RNA–Protein interactions for RNA: YMR308C

PSE1, Transcript of Karyopherin/importin that interacts with the nuclear pore complex, yeastyeast

Gene PSE1, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PSE1YMR308C RRP8P38961 392 aaKnown RBP5.58□□□□□ -1.52
PSE1YMR308C CHZ1P40019 153 aaPredicted RBP5.58□□□□□ -1.52
PSE1YMR308C YMR1P47147 688 aaKnown RBP RIP-Chip data5.58□□□□□ -1.52not detected
PSE1YMR308C RSM28Q03430 361 aa5.58□□□□□ -1.52
PSE1YMR308C SLD2P34252 453 aa5.57□□□□□ -1.52
PSE1YMR308C TBS1P38114 1094 aa5.57□□□□□ -1.52
PSE1YMR308C MXR1P40029 184 aa5.57□□□□□ -1.52
PSE1YMR308C PXR1P53335 271 aaPredicted RBP5.57□□□□□ -1.52
PSE1YMR308C VPS30Q02948 557 aa5.57□□□□□ -1.52
PSE1YMR308C SSQ1Q05931 657 aaPredicted RBP5.57□□□□□ -1.52
PSE1YMR308C DBP9Q06218 594 aaKnown RBP5.57□□□□□ -1.52
PSE1YMR308C GRC3Q07845 632 aa5.57□□□□□ -1.52
PSE1YMR308C SAS3P34218 831 aa5.57□□□□□ -1.52
PSE1YMR308C EXO84P38261 753 aa5.57□□□□□ -1.52
PSE1YMR308C HOL1P53389 586 aa5.57□□□□□ -1.52
PSE1YMR308C SPO19Q03029 223 aa5.57□□□□□ -1.52
PSE1YMR308C TAP42Q04372 366 aa5.57□□□□□ -1.52
PSE1YMR308C TCB1Q12466 1186 aa5.57□□□□□ -1.52
PSE1YMR308C YBL111CQ3E7Y5 667 aa5.57□□□□□ -1.52
PSE1YMR308C SNF7P39929 240 aaKnown RBP5.57□□□□□ -1.52
PSE1YMR308C FMP10P40098 244 aa5.57□□□□□ -1.52
PSE1YMR308C YPP1P46951 817 aa5.57□□□□□ -1.52
PSE1YMR308C VTC4P47075 721 aa5.57□□□□□ -1.52
PSE1YMR308C YGR016WP53209 190 aa5.57□□□□□ -1.52
PSE1YMR308C YPL191CQ08930 360 aa5.57□□□□□ -1.52
PSE1YMR308C AAD3P25612 363 aa5.56□□□□□ -1.52
PSE1YMR308C YEL1P34225 687 aa5.56□□□□□ -1.52
PSE1YMR308C APE4P38821 490 aa5.56□□□□□ -1.52
PSE1YMR308C MER1P16523 270 aa5.56□□□□□ -1.52
PSE1YMR308C SWC3P31376 625 aa5.56□□□□□ -1.52
PSE1YMR308C TFC3P34111 1160 aa5.56□□□□□ -1.52
PSE1YMR308C STO1P34160 861 aaKnown RBP5.56□□□□□ -1.52
PSE1YMR308C YTA6P40328 754 aa5.56□□□□□ -1.52
PSE1YMR308C UTP18P40362 594 aaPredicted RBP5.56□□□□□ -1.52
PSE1YMR308C IAH1P41734 238 aa5.56□□□□□ -1.52
PSE1YMR308C NNF1P47149 201 aa5.56□□□□□ -1.52
PSE1YMR308C UBP10P53874 792 aaPredicted RBP5.56□□□□□ -1.52
PSE1YMR308C PEX19Q07418 342 aa5.56□□□□□ -1.52
PSE1YMR308C PHO84P25297 587 aaKnown RBP5.56□□□□□ -1.52
PSE1YMR308C SMY1P32364 656 aaKnown RBP5.56□□□□□ -1.52
PSE1YMR308C TIF3P34167 436 aaKnown RBP5.56□□□□□ -1.52
PSE1YMR308C GGA2P38817 585 aaKnown RBP5.56□□□□□ -1.52
PSE1YMR308C RIM21P48565 533 aa5.56□□□□□ -1.52
PSE1YMR308C SLX4Q12098 748 aa5.56□□□□□ -1.52
PSE1YMR308C SKI3P17883 1432 aaKnown RBP5.55□□□□□ -1.52
PSE1YMR308C OTU2P38747 307 aaKnown RBP5.55□□□□□ -1.52
PSE1YMR308C YIR042CP40586 236 aa5.55□□□□□ -1.52
PSE1YMR308C SUM1P46676 1062 aa5.55□□□□□ -1.52
PSE1YMR308C ACF4P47129 309 aa5.55□□□□□ -1.52
