIT1YNR001C GLT1Q12680 2145 aaKnown RBP5.16□□□□□ -1.58
CIT1YNR001C TOP1P04786 769 aa5.16□□□□□ -1.58
CIT1YNR001C IDI1P15496 288 aa5.16□□□□□ -1.58
CIT1YNR001C BSD2P38356 321 aa5.16□□□□□ -1.58
CIT1YNR001C CWH41P53008 833 aa5.16□□□□□ -1.58
CIT1YNR001C MMS1Q06211 1407 aa5.16□□□□□ -1.58
CIT1YNR001C MAC1P35192 417 aa5.15□□□□□ -1.58
CIT1YNR001C ALG14P38242 237 aa5.15□□□□□ -1.58
CIT1YNR001C GIS4Q04233 774 aa5.15□□□□□ -1.58
CIT1YNR001C ISC10P32645 267 aa5.14□□□□□ -1.59
CIT1YNR001C TPS3P38426 1054 aaKnown RBP5.14□□□□□ -1.59
CIT1YNR001C CDC25P04821 1589 aa5.14□□□□□ -1.59
CIT1YNR001C TAF2P23255 1407 aa5.14□□□□□ -1.59
CIT1YNR001C YCF1P39109 1515 aaKnown RBP5.14□□□□□ -1.59
CIT1YNR001C KTR2P33550 425 aa5.14□□□□□ -1.59
CIT1YNR001C IPL1P38991 367 aa5.14□□□□□ -1.59
CIT1YNR001C CWC15Q03772 175 aaKnown RBP5.14□□□□□ -1.59
CIT1YNR001C YOR296WQ08748 1289 aa5.14□□□□□ -1.59
CIT1YNR001C RPA190P10964 1664 aaKnown RBP5.13□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms