RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C TY1B-ML2Q03434 1755 aaKnown RBP5.69□□□□□ -1.5
SDO1YLR022C TY1B-ER1Q03612 1755 aa5.69□□□□□ -1.5
SDO1YLR022C TY1B-ML1Q04711 1755 aaKnown RBP5.69□□□□□ -1.5
SDO1YLR022C TY1B-GR2Q12269 1755 aa5.69□□□□□ -1.5
SDO1YLR022C TY1B-OLQ12273 1755 aa5.69□□□□□ -1.5
SDO1YLR022C TY1B-PLQ12414 1755 aaKnown RBP5.69□□□□□ -1.5
SDO1YLR022C BIM1P40013 344 aa5.68□□□□□ -1.5
SDO1YLR022C ATG3P40344 310 aa5.68□□□□□ -1.5
SDO1YLR022C UTP13Q05946 817 aaKnown RBP5.68□□□□□ -1.5
SDO1YLR022C NUP170P38181 1502 aa5.68□□□□□ -1.5
SDO1YLR022C SLX8P40072 274 aa5.67□□□□□ -1.5
SDO1YLR022C ATG32P40458 529 aa5.67□□□□□ -1.5
SDO1YLR022C SUM1P46676 1062 aa5.67□□□□□ -1.5
SDO1YLR022C TY2B-BQ12491 1770 aa5.66□□□□□ -1.5
SDO1YLR022C SHM1P37292 490 aaPredicted RBP5.66□□□□□ -1.5
SDO1YLR022C JJJ2P46997 583 aa5.66□□□□□ -1.5
SDO1YLR022C NTE1Q04958 1679 aa5.66□□□□□ -1.5
SDO1YLR022C TOP2P06786 1428 aaKnown RBP5.65□□□□□ -1.5
SDO1YLR022C TIF1P10081 395 aaKnown RBP5.65□□□□□ -1.5
SDO1YLR022C DMA2P53924 522 aa5.65□□□□□ -1.5
SDO1YLR022C CBC2Q08920 208 aaKnown RBP RIP-Chip data5.65□□□□□ -1.5not detected
SDO1YLR022C RDS2P19541 446 aaKnown RBP5.64□□□□□ -1.51
SDO1YLR022C IRE1P32361 1115 aa5.64□□□□□ -1.51
SDO1YLR022C MCX1P38323 520 aaPredicted RBP5.64□□□□□ -1.51
SDO1YLR022C MRX10Q05648 414 aa5.64□□□□□ -1.51
SDO1YLR022C YDR461C-AQ2V2P7 80 aa5.64□□□□□ -1.51
SDO1YLR022C RPL34BP40525 121 aaKnown RBP5.63□□□□□ -1.51
SDO1YLR022C ENO1P00924 437 aaKnown RBP5.62□□□□□ -1.51
SDO1YLR022C YNR014WP53719 212 aa5.62□□□□□ -1.51
SDO1YLR022C SSN2P38931 1420 aa5.62□□□□□ -1.51
SDO1YLR022C YCK2P23292 546 aaKnown RBP5.61□□□□□ -1.51
SDO1YLR022C RTG2P32608 588 aaKnown RBP5.61□□□□□ -1.51
SDO1YLR022C PSH1Q12161 406 aa5.61□□□□□ -1.51
SDO1YLR022C GLT1Q12680 2145 aaKnown RBP5.6□□□□□ -1.51
SDO1YLR022C TY1B-DR3Q99231 1755 aa5.6□□□□□ -1.51
SDO1YLR022C SWI5P08153 709 aa5.6□□□□□ -1.51
SDO1YLR022C FPS1P23900 669 aa5.6□□□□□ -1.51
SDO1YLR022C PDC6P26263 563 aaKnown RBP5.6□□□□□ -1.51
SDO1YLR022C MRPL16P38064 232 aa5.6□□□□□ -1.51
SDO1YLR022C AMN1P38285 549 aaPredicted RBP5.6□□□□□ -1.51
SDO1YLR022C STB3Q12427 513 aa5.6□□□□□ -1.51
SDO1YLR022C DOP1Q03921 1698 aa5.59□□□□□ -1.51
SDO1YLR022C GPM1P00950 247 aaKnown RBP5.58□□□□□ -1.52
SDO1YLR022C PEP12P32854 288 aa5.58□□□□□ -1.52
SDO1YLR022C AIM9P40053 627 aaKnown RBP5.58□□□□□ -1.52
SDO1YLR022C SPP41P38904 1435 aa5.57□□□□□ -1.52
SDO1YLR022C IRC24P40580 263 aa5.57□□□□□ -1.52
SDO1YLR022C YPQ2Q06328 317 aa5.57□□□□□ -1.52
SDO1YLR022C YDR215CQ12240 137 aa5.57□□□□□ -1.52
SDO1YLR022C SPO14P36126 1683 aa5.56□□□□□ -1.52
SDO1YLR022C RPS31P05759 152 aaKnown RBP5.56□□□□□ -1.52
SDO1YLR022C SIS2P36024 562 aa5.56□□□□□ -1.52
SDO1YLR022C RPO21P04050 1733 aaKnown RBP5.56□□□□□ -1.52
SDO1YLR022C PDR15Q04182 1529 aaKnown RBP5.55□□□□□ -1.52
SDO1YLR022C MAC1P35192 417 aa5.55□□□□□ -1.52
SDO1YLR022C YNL165WP53891 406 aa5.55□□□□□ -1.52
SDO1YLR022C TY1B-JR2P47100 1755 aaKnown RBP5.55□□□□□ -1.52
SDO1YLR022C TY1B-ER2Q03619 1755 aa5.55□□□□□ -1.52
SDO1YLR022C TY1B-MR1Q04214 1755 aa5.55□□□□□ -1.52
SDO1YLR022C TY1B-MR2Q04670 1755 aaKnown RBP5.55□□□□□ -1.52
SDO1YLR022C TY1B-LR1Q12088 1755 aaKnown RBP5.55□□□□□ -1.52
SDO1YLR022C TY1B-NL1Q12112 1755 aa5.55□□□□□ -1.52
SDO1YLR022C TY1B-GR1Q12141 1755 aa5.55□□□□□ -1.52
SDO1YLR022C TY1B-BLQ12490 1755 aa5.55□□□□□ -1.52
SDO1YLR022C RPS6AP0CX37 236 aaKnown RBP5.54□□□□□ -1.52
SDO1YLR022C RPS6BP0CX38 236 aaPredicted RBP5.54□□□□□ -1.52
SDO1YLR022C BOI2P39969 1040 aa5.54□□□□□ -1.52
SDO1YLR022C LSB6P42951 607 aa5.54□□□□□ -1.52
SDO1YLR022C ULS1Q08562 1619 aa5.53□□□□□ -1.52
SDO1YLR022C PDI1P17967 522 aaKnown RBP5.53□□□□□ -1.52
SDO1YLR022C SPR3P41901 512 aa5.53□□□□□ -1.52
SDO1YLR022C YFL034WP43564 1073 aa5.53□□□□□ -1.52
SDO1YLR022C TSC11P40061 1430 aa5.53□□□□□ -1.52
SDO1YLR022C TRM3Q07527 1436 aa5.53□□□□□ -1.52
SDO1YLR022C NTH2P35172 780 aa5.52□□□□□ -1.53
SDO1YLR022C SLN1P39928 1220 aaPredicted RBP5.52□□□□□ -1.53
SDO1YLR022C VTH1P40438 1549 aa5.52□□□□□ -1.53
SDO1YLR022C VTH2P40890 1549 aa5.52□□□□□ -1.53
SDO1YLR022C SNT2P53127 1403 aa5.51□□□□□ -1.53
SDO1YLR022C PDC5P16467 563 aaKnown RBP5.51□□□□□ -1.53
SDO1YLR022C MET10P39692 1035 aa5.51□□□□□ -1.53
SDO1YLR022C ALD2P47771 506 aa5.51□□□□□ -1.53
SDO1YLR022C MCA1Q08601 432 aa5.51□□□□□ -1.53
SDO1YLR022C TSC13Q99190 310 aa5.51□□□□□ -1.53
SDO1YLR022C MLF3P32047 452 aa5.5□□□□□ -1.53
SDO1YLR022C TY1A-DR2Q03964 440 aaKnown RBP5.5□□□□□ -1.53
SDO1YLR022C DNF3Q12674 1656 aa5.5□□□□□ -1.53
SDO1YLR022C LEU1P07264 779 aaKnown RBP5.49□□□□□ -1.53
SDO1YLR022C KNS1P32350 737 aaPredicted RBP5.49□□□□□ -1.53
SDO1YLR022C TTI1P36097 1038 aa5.49□□□□□ -1.53
SDO1YLR022C PDR10P51533 1564 aa5.49□□□□□ -1.53
SDO1YLR022C MCM1P11746 286 aa5.48□□□□□ -1.53
SDO1YLR022C PHO87P25360 923 aa5.48□□□□□ -1.53
SDO1YLR022C YTA6P40328 754 aa5.48□□□□□ -1.53
SDO1YLR022C Q0182Q9ZZW1 134 aa5.48□□□□□ -1.53
SDO1YLR022C SMC4Q12267 1418 aa5.48□□□□□ -1.53
SDO1YLR022C MSC7P38694 644 aa5.47□□□□□ -1.53
SDO1YLR022C KTR7P40504 517 aa5.47□□□□□ -1.53
SDO1YLR022C ACS2P52910 683 aaKnown RBP5.47□□□□□ -1.53
SDO1YLR022C YPL034WQ03083 165 aa5.47□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 33.5 ms