PSE1YMR308C SRB7P47822 140 aa5.55□□□□□ -1.52
PSE1YMR308C SXM1Q04175 944 aaKnown RBP5.55□□□□□ -1.52
PSE1YMR308C LEU1P07264 779 aaKnown RBP5.55□□□□□ -1.52
PSE1YMR308C MPH2P0CD99 609 aa5.55□□□□□ -1.52
PSE1YMR308C APL2P36000 726 aaPredicted RBP5.55□□□□□ -1.52
PSE1YMR308C ERC1P38767 581 aa5.55□□□□□ -1.52
PSE1YMR308C CIT2P08679 460 aa5.54□□□□□ -1.52
PSE1YMR308C SEC15P22224 910 aa5.54□□□□□ -1.52
PSE1YMR308C RTG3P38165 486 aa5.54□□□□□ -1.52
PSE1YMR308C EFB1P32471 206 aaKnown RBP5.54□□□□□ -1.52
PSE1YMR308C RRF1P38771 230 aa5.54□□□□□ -1.52
PSE1YMR308C LAM5P43560 674 aa5.54□□□□□ -1.52
PSE1YMR308C ALG2P43636 503 aa5.54□□□□□ -1.52
PSE1YMR308C SET2P46995 733 aaKnown RBP5.54□□□□□ -1.52
PSE1YMR308C ALG12P53730 551 aa5.54□□□□□ -1.52
PSE1YMR308C RAD16P31244 790 aa5.54□□□□□ -1.52
PSE1YMR308C TOM71P38825 639 aaKnown RBP5.54□□□□□ -1.52
PSE1YMR308C YGR153WP48238 217 aa5.54□□□□□ -1.52
PSE1YMR308C RAD33Q04231 177 aa5.54□□□□□ -1.52
PSE1YMR308C ISA1Q07821 250 aaPredicted RBP5.54□□□□□ -1.52
PSE1YMR308C RPB4P20433 221 aaPredicted RBP5.53□□□□□ -1.52
PSE1YMR308C BIO2P32451 375 aa5.53□□□□□ -1.52
PSE1YMR308C HIR2P32480 875 aa5.53□□□□□ -1.52
PSE1YMR308C ATG14P38270 344 aa5.53□□□□□ -1.52
PSE1YMR308C YLH47Q06493 454 aa5.53□□□□□ -1.52
PSE1YMR308C PKC1P24583 1151 aa5.53□□□□□ -1.52
PSE1YMR308C APD1P38281 316 aa5.53□□□□□ -1.52
PSE1YMR308C SHE4P51534 789 aa5.53□□□□□ -1.52
PSE1YMR308C PSE1P32337 1089 aaKnown RBP5.52□□□□□ -1.53
PSE1YMR308C SWH1P35845 1188 aa5.52□□□□□ -1.53
PSE1YMR308C YMR111CQ04461 462 aaPredicted RBP5.52□□□□□ -1.53
PSE1YMR308C YOL098CQ12496 1037 aa5.52□□□□□ -1.53
PSE1YMR308C PET494P07390 489 aaPredicted RBP5.52□□□□□ -1.53
PSE1YMR308C CLB1P24868 471 aa5.52□□□□□ -1.53
PSE1YMR308C SSZ1P38788 538 aaKnown RBP5.52□□□□□ -1.53
PSE1YMR308C MPH1P40562 993 aa5.52□□□□□ -1.53
PSE1YMR308C NUP42P49686 430 aaKnown RBP5.52□□□□□ -1.53
PSE1YMR308C ALF1P53904 254 aa5.52□□□□□ -1.53
PSE1YMR308C RTC1Q08281 1341 aa5.52□□□□□ -1.53
PSE1YMR308C URA1P28272 314 aaPredicted RBP5.52□□□□□ -1.53
PSE1YMR308C BFR1P38934 470 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
PSE1YMR308C SHC1P39000 512 aa5.52□□□□□ -1.53
PSE1YMR308C ADE12P80210 433 aaKnown RBP5.52□□□□□ -1.53
PSE1YMR308C SWA2Q06677 668 aa5.52□□□□□ -1.53
PSE1YMR308C RAD3P06839 778 aa5.51□□□□□ -1.53
PSE1YMR308C DPH5P32469 300 aaPredicted RBP5.51□□□□□ -1.53
PSE1YMR308C PPG1P32838 368 aa5.51□□□□□ -1.53
PSE1YMR308C PTR2P32901 601 aa5.51□□□□□ -1.53
PSE1YMR308C SMY2P32909 740 aaKnown RBP5.51□□□□□ -1.53
PSE1YMR308C UBP14P38237 781 aaKnown RBP5.51□□□□□ -1.53
PSE1YMR308C GUA1P38625 525 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms