RNA–Protein interactions for RNA: YLR221C

RSA3, Transcript of Protein with a likely role in ribosomal maturation, yeast

Gene RSA3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA3	YLR221C	MRPL16	P38064	232 aa		8.49	□□□□□ -1.05
RSA3	YLR221C	BOL3	P39724	118 aa		8.49	□□□□□ -1.05
RSA3	YLR221C	MSC6	Q08818	692 aa	Known RBP	8.49	□□□□□ -1.05
RSA3	YLR221C	RPS31	P05759	152 aa	Known RBP	8.48	□□□□□ -1.05
RSA3	YLR221C	FPS1	P23900	669 aa		8.48	□□□□□ -1.05
RSA3	YLR221C	IPL1	P38991	367 aa		8.48	□□□□□ -1.05
RSA3	YLR221C	STB3	Q12427	513 aa		8.48	□□□□□ -1.05
RSA3	YLR221C	NGR1	P32831	672 aa	Known RBP	8.47	□□□□□ -1.05
RSA3	YLR221C	MDJ2	P42834	146 aa		8.47	□□□□□ -1.05
RSA3	YLR221C	NOP7	P53261	605 aa	Known RBP	8.47	□□□□□ -1.05
RSA3	YLR221C	YHL050C	P38721	697 aa		8.46	□□□□□ -1.06
RSA3	YLR221C	YHR219W	P38900	624 aa		8.46	□□□□□ -1.06
RSA3	YLR221C	SBE2	P42223	864 aa	Known RBP	8.46	□□□□□ -1.06
RSA3	YLR221C	ACF4	P47129	309 aa		8.46	□□□□□ -1.06
RSA3	YLR221C	GLO3	P38682	493 aa	Known RBP	8.45	□□□□□ -1.06
RSA3	YLR221C	PPX1	P38698	397 aa		8.45	□□□□□ -1.06
RSA3	YLR221C	MCM1	P11746	286 aa		8.44	□□□□□ -1.06
RSA3	YLR221C	SUV3	P32580	737 aa		8.44	□□□□□ -1.06
RSA3	YLR221C	QDR1	P40475	563 aa		8.44	□□□□□ -1.06
RSA3	YLR221C	YNL165W	P53891	406 aa		8.44	□□□□□ -1.06
RSA3	YLR221C	LSO1	Q3E827	93 aa		8.43	□□□□□ -1.06
RSA3	YLR221C	GPM1	P00950	247 aa	Known RBP	8.42	□□□□□ -1.06
RSA3	YLR221C	LEU1	P07264	779 aa	Known RBP	8.41	□□□□□ -1.06
RSA3	YLR221C	SPR3	P41901	512 aa		8.41	□□□□□ -1.06
RSA3	YLR221C	TDA6	Q06466	467 aa		8.41	□□□□□ -1.06
RSA3	YLR221C	YPR053C	Q6Q5F3	151 aa		8.41	□□□□□ -1.06
RSA3	YLR221C	YTA6	P40328	754 aa		8.4	□□□□□ -1.06
RSA3	YLR221C	ALD2	P47771	506 aa		8.4	□□□□□ -1.06
RSA3	YLR221C	YNR014W	P53719	212 aa		8.4	□□□□□ -1.06
RSA3	YLR221C	MLF3	P32047	452 aa		8.39	□□□□□ -1.07
RSA3	YLR221C	YBR197C	P38306	217 aa		8.38	□□□□□ -1.07
RSA3	YLR221C	NUT2	Q06213	157 aa		8.38	□□□□□ -1.07
RSA3	YLR221C	Q0182	Q9ZZW1	134 aa		8.38	□□□□□ -1.07
RSA3	YLR221C	ISC10	P32645	267 aa		8.37	□□□□□ -1.07
RSA3	YLR221C	THI12	P42883	340 aa		8.37	□□□□□ -1.07
RSA3	YLR221C	THI5	P43534	340 aa		8.37	□□□□□ -1.07
RSA3	YLR221C	CCT8	P47079	568 aa	Known RBP	8.37	□□□□□ -1.07
RSA3	YLR221C	THI11	P47183	340 aa		8.37	□□□□□ -1.07
RSA3	YLR221C	FOX2	Q02207	900 aa	Known RBP	8.37	□□□□□ -1.07
RSA3	YLR221C	THI13	Q07748	340 aa		8.37	□□□□□ -1.07
RSA3	YLR221C	RGP1	P16664	663 aa		8.36	□□□□□ -1.07
RSA3	YLR221C	TY1A-DR2	Q03964	440 aa	Known RBP	8.36	□□□□□ -1.07
RSA3	YLR221C	CAB1	Q04430	367 aa		8.36	□□□□□ -1.07
RSA3	YLR221C	POL32	P47110	350 aa		8.35	□□□□□ -1.07
RSA3	YLR221C	SCD5	P34758	872 aa		8.34	□□□□□ -1.07
RSA3	YLR221C	YMR187C	Q03236	431 aa		8.34	□□□□□ -1.07
RSA3	YLR221C	WHI5	Q12416	295 aa		8.34	□□□□□ -1.07
RSA3	YLR221C	FRT1	Q99332	602 aa		8.34	□□□□□ -1.07
RSA3	YLR221C	PDC5	P16467	563 aa	Known RBP	8.33	□□□□□ -1.08
RSA3	YLR221C	KNS1	P32350	737 aa	Predicted RBP	8.33	□□□□□ -1.08
RSA3	YLR221C	BOI1	P38041	980 aa	Known RBP	8.33	□□□□□ -1.08
RSA3	YLR221C	BOI2	P39969	1040 aa		8.33	□□□□□ -1.08
RSA3	YLR221C	PAM1	P37304	830 aa	Known RBP	8.32	□□□□□ -1.08
RSA3	YLR221C	MCX1	P38323	520 aa	Predicted RBP	8.32	□□□□□ -1.08
RSA3	YLR221C	MSC7	P38694	644 aa		8.32	□□□□□ -1.08
RSA3	YLR221C	SKN7	P38889	622 aa		8.32	□□□□□ -1.08
RSA3	YLR221C	TRS120	Q04183	1289 aa		8.32	□□□□□ -1.08
RSA3	YLR221C	APC11	Q12157	165 aa		8.32	□□□□□ -1.08
RSA3	YLR221C	RPP1A	P05318	106 aa	Predicted RBP	8.31	□□□□□ -1.08
RSA3	YLR221C	HXT5	P38695	592 aa		8.31	□□□□□ -1.08
RSA3	YLR221C	UFD2	P54860	961 aa		8.31	□□□□□ -1.08
RSA3	YLR221C	RRP15	Q06511	250 aa	Predicted RBP	8.31	□□□□□ -1.08
RSA3	YLR221C	MRPL33	P20084	86 aa		8.3	□□□□□ -1.08
RSA3	YLR221C	MGE1	P38523	228 aa		8.3	□□□□□ -1.08
RSA3	YLR221C	MET10	P39692	1035 aa		8.3	□□□□□ -1.08
RSA3	YLR221C	MET1	P36150	593 aa		8.29	□□□□□ -1.08
RSA3	YLR221C	MTO1	P53070	669 aa		8.29	□□□□□ -1.08
RSA3	YLR221C	ATE1	P16639	503 aa		8.28	□□□□□ -1.08
RSA3	YLR221C	UTP4	Q06679	776 aa	Known RBP	8.28	□□□□□ -1.08
RSA3	YLR221C	RPB10	P22139	70 aa		8.26	□□□□□ -1.09
RSA3	YLR221C	MET4	P32389	672 aa		8.26	□□□□□ -1.09
RSA3	YLR221C	YCK2	P23292	546 aa	Known RBP	8.25	□□□□□ -1.09
RSA3	YLR221C	SUT1	P53032	299 aa	Known RBP	8.25	□□□□□ -1.09
RSA3	YLR221C	SVF1	Q05515	481 aa		8.25	□□□□□ -1.09
RSA3	YLR221C	YDR215C	Q12240	137 aa		8.24	□□□□□ -1.09
RSA3	YLR221C	VMA3	P25515	160 aa		8.23	□□□□□ -1.09
RSA3	YLR221C	SMC1	P32908	1225 aa		8.23	□□□□□ -1.09
RSA3	YLR221C	GCD6	P32501	712 aa	Known RBP	8.22	□□□□□ -1.09
RSA3	YLR221C	LDH1	P38139	375 aa		8.22	□□□□□ -1.09
RSA3	YLR221C	SLN1	P39928	1220 aa	Predicted RBP	8.22	□□□□□ -1.09
RSA3	YLR221C	HXT8	P40886	569 aa		8.22	□□□□□ -1.09
RSA3	YLR221C	YJR107W	P47145	328 aa		8.22	□□□□□ -1.09
RSA3	YLR221C	HEH2	Q03281	663 aa		8.22	□□□□□ -1.09
RSA3	YLR221C	SEC8	P32855	1065 aa		8.21	□□□□□ -1.1
RSA3	YLR221C	DYS1	P38791	387 aa		8.21	□□□□□ -1.1
RSA3	YLR221C	SKP1	P52286	194 aa		8.21	□□□□□ -1.1
RSA3	YLR221C	CUS1	Q02554	436 aa	Predicted RBP	8.21	□□□□□ -1.1
RSA3	YLR221C	OYE2	Q03558	400 aa	Known RBP	8.21	□□□□□ -1.1
RSA3	YLR221C	AIM44	Q99299	758 aa		8.21	□□□□□ -1.1
RSA3	YLR221C	KAP122	P32767	1081 aa		8.2	□□□□□ -1.1
RSA3	YLR221C	NCL1	P38205	684 aa	Known RBP	8.2	□□□□□ -1.1
RSA3	YLR221C	GPI13	Q07830	1017 aa		8.2	□□□□□ -1.1
RSA3	YLR221C	MNL2	Q12205	849 aa		8.2	□□□□□ -1.1
RSA3	YLR221C	PHO4	P07270	312 aa	Known RBP	8.19	□□□□□ -1.1
RSA3	YLR221C	SBP1	P10080	294 aa	Known RBP	8.19	□□□□□ -1.1
RSA3	YLR221C	KTR2	P33550	425 aa		8.19	□□□□□ -1.1
RSA3	YLR221C	PRK1	P40494	810 aa		8.19	□□□□□ -1.1
RSA3	YLR221C	YNL011C	P53980	444 aa		8.19	□□□□□ -1.1
RSA3	YLR221C	CDC55	Q00362	526 aa		8.19	□□□□□ -1.1
RSA3	YLR221C	NAP1	P25293	417 aa	Known RBP	8.18	□□□□□ -1.1

Retrieved 100 of 5,963 RNA–protein pairs in 28.1 ms