RNA–Protein interactions for RNA: YMR016C

SOK2, Transcript of Nuclear protein that negatively regulates pseudohyphal differentiation, yeastyeast

Gene SOK2, Length 2,358 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOK2YMR016C RLF2Q12495 606 aa3.82□□□□□ -1.8
SOK2YMR016C HAP4P14064 554 aa3.82□□□□□ -1.8
SOK2YMR016C PEP12P32854 288 aa3.82□□□□□ -1.8
SOK2YMR016C BIM1P40013 344 aa3.82□□□□□ -1.8
SOK2YMR016C GIS4Q04233 774 aa3.82□□□□□ -1.8
SOK2YMR016C GAS4Q08271 471 aa3.82□□□□□ -1.8
SOK2YMR016C AI3P03877 415 aa3.81□□□□□ -1.8
SOK2YMR016C TIF1P10081 395 aaKnown RBP3.81□□□□□ -1.8
SOK2YMR016C PHO87P25360 923 aa3.81□□□□□ -1.8
SOK2YMR016C KAP122P32767 1081 aa3.81□□□□□ -1.8
SOK2YMR016C SIS2P36024 562 aa3.81□□□□□ -1.8
SOK2YMR016C OMA1P36163 345 aa3.81□□□□□ -1.8
SOK2YMR016C NAR1P23503 491 aaKnown RBP3.81□□□□□ -1.8
SOK2YMR016C APM2P38700 605 aa3.81□□□□□ -1.8
SOK2YMR016C ALO1P54783 526 aaKnown RBP3.81□□□□□ -1.8
SOK2YMR016C CUS1Q02554 436 aaPredicted RBP3.81□□□□□ -1.8
SOK2YMR016C SAC7P17121 654 aa3.8□□□□□ -1.8
SOK2YMR016C ATG32P40458 529 aa3.8□□□□□ -1.8
SOK2YMR016C SFA1P32771 386 aa3.8□□□□□ -1.8
SOK2YMR016C IRC24P40580 263 aa3.8□□□□□ -1.8
SOK2YMR016C INP52P50942 1183 aa3.8□□□□□ -1.8
SOK2YMR016C SLP1Q12232 587 aa3.8□□□□□ -1.8
SOK2YMR016C ACS2P52910 683 aaKnown RBP3.79□□□□□ -1.8
SOK2YMR016C ARI1P53111 347 aaKnown RBP3.79□□□□□ -1.8
SOK2YMR016C INO80P53115 1489 aa3.79□□□□□ -1.8
SOK2YMR016C NGR1P32831 672 aaKnown RBP3.78□□□□□ -1.8
SOK2YMR016C PGM1P33401 570 aaKnown RBP3.78□□□□□ -1.8
SOK2YMR016C COQ2P32378 372 aa3.78□□□□□ -1.8
SOK2YMR016C RRM3P38766 723 aa3.78□□□□□ -1.8
SOK2YMR016C RPC31P17890 251 aa3.77□□□□□ -1.81
SOK2YMR016C HXT5P38695 592 aa3.77□□□□□ -1.81
SOK2YMR016C CWH41P53008 833 aa3.76□□□□□ -1.81
SOK2YMR016C KTR7P40504 517 aa3.76□□□□□ -1.81
SOK2YMR016C VAN1P23642 535 aa3.75□□□□□ -1.81
SOK2YMR016C RSC6P25632 483 aa3.75□□□□□ -1.81
SOK2YMR016C MED7Q08278 222 aa3.75□□□□□ -1.81
SOK2YMR016C KAE1P36132 386 aa3.75□□□□□ -1.81
SOK2YMR016C YER156CP40093 338 aaKnown RBP3.75□□□□□ -1.81
SOK2YMR016C QDR2P40474 542 aa3.75□□□□□ -1.81
SOK2YMR016C YNR040WP53736 256 aa3.75□□□□□ -1.81
SOK2YMR016C IDI1P15496 288 aa3.74□□□□□ -1.81
SOK2YMR016C GAS5Q08193 484 aa3.74□□□□□ -1.81
SOK2YMR016C TRS33Q99394 268 aa3.74□□□□□ -1.81
SOK2YMR016C GAL2P13181 574 aa3.74□□□□□ -1.81
SOK2YMR016C RSC2Q06488 889 aa3.74□□□□□ -1.81
SOK2YMR016C ROM1P53046 1155 aa3.73□□□□□ -1.81
SOK2YMR016C YOR296WQ08748 1289 aa3.73□□□□□ -1.81
SOK2YMR016C DYS1P38791 387 aa3.72□□□□□ -1.81
SOK2YMR016C TY4B-PA0A0B7P3V8 1104 aa3.71□□□□□ -1.81
SOK2YMR016C ITC1P53125 1264 aa3.71□□□□□ -1.81
SOK2YMR016C TY4A-HQ6Q5P6 413 aa3.71□□□□□ -1.81
SOK2YMR016C SAF1P38352 637 aa3.71□□□□□ -1.82
SOK2YMR016C YLR122CQ12312 125 aa3.71□□□□□ -1.82
SOK2YMR016C SPA2P23201 1466 aaKnown RBP3.71□□□□□ -1.82
SOK2YMR016C DSE4P53753 1117 aa3.7□□□□□ -1.82
SOK2YMR016C CHS2P14180 963 aa3.7□□□□□ -1.82
SOK2YMR016C MRPL33P20084 86 aa3.7□□□□□ -1.82
SOK2YMR016C LIP5P32875 414 aa3.7□□□□□ -1.82
SOK2YMR016C GIP1P38229 639 aa3.7□□□□□ -1.82
SOK2YMR016C GIP2P40036 548 aa3.7□□□□□ -1.82
SOK2YMR016C AVT1P47082 602 aa3.7□□□□□ -1.82
SOK2YMR016C SUB2Q07478 446 aaKnown RBP3.7□□□□□ -1.82
SOK2YMR016C MRP10O75012 95 aa3.69□□□□□ -1.82
SOK2YMR016C YKR073CP36153 106 aa3.69□□□□□ -1.82
SOK2YMR016C LDH1P38139 375 aa3.69□□□□□ -1.82
SOK2YMR016C CAB1Q04430 367 aa3.69□□□□□ -1.82
SOK2YMR016C TY1A-NL1Q12391 440 aaKnown RBP3.69□□□□□ -1.82
SOK2YMR016C TRP3P00937 484 aa3.69□□□□□ -1.82
SOK2YMR016C VMA3P25515 160 aa3.69□□□□□ -1.82
SOK2YMR016C PUB1P32588 453 aaKnown RBP RIP-Chip data3.69□□□□□ -1.82not detected
SOK2YMR016C TOS1P38288 455 aa3.69□□□□□ -1.82
SOK2YMR016C YBR287WP38355 427 aa3.69□□□□□ -1.82
SOK2YMR016C TED1P40533 473 aa3.69□□□□□ -1.82
SOK2YMR016C AOS1Q06624 347 aa3.69□□□□□ -1.82
SOK2YMR016C ISW1P38144 1129 aa3.68□□□□□ -1.82
SOK2YMR016C SOK2P53438 785 aaPredicted RBP3.68□□□□□ -1.82
SOK2YMR016C TGL4P36165 910 aa3.67□□□□□ -1.82
SOK2YMR016C LEM3P42838 414 aa3.67□□□□□ -1.82
SOK2YMR016C FOX2Q02207 900 aaKnown RBP3.67□□□□□ -1.82
SOK2YMR016C NOB1Q08444 459 aaKnown RBP3.67□□□□□ -1.82
SOK2YMR016C ELM1P32801 640 aa3.66□□□□□ -1.82
SOK2YMR016C BSD2P38356 321 aa3.66□□□□□ -1.82
SOK2YMR016C YGR130CP53278 816 aa3.66□□□□□ -1.82
SOK2YMR016C BRE4Q07660 1125 aa3.66□□□□□ -1.82
SOK2YMR016C SUV3P32580 737 aa3.66□□□□□ -1.82
SOK2YMR016C AKR1P39010 764 aa3.66□□□□□ -1.82
SOK2YMR016C SPO74P45819 413 aa3.66□□□□□ -1.82
SOK2YMR016C PPT1P53043 513 aa3.66□□□□□ -1.82
SOK2YMR016C GUP1P53154 560 aa3.66□□□□□ -1.82
SOK2YMR016C PUF3Q07807 879 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
SOK2YMR016C YIL165CP40446 119 aa3.65□□□□□ -1.83
SOK2YMR016C ECM23Q02710 187 aa3.65□□□□□ -1.83
SOK2YMR016C REC8Q12188 680 aa3.65□□□□□ -1.83
SOK2YMR016C TTI1P36097 1038 aa3.65□□□□□ -1.83
SOK2YMR016C YBR197CP38306 217 aa3.65□□□□□ -1.83
SOK2YMR016C YJL181WP46987 611 aa3.65□□□□□ -1.83
SOK2YMR016C CTH1P47976 325 aa3.64□□□□□ -1.83
SOK2YMR016C KOG1P38873 1557 aa3.64□□□□□ -1.83
SOK2YMR016C CYC7P00045 113 aa3.63□□□□□ -1.83
SOK2YMR016C MSB1P21339 1137 aaKnown RBP3.63□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